RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 LENG8Q96PV6 779 aaPredicted RBP14.42□□□□□ -0.1
SHMT2-210ENST00000553950 SLC17A9Q9BYT1 436 aa14.42□□□□□ -0.1
SHMT2-210ENST00000553950 ABCG8Q9H221 673 aa14.42□□□□□ -0.1
SHMT2-210ENST00000553950 CCDC68Q9H2F9 335 aa14.42□□□□□ -0.1
SHMT2-210ENST00000553950 C2orf42Q9NWW7 574 aa14.42□□□□□ -0.1
SHMT2-210ENST00000553950 FBXO5Q9UKT4 447 aa14.42□□□□□ -0.1
SHMT2-210ENST00000553950 COMMD10Q9Y6G5 202 aa14.42□□□□□ -0.1
SHMT2-210ENST00000553950 CACNA1IQ9P0X4 2223 aa14.41□□□□□ -0.1
SHMT2-210ENST00000553950 IQANK1A0A1B0GTG1 560 aa14.41□□□□□ -0.1
SHMT2-210ENST00000553950 AGAP14A8MT82 685 aa14.41□□□□□ -0.1
SHMT2-210ENST00000553950 H3BMM5 538 aa14.41□□□□□ -0.1
SHMT2-210ENST00000553950 CCL22O00626 93 aa14.41□□□□□ -0.1
SHMT2-210ENST00000553950 RASGRF2O14827 1237 aa14.41□□□□□ -0.1
SHMT2-210ENST00000553950 LATO43561 262 aa14.41□□□□□ -0.1
SHMT2-210ENST00000553950 PI15O43692 258 aa14.41□□□□□ -0.1
SHMT2-210ENST00000553950 NDUFS3O75489 264 aa14.41□□□□□ -0.1
SHMT2-210ENST00000553950 KRT37O76014 449 aa14.41□□□□□ -0.1
SHMT2-210ENST00000553950 MYZAPP0CAP1 466 aa14.41□□□□□ -0.1
SHMT2-210ENST00000553950 ZNF7P17097 686 aaPredicted RBP14.41□□□□□ -0.1
SHMT2-210ENST00000553950 ACRV1P26436 265 aa14.41□□□□□ -0.1
SHMT2-210ENST00000553950 SPRP35270 261 aaPredicted RBP14.41□□□□□ -0.1
SHMT2-210ENST00000553950 PTGER3P43115 390 aa14.41□□□□□ -0.1
SHMT2-210ENST00000553950 GPR1P46091 355 aa14.41□□□□□ -0.1
SHMT2-210ENST00000553950 CD151P48509 253 aa14.41□□□□□ -0.1
SHMT2-210ENST00000553950 ADARP55265 1226 aaKnown RBP14.41□□□□□ -0.1
SHMT2-210ENST00000553950 PTPRCAPQ14761 206 aa14.41□□□□□ -0.1
SHMT2-210ENST00000553950 CHRNA6Q15825 494 aa14.41□□□□□ -0.1
SHMT2-210ENST00000553950 KRT71Q3SY84 523 aa14.41□□□□□ -0.1
SHMT2-210ENST00000553950 GRTP1Q5TC63 336 aa14.41□□□□□ -0.1
SHMT2-210ENST00000553950 SEL1L3Q68CR1 1132 aa14.41□□□□□ -0.1
SHMT2-210ENST00000553950 ADAMTSL4Q6UY14 1074 aa14.41□□□□□ -0.1
SHMT2-210ENST00000553950 PACS1Q6VY07 963 aa14.41□□□□□ -0.1
SHMT2-210ENST00000553950 TAS2R42Q7RTR8 314 aa14.41□□□□□ -0.1
SHMT2-210ENST00000553950 LONP2Q86WA8 852 aa14.41□□□□□ -0.1
SHMT2-210ENST00000553950 IQCKQ8N0W5 287 aa14.41□□□□□ -0.1
SHMT2-210ENST00000553950 NXPE1Q8N323 547 aa14.41□□□□□ -0.1
SHMT2-210ENST00000553950 DDHD1Q8NEL9 900 aa14.41□□□□□ -0.1
SHMT2-210ENST00000553950 UHMK1Q8TAS1 419 aaKnown RBP14.41□□□□□ -0.1
SHMT2-210ENST00000553950 GLYATL1Q969I3 302 aa14.41□□□□□ -0.1
SHMT2-210ENST00000553950 ZIM3Q96PE6 472 aa14.41□□□□□ -0.1
SHMT2-210ENST00000553950 COPS8Q99627 209 aa14.41□□□□□ -0.1
SHMT2-210ENST00000553950 RIOK2Q9BVS4 552 aaKnown RBP14.41□□□□□ -0.1
SHMT2-210ENST00000553950 TSSK1BQ9BXA7 367 aa14.41□□□□□ -0.1
SHMT2-210ENST00000553950 RHOJQ9H4E5 214 aa14.41□□□□□ -0.1
SHMT2-210ENST00000553950 CD84Q9UIB8 345 aa14.41□□□□□ -0.1
SHMT2-210ENST00000553950 ZFR2Q9UPR6 939 aaKnown RBP14.41□□□□□ -0.1
SHMT2-210ENST00000553950 COQ6Q9Y2Z9 468 aa14.41□□□□□ -0.1
SHMT2-210ENST00000553950 PCDHB1Q9Y5F3 818 aa14.41□□□□□ -0.1
SHMT2-210ENST00000553950 ZDBF2Q9HCK1 2354 aa14.41□□□□□ -0.1
SHMT2-210ENST00000553950 SPAG17Q6Q759 2223 aa14.41□□□□□ -0.1
SHMT2-210ENST00000553950 TTC28Q96AY4 2481 aa14.4□□□□□ -0.1
SHMT2-210ENST00000553950 GPR89AB7ZAQ6 455 aa14.4□□□□□ -0.1
SHMT2-210ENST00000553950 POC1B-GALNT4F8VUJ3 575 aa14.4□□□□□ -0.1
SHMT2-210ENST00000553950 GAPDHSO14556 408 aaPredicted RBP14.4□□□□□ -0.1
SHMT2-210ENST00000553950 OPA1O60313 960 aa14.4□□□□□ -0.1
SHMT2-210ENST00000553950 C1QAP02745 245 aa14.4□□□□□ -0.1
SHMT2-210ENST00000553950 GPR89BP0CG08 455 aa14.4□□□□□ -0.1
SHMT2-210ENST00000553950 GM2AP17900 193 aa14.4□□□□□ -0.1
SHMT2-210ENST00000553950 LEPRP48357 1165 aaKnown RBP14.4□□□□□ -0.1
SHMT2-210ENST00000553950 POLD2P49005 469 aa14.4□□□□□ -0.1
SHMT2-210ENST00000553950 LIMK2P53671 638 aa14.4□□□□□ -0.1
SHMT2-210ENST00000553950 PPP2CBP62714 309 aa14.4□□□□□ -0.1
SHMT2-210ENST00000553950 PPP2CAP67775 309 aa14.4□□□□□ -0.1
SHMT2-210ENST00000553950 ZNF844Q08AG5 666 aa14.4□□□□□ -0.1
SHMT2-210ENST00000553950 DNAJC3Q13217 504 aa14.4□□□□□ -0.1
SHMT2-210ENST00000553950 ZNF528Q3MIS6 628 aa14.4□□□□□ -0.1
SHMT2-210ENST00000553950 STRA8Q7Z7C7 330 aa14.4□□□□□ -0.1
SHMT2-210ENST00000553950 TMEM105Q8N8V8 129 aa14.4□□□□□ -0.1
SHMT2-210ENST00000553950 BTN2A2Q8WVV5 523 aa14.4□□□□□ -0.1
SHMT2-210ENST00000553950 DCUN1D1Q96GG9 259 aa14.4□□□□□ -0.1
SHMT2-210ENST00000553950 RBBP8Q99708 897 aa14.4□□□□□ -0.1
SHMT2-210ENST00000553950 DHRS4Q9BTZ2 278 aa14.4□□□□□ -0.1
SHMT2-210ENST00000553950 WDR26Q9H7D7 661 aa14.4□□□□□ -0.1
SHMT2-210ENST00000553950 SUDS3Q9H7L9 328 aaPredicted RBP14.4□□□□□ -0.1
SHMT2-210ENST00000553950 PHPT1Q9NRX4 125 aaPredicted RBP14.4□□□□□ -0.1
SHMT2-210ENST00000553950 ZDHHC3Q9NYG2 299 aa14.4□□□□□ -0.1
SHMT2-210ENST00000553950 IL1RAPL1Q9NZN1 696 aa14.4□□□□□ -0.1
SHMT2-210ENST00000553950 GNPTGQ9UJJ9 305 aa14.4□□□□□ -0.1
SHMT2-210ENST00000553950 DOCK9Q9BZ29 2069 aa14.4□□□□□ -0.1
SHMT2-210ENST00000553950 A0A0U1RQS6 177 aa14.39□□□□□ -0.11
SHMT2-210ENST00000553950 OR51F1A6NGY5 319 aa14.39□□□□□ -0.11
SHMT2-210ENST00000553950 MEI4A8MW99 385 aa14.39□□□□□ -0.11
SHMT2-210ENST00000553950 C10orf142B7Z368 130 aa14.39□□□□□ -0.11
SHMT2-210ENST00000553950 GOLGA8KD6RF30 607 aa14.39□□□□□ -0.11
SHMT2-210ENST00000553950 PRAMEF26H0Y7S4 382 aa14.39□□□□□ -0.11
SHMT2-210ENST00000553950 GOLGA8TH3BQL2 631 aa14.39□□□□□ -0.11
SHMT2-210ENST00000553950 MAP2K7O14733 419 aa14.39□□□□□ -0.11
SHMT2-210ENST00000553950 FPGTO14772 594 aa14.39□□□□□ -0.11
SHMT2-210ENST00000553950 ESR1P03372 595 aa14.39□□□□□ -0.11
SHMT2-210ENST00000553950 SHBGP04278 402 aa14.39□□□□□ -0.11
SHMT2-210ENST00000553950 PCCBP05166 539 aa14.39□□□□□ -0.11
SHMT2-210ENST00000553950 KELP23276 732 aa14.39□□□□□ -0.11
SHMT2-210ENST00000553950 RPS3P23396 243 aaKnown RBP eCLIP14.39□□□□□ -0.118e-7■■■■□ 20.3
SHMT2-210ENST00000553950 AKT1P31749 480 aa14.39□□□□□ -0.11
SHMT2-210ENST00000553950 CNR2P34972 360 aa14.39□□□□□ -0.11
SHMT2-210ENST00000553950 NSG1P42857 185 aa14.39□□□□□ -0.11
SHMT2-210ENST00000553950 RPL6Q02878 288 aaKnown RBP14.39□□□□□ -0.11
SHMT2-210ENST00000553950 GTF2H3Q13889 308 aa14.39□□□□□ -0.11
SHMT2-210ENST00000553950 EFTUD2Q15029 972 aaKnown RBP eCLIP14.39□□□□□ -0.118e-9■■■■■ 30.8
SHMT2-210ENST00000553950 IRF4Q15306 451 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms