RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 PCDHGB7Q9Y5F8 929 aa8.98□□□□□ -0.97
PRKCH-208ENST00000553846 FHOD1Q9Y613 1164 aa8.98□□□□□ -0.97
PRKCH-208ENST00000553846 ADGRG1Q9Y653 693 aa8.98□□□□□ -0.97
PRKCH-208ENST00000553846 SLC30A1Q9Y6M5 507 aa8.98□□□□□ -0.97
PRKCH-208ENST00000553846 PKDREJQ9NTG1 2253 aa8.98□□□□□ -0.97
PRKCH-208ENST00000553846 TTC24A2A3L6 582 aaPredicted RBP8.97□□□□□ -0.97
PRKCH-208ENST00000553846 FGF10O15520 208 aaPredicted RBP8.97□□□□□ -0.97
PRKCH-208ENST00000553846 KATNA1O75449 491 aa8.97□□□□□ -0.97
PRKCH-208ENST00000553846 PTGIRP43119 386 aa8.97□□□□□ -0.97
PRKCH-208ENST00000553846 LEPRP48357 1165 aaKnown RBP8.97□□□□□ -0.97
PRKCH-208ENST00000553846 PAPOLAP51003 745 aaKnown RBP8.97□□□□□ -0.97
PRKCH-208ENST00000553846 BPIFB4P59827 614 aa8.97□□□□□ -0.97
PRKCH-208ENST00000553846 FMO1Q01740 532 aa8.97□□□□□ -0.97
PRKCH-208ENST00000553846 TRAF2Q12933 501 aa8.97□□□□□ -0.97
PRKCH-208ENST00000553846 CHRNA6Q15825 494 aa8.97□□□□□ -0.97
PRKCH-208ENST00000553846 ZNF765Q7L2R6 523 aa8.97□□□□□ -0.97
PRKCH-208ENST00000553846 SLFN11Q7Z7L1 901 aa8.97□□□□□ -0.97
PRKCH-208ENST00000553846 NLRP8Q86W28 1048 aa8.97□□□□□ -0.97
PRKCH-208ENST00000553846 ZNF354CQ86Y25 554 aa8.97□□□□□ -0.97
PRKCH-208ENST00000553846 PLXDC1Q8IUK5 500 aa8.97□□□□□ -0.97
PRKCH-208ENST00000553846 TP53INP2Q8IXH6 220 aa8.97□□□□□ -0.97
PRKCH-208ENST00000553846 PGBD5Q8N414 524 aa8.97□□□□□ -0.97
PRKCH-208ENST00000553846 SLC20A1Q8WUM9 679 aa8.97□□□□□ -0.97
PRKCH-208ENST00000553846 SNRNP40Q96DI7 357 aaKnown RBP8.97□□□□□ -0.97
PRKCH-208ENST00000553846 CELF6Q96J87 481 aaKnown RBP8.97□□□□□ -0.97
PRKCH-208ENST00000553846 C5orf34Q96MH7 638 aa8.97□□□□□ -0.97
PRKCH-208ENST00000553846 OR6C1Q96RD1 312 aa8.97□□□□□ -0.97
PRKCH-208ENST00000553846 WDR24Q96S15 920 aa8.97□□□□□ -0.97
PRKCH-208ENST00000553846 SMAD5Q99717 465 aaKnown RBP8.97□□□□□ -0.97
PRKCH-208ENST00000553846 HERPUD2Q9BSE4 406 aa8.97□□□□□ -0.97
PRKCH-208ENST00000553846 SLC29A3Q9BZD2 475 aa8.97□□□□□ -0.97
PRKCH-208ENST00000553846 ING2Q9H160 280 aa8.97□□□□□ -0.97
PRKCH-208ENST00000553846 ABCG8Q9H221 673 aa8.97□□□□□ -0.97
PRKCH-208ENST00000553846 VPS18Q9P253 973 aa8.97□□□□□ -0.97
PRKCH-208ENST00000553846 CPNE7Q9UBL6 633 aa8.97□□□□□ -0.97
PRKCH-208ENST00000553846 PADI1Q9ULC6 663 aa8.97□□□□□ -0.97
PRKCH-208ENST00000553846 ZNF451Q9Y4E5 1061 aa8.97□□□□□ -0.97
PRKCH-208ENST00000553846 KIR2DS5A0A0G2JLQ3 304 aa8.96□□□□□ -0.98
PRKCH-208ENST00000553846 A0A0G2JNG1 304 aa8.96□□□□□ -0.98
PRKCH-208ENST00000553846 F8VZ95 297 aa8.96□□□□□ -0.98
PRKCH-208ENST00000553846 KIR2DS3K7RE56 304 aa8.96□□□□□ -0.98
PRKCH-208ENST00000553846 INPP4BO15327 924 aa8.96□□□□□ -0.98
PRKCH-208ENST00000553846 CCP110O43303 1012 aa8.96□□□□□ -0.98
PRKCH-208ENST00000553846 HNRNPRO43390 633 aaKnown RBP8.96□□□□□ -0.98
PRKCH-208ENST00000553846 KIF1CO43896 1103 aaKnown RBP8.96□□□□□ -0.98
PRKCH-208ENST00000553846 PALMO75781 387 aa8.96□□□□□ -0.98
PRKCH-208ENST00000553846 F3P13726 295 aa8.96□□□□□ -0.98
PRKCH-208ENST00000553846 LPOP22079 712 aaPredicted RBP8.96□□□□□ -0.98
PRKCH-208ENST00000553846 VARSP26640 1264 aaKnown RBP8.96□□□□□ -0.98
PRKCH-208ENST00000553846 PTPN4P29074 926 aa8.96□□□□□ -0.98
PRKCH-208ENST00000553846 CASP14P31944 242 aa8.96□□□□□ -0.98
PRKCH-208ENST00000553846 HTR7P34969 479 aa8.96□□□□□ -0.98
PRKCH-208ENST00000553846 FOXM1Q08050 763 aa8.96□□□□□ -0.98
PRKCH-208ENST00000553846 IHHQ14623 411 aa8.96□□□□□ -0.98
PRKCH-208ENST00000553846 RFTN1Q14699 578 aaPredicted RBP8.96□□□□□ -0.98
PRKCH-208ENST00000553846 KIR2DS5Q14953 304 aa8.96□□□□□ -0.98
PRKCH-208ENST00000553846 MIIPQ5JXC2 388 aa8.96□□□□□ -0.98
PRKCH-208ENST00000553846 PPP1R15BQ5SWA1 713 aa8.96□□□□□ -0.98
PRKCH-208ENST00000553846 PWWP2BQ6NUJ5 590 aa8.96□□□□□ -0.98
PRKCH-208ENST00000553846 WDR59Q6PJI9 974 aa8.96□□□□□ -0.98
PRKCH-208ENST00000553846 CYP4V2Q6ZWL3 525 aaPredicted RBP8.96□□□□□ -0.98
PRKCH-208ENST00000553846 MARK2Q7KZI7 788 aaKnown RBP8.96□□□□□ -0.98
PRKCH-208ENST00000553846 SYVN1Q86TM6 617 aa8.96□□□□□ -0.98
PRKCH-208ENST00000553846 HPS6Q86YV9 775 aa8.96□□□□□ -0.98
PRKCH-208ENST00000553846 GALNT13Q8IUC8 556 aa8.96□□□□□ -0.98
PRKCH-208ENST00000553846 GLIS1Q8NBF1 620 aa8.96□□□□□ -0.98
PRKCH-208ENST00000553846 TTC13Q8NBP0 860 aa8.96□□□□□ -0.98
PRKCH-208ENST00000553846 FDCSPQ8NFU4 85 aa8.96□□□□□ -0.98
PRKCH-208ENST00000553846 PIH1D2Q8WWB5 315 aa8.96□□□□□ -0.98
PRKCH-208ENST00000553846 SEC14L1Q92503 715 aa8.96□□□□□ -0.98
PRKCH-208ENST00000553846 INPP5DQ92835 1189 aa8.96□□□□□ -0.98
PRKCH-208ENST00000553846 SCAMP4Q969E2 229 aa8.96□□□□□ -0.98
PRKCH-208ENST00000553846 SH3KBP1Q96B97 665 aa8.96□□□□□ -0.98
PRKCH-208ENST00000553846 SCRN2Q96FV2 425 aa8.96□□□□□ -0.98
PRKCH-208ENST00000553846 SLC41A2Q96JW4 573 aa8.96□□□□□ -0.98
PRKCH-208ENST00000553846 PLEKHG4BQ96PX9 1271 aa8.96□□□□□ -0.98
PRKCH-208ENST00000553846 SMIM14Q96QK8 99 aa8.96□□□□□ -0.98
PRKCH-208ENST00000553846 MGME1Q9BQP7 344 aa8.96□□□□□ -0.98
PRKCH-208ENST00000553846 GPR87Q9BY21 358 aa8.96□□□□□ -0.98
PRKCH-208ENST00000553846 ZMYND15Q9H091 742 aa8.96□□□□□ -0.98
PRKCH-208ENST00000553846 CATSPERBQ9H7T0 1116 aa8.96□□□□□ -0.98
PRKCH-208ENST00000553846 ASF1BQ9NVP2 202 aa8.96□□□□□ -0.98
PRKCH-208ENST00000553846 SCHIP1Q9P0W5 487 aaPredicted RBP8.96□□□□□ -0.98
PRKCH-208ENST00000553846 LNPEPQ9UIQ6 1025 aa8.96□□□□□ -0.98
PRKCH-208ENST00000553846 NTNG1Q9Y2I2 539 aa8.96□□□□□ -0.98
PRKCH-208ENST00000553846 PRKAB1Q9Y478 270 aa8.96□□□□□ -0.98
PRKCH-208ENST00000553846 PCDHGC4Q9Y5F7 938 aa8.96□□□□□ -0.98
PRKCH-208ENST00000553846 PCM1Q15154 2024 aa8.96□□□□□ -0.98
PRKCH-208ENST00000553846 ANKHD1Q8IWZ3 2542 aaKnown RBP8.96□□□□□ -0.98
PRKCH-208ENST00000553846 ABCA2Q9BZC7 2435 aa8.95□□□□□ -0.98
PRKCH-208ENST00000553846 FER1L5A0AVI2 2057 aa8.95□□□□□ -0.98
PRKCH-208ENST00000553846 SPTBP11277 2137 aa8.95□□□□□ -0.98
PRKCH-208ENST00000553846 SEC16AO15027 2179 aa8.95□□□□□ -0.98
PRKCH-208ENST00000553846 A0A1W2PQ67 120 aa8.95□□□□□ -0.98
PRKCH-208ENST00000553846 SSU72P8A0A1W2PR75 194 aa8.95□□□□□ -0.98
PRKCH-208ENST00000553846 ARGFXA6NJG6 315 aa8.95□□□□□ -0.98
PRKCH-208ENST00000553846 E2F3O00716 465 aa8.95□□□□□ -0.98
PRKCH-208ENST00000553846 CREB3O43889 395 aa8.95□□□□□ -0.98
PRKCH-208ENST00000553846 FZD6O60353 706 aa8.95□□□□□ -0.98
PRKCH-208ENST00000553846 DPM1O60762 260 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms