RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 SGPP1Q9BX95 441 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 CIPCQ9C0C6 399 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 PABPC3Q9H361 631 aaKnown RBP5.04□□□□□ -1.6
VTI1B-202ENST00000553619 ATP13A3Q9H7F0 1226 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 GCM1Q9NP62 436 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 CASS4Q9NQ75 786 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 HPS4Q9NQG7 708 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 UBP1Q9NZI7 540 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 HACD3Q9P035 362 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 PRKAG3Q9UGI9 489 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 INTS6Q9UL03 887 aaKnown RBP5.04□□□□□ -1.6
VTI1B-202ENST00000553619 CLEC4EQ9ULY5 219 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 PHTF1Q9UMS5 762 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 RPL26L1Q9UNX3 145 aaKnown RBP5.04□□□□□ -1.6
VTI1B-202ENST00000553619 NUMBLQ9Y6R0 609 aa5.04□□□□□ -1.6
VTI1B-202ENST00000553619 DENND4AQ7Z401 1863 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 EDDM13A0A1B0GTR0 161 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 FAM237BA0A1B0GVD1 139 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 LOC285095A0A1B0GVY8 99 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 TCRBV7S3A2A0A539 114 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 HEATR9A2RTY3 570 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 C2orf81A6NN90 581 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 NOTOA8MTQ0 251 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 ANKRD66B4E2M5 251 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 C2CD4DB7Z1M9 353 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 WASH3PC4AMC7 463 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 CLGNO14967 610 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 PFDN6O15212 129 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 SIGLEC6O43699 453 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 RNASEH1O60930 286 aaKnown RBP5.03□□□□□ -1.6
VTI1B-202ENST00000553619 SOCS5O75159 536 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 PMPCBO75439 489 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 KAT7O95251 611 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 CD160O95971 181 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 MT-CYBP00156 380 aaPredicted RBP5.03□□□□□ -1.6
VTI1B-202ENST00000553619 CPP00450 1065 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 AGTP01019 485 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 IVLP07476 585 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 ABHD2P08910 425 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 FAM153BP0C7A2 387 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 MYBL2P10244 700 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 SRCP12931 536 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 HNRNPLP14866 589 aaKnown RBP eCLIP5.03□□□□□ -1.6
VTI1B-202ENST00000553619 CR2P20023 1033 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 DRD1P21728 446 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 XPAP23025 273 aaPredicted RBP5.03□□□□□ -1.6
VTI1B-202ENST00000553619 ATP5DP30049 168 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 STX2P32856 288 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 ADRA1AP35348 466 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 PPARGP37231 505 aaPredicted RBP5.03□□□□□ -1.6
VTI1B-202ENST00000553619 OPRD1P41143 372 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 ELK3P41970 407 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 KIR2DL1P43626 348 aaPredicted RBP5.03□□□□□ -1.6
VTI1B-202ENST00000553619 KIR2DL2P43627 348 aaPredicted RBP5.03□□□□□ -1.6
VTI1B-202ENST00000553619 SLC6A11P48066 632 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 MAXP61244 160 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 MRPS21P82921 87 aaKnown RBP5.03□□□□□ -1.6
VTI1B-202ENST00000553619 DSC2Q02487 901 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 GRSF1Q12849 480 aaKnown RBP eCLIP5.03□□□□□ -1.6
VTI1B-202ENST00000553619 TDGQ13569 410 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 SLC29A2Q14542 456 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 CASP8Q14790 479 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 SLC1A5Q15758 541 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 KYNUQ16719 465 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 GEN1Q17RS7 908 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 SKIDA1Q1XH10 827 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 KLHL38Q2WGJ6 581 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 FAM153CQ494X1 144 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 FUT11Q495W5 492 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 HSF5Q4G112 596 aaPredicted RBP5.03□□□□□ -1.6
VTI1B-202ENST00000553619 FNDC3BQ53EP0 1204 aaKnown RBP5.03□□□□□ -1.6
VTI1B-202ENST00000553619 HSP90B2PQ58FF3 399 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 SPANXN3Q5MJ09 141 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 FNBP1LQ5T0N5 605 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 ARMC12Q5T9G4 340 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 FAM46CQ5VWP2 391 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 CWF19L1Q69YN2 538 aaKnown RBP5.03□□□□□ -1.6
VTI1B-202ENST00000553619 C22orf39Q6P5X5 142 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 ZNF449Q6P9G9 518 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 LINGO4Q6UY18 593 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 LEKR1Q6ZMV7 388 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 Q7L0L9 218 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 TMC3Q7Z5M5 1100 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 PRPF39Q86UA1 669 aaKnown RBP5.03□□□□□ -1.6
VTI1B-202ENST00000553619 ADIPOR2Q86V24 386 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 CAND1Q86VP6 1230 aaKnown RBP5.03□□□□□ -1.6
VTI1B-202ENST00000553619 LMNTD2Q8IXW0 634 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.03□□□□□ -1.6
VTI1B-202ENST00000553619 TERB1Q8NA31 727 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 FBXO36Q8NEA4 188 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 TMIEQ8NEW7 156 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 PPHLN1Q8NEY8 458 aaKnown RBP5.03□□□□□ -1.6
VTI1B-202ENST00000553619 OR52K1Q8NGK4 314 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 SPATA22Q8NHS9 363 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 ARRDC2Q8TBH0 407 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 WFDC5Q8TCV5 224 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 CALML6Q8TD86 181 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 BRSK1Q8TDC3 778 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 OR8D1Q8WZ84 308 aa5.03□□□□□ -1.6
VTI1B-202ENST00000553619 PEX13Q92968 403 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms