RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 PRR11Q96HE9 360 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-223ENST00000553686 ZBTB45Q96K62 511 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-223ENST00000553686 SLAMF7Q9NQ25 335 aa6.08□□□□□ -1.44
ATXN3-223ENST00000553686 KMT5AQ9NQR1 393 aa6.08□□□□□ -1.44
ATXN3-223ENST00000553686 CTTNBP2NLQ9P2B4 639 aa6.08□□□□□ -1.44
ATXN3-223ENST00000553686 LRWD1Q9UFC0 647 aa6.08□□□□□ -1.44
ATXN3-223ENST00000553686 GTF3C4Q9UKN8 822 aa6.08□□□□□ -1.44
ATXN3-223ENST00000553686 PHTF1Q9UMS5 762 aa6.08□□□□□ -1.44
ATXN3-223ENST00000553686 SLC27A6Q9Y2P4 619 aa6.08□□□□□ -1.44
ATXN3-223ENST00000553686 DERAQ9Y315 318 aa6.08□□□□□ -1.44
ATXN3-223ENST00000553686 NEU2Q9Y3R4 380 aa6.08□□□□□ -1.44
ATXN3-223ENST00000553686 F8P00451 2351 aa6.08□□□□□ -1.44
ATXN3-223ENST00000553686 ICE1Q9Y2F5 2266 aa6.08□□□□□ -1.44
ATXN3-223ENST00000553686 ADAMTS9Q9P2N4 1935 aa6.07□□□□□ -1.44
ATXN3-223ENST00000553686 A0A1B0GVM2 712 aa6.07□□□□□ -1.44
ATXN3-223ENST00000553686 A0A1W2PR77 199 aa6.07□□□□□ -1.44
ATXN3-223ENST00000553686 NEMP2A6NFY4 417 aa6.07□□□□□ -1.44
ATXN3-223ENST00000553686 FAM47DPA6NHR8 397 aa6.07□□□□□ -1.44
ATXN3-223ENST00000553686 LRRC72A6NJI9 287 aa6.07□□□□□ -1.44
ATXN3-223ENST00000553686 SLC16A6O15403 523 aa6.07□□□□□ -1.44
ATXN3-223ENST00000553686 HUS1O60921 280 aa6.07□□□□□ -1.44
ATXN3-223ENST00000553686 WNT1P04628 370 aa6.07□□□□□ -1.44
ATXN3-223ENST00000553686 HMGB1P09429 215 aaKnown RBP6.07□□□□□ -1.44
ATXN3-223ENST00000553686 LIPCP11150 499 aa6.07□□□□□ -1.44
ATXN3-223ENST00000553686 SLC5A2P31639 672 aa6.07□□□□□ -1.44
ATXN3-223ENST00000553686 PNPLA4P41247 253 aa6.07□□□□□ -1.44
ATXN3-223ENST00000553686 LHX1P48742 406 aa6.07□□□□□ -1.44
ATXN3-223ENST00000553686 HK3P52790 923 aa6.07□□□□□ -1.44
ATXN3-223ENST00000553686 PSMC1P62191 440 aaKnown RBP6.07□□□□□ -1.44
ATXN3-223ENST00000553686 PIGFQ07326 219 aa6.07□□□□□ -1.44
ATXN3-223ENST00000553686 OVGP1Q12889 678 aa6.07□□□□□ -1.44
ATXN3-223ENST00000553686 HECTD3Q5T447 861 aa6.07□□□□□ -1.44
ATXN3-223ENST00000553686 SERPINA13PQ6UXR4 307 aa6.07□□□□□ -1.44
ATXN3-223ENST00000553686 TPGS1Q6ZTW0 290 aa6.07□□□□□ -1.44
ATXN3-223ENST00000553686 CATSPER3Q86XQ3 398 aa6.07□□□□□ -1.44
ATXN3-223ENST00000553686 CACUL1Q86Y37 369 aa6.07□□□□□ -1.44
ATXN3-223ENST00000553686 PDSS2Q86YH6 399 aa6.07□□□□□ -1.44
ATXN3-223ENST00000553686 TMEM86AQ8N2M4 240 aa6.07□□□□□ -1.44
ATXN3-223ENST00000553686 OR4C6Q8NH72 309 aa6.07□□□□□ -1.44
ATXN3-223ENST00000553686 C9orf43Q8TAL5 461 aaPredicted RBP6.07□□□□□ -1.44
ATXN3-223ENST00000553686 ERMNQ8TAM6 284 aa6.07□□□□□ -1.44
ATXN3-223ENST00000553686 GANCQ8TET4 914 aa6.07□□□□□ -1.44
ATXN3-223ENST00000553686 GOLGA1Q92805 767 aa6.07□□□□□ -1.44
ATXN3-223ENST00000553686 ATXN7L3BQ96GX2 97 aa6.07□□□□□ -1.44
ATXN3-223ENST00000553686 C1orf43Q9BWL3 253 aa6.07□□□□□ -1.44
ATXN3-223ENST00000553686 TTLL2Q9BWV7 592 aa6.07□□□□□ -1.44
ATXN3-223ENST00000553686 NACA2Q9H009 215 aa6.07□□□□□ -1.44
ATXN3-223ENST00000553686 C17orf75Q9HAS0 396 aa6.07□□□□□ -1.44
ATXN3-223ENST00000553686 TCF7L1Q9HCS4 588 aa6.07□□□□□ -1.44
ATXN3-223ENST00000553686 KCTD5Q9NXV2 234 aa6.07□□□□□ -1.44
ATXN3-223ENST00000553686 DDX43Q9NXZ2 648 aaKnown RBP6.07□□□□□ -1.44
ATXN3-223ENST00000553686 DDX56Q9NY93 547 aaKnown RBP6.07□□□□□ -1.44
ATXN3-223ENST00000553686 DONSONQ9NYP3 566 aa6.07□□□□□ -1.44
ATXN3-223ENST00000553686 SCML1Q9UN30 329 aa6.07□□□□□ -1.44
ATXN3-223ENST00000553686 TNRC6BQ9UPQ9 1833 aaKnown RBP6.06□□□□□ -1.44
ATXN3-223ENST00000553686 OTOGQ6ZRI0 2925 aa6.06□□□□□ -1.44
ATXN3-223ENST00000553686 PTPRJQ12913 1337 aa6.06□□□□□ -1.44
ATXN3-223ENST00000553686 SPG11Q96JI7 2443 aa6.06□□□□□ -1.44
ATXN3-223ENST00000553686 CCDC187A0A096LP49 1063 aa6.06□□□□□ -1.44
ATXN3-223ENST00000553686 WIPF3A6NGB9 483 aa6.06□□□□□ -1.44
ATXN3-223ENST00000553686 PRSS29PA6NIE9 313 aa6.06□□□□□ -1.44
ATXN3-223ENST00000553686 TMX2-CTNND1H3BSU7 103 aa6.06□□□□□ -1.44
ATXN3-223ENST00000553686 TCEA3O75764 348 aa6.06□□□□□ -1.44
ATXN3-223ENST00000553686 SUN1O94901 812 aa6.06□□□□□ -1.44
ATXN3-223ENST00000553686 FTLP02792 175 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-223ENST00000553686 IGHV4-34P06331 123 aa6.06□□□□□ -1.44
ATXN3-223ENST00000553686 ADRB2P07550 413 aa6.06□□□□□ -1.44
ATXN3-223ENST00000553686 KRT7P08729 469 aa6.06□□□□□ -1.44
ATXN3-223ENST00000553686 XBP1P17861 261 aa6.06□□□□□ -1.44
ATXN3-223ENST00000553686 MUTP22033 750 aa6.06□□□□□ -1.44
ATXN3-223ENST00000553686 ANXA11P50995 505 aaKnown RBP6.06□□□□□ -1.44
ATXN3-223ENST00000553686 POLE2P56282 527 aa6.06□□□□□ -1.44
ATXN3-223ENST00000553686 NOP14P78316 857 aaKnown RBP6.06□□□□□ -1.44
ATXN3-223ENST00000553686 MRPS35P82673 323 aaKnown RBP6.06□□□□□ -1.44
ATXN3-223ENST00000553686 GOLGA8FQ08AF8 430 aa6.06□□□□□ -1.44
ATXN3-223ENST00000553686 GOLGA8DPQ0D2H9 430 aa6.06□□□□□ -1.44
ATXN3-223ENST00000553686 KLRB1Q12918 225 aa6.06□□□□□ -1.44
ATXN3-223ENST00000553686 TAF10Q12962 218 aa6.06□□□□□ -1.44
ATXN3-223ENST00000553686 EIF3IQ13347 325 aaKnown RBP6.06□□□□□ -1.44
ATXN3-223ENST00000553686 ZNF234Q14588 700 aa6.06□□□□□ -1.44
ATXN3-223ENST00000553686 ZNF169Q14929 603 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-223ENST00000553686 TMEM132DQ14C87 1099 aa6.06□□□□□ -1.44
ATXN3-223ENST00000553686 NECTIN1Q15223 517 aa6.06□□□□□ -1.44
ATXN3-223ENST00000553686 TGIF1Q15583 401 aa6.06□□□□□ -1.44
ATXN3-223ENST00000553686 CALCRLQ16602 461 aa6.06□□□□□ -1.44
ATXN3-223ENST00000553686 PGS1Q32NB8 556 aa6.06□□□□□ -1.44
ATXN3-223ENST00000553686 DCAF6Q58WW2 860 aa6.06□□□□□ -1.44
ATXN3-223ENST00000553686 JADE1Q6IE81 842 aa6.06□□□□□ -1.44
ATXN3-223ENST00000553686 CAPRIN2Q6IMN6 1127 aaKnown RBP6.06□□□□□ -1.44
ATXN3-223ENST00000553686 RBM44Q6ZP01 1051 aaKnown RBP6.06□□□□□ -1.44
ATXN3-223ENST00000553686 DSG4Q86SJ6 1040 aa6.06□□□□□ -1.44
ATXN3-223ENST00000553686 IQCHQ86VS3 1027 aa6.06□□□□□ -1.44
ATXN3-223ENST00000553686 SH2D3CQ8N5H7 860 aa6.06□□□□□ -1.44
ATXN3-223ENST00000553686 SIMC1Q8NDZ2 872 aa6.06□□□□□ -1.44
ATXN3-223ENST00000553686 OVCA2Q8WZ82 227 aa6.06□□□□□ -1.44
ATXN3-223ENST00000553686 SCAMP4Q969E2 229 aa6.06□□□□□ -1.44
ATXN3-223ENST00000553686 RGMAQ96B86 450 aa6.06□□□□□ -1.44
ATXN3-223ENST00000553686 SERAC1Q96JX3 654 aa6.06□□□□□ -1.44
ATXN3-223ENST00000553686 ZNF560Q96MR9 790 aa6.06□□□□□ -1.44
ATXN3-223ENST00000553686 TRIB1Q96RU8 372 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms