RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 FOXN2P32314 431 aa14.74□□□□□ -0.05
MTHFD1-204ENST00000553405 PLTPP55058 493 aa14.74□□□□□ -0.05
MTHFD1-204ENST00000553405 IRX4P78413 519 aa14.74□□□□□ -0.05
MTHFD1-204ENST00000553405 TMPRSS15P98073 1019 aa14.74□□□□□ -0.05
MTHFD1-204ENST00000553405 GRIK2Q13002 908 aa14.74□□□□□ -0.05
MTHFD1-204ENST00000553405 NFATC4Q14934 902 aa14.74□□□□□ -0.05
MTHFD1-204ENST00000553405 FASTKD3Q14CZ7 662 aaKnown RBP14.74□□□□□ -0.05
MTHFD1-204ENST00000553405 HIF1AQ16665 826 aa14.74□□□□□ -0.05
MTHFD1-204ENST00000553405 TRIM61Q5EBN2 209 aa14.74□□□□□ -0.05
MTHFD1-204ENST00000553405 RAET1GQ6H3X3 334 aa14.74□□□□□ -0.05
MTHFD1-204ENST00000553405 CES3Q6UWW8 571 aa14.74□□□□□ -0.05
MTHFD1-204ENST00000553405 PTAR1Q7Z6K3 402 aaPredicted RBP14.74□□□□□ -0.05
MTHFD1-204ENST00000553405 RABEPKQ7Z6M1 372 aa14.74□□□□□ -0.05
MTHFD1-204ENST00000553405 PIANPQ8IYJ0 282 aa14.74□□□□□ -0.05
MTHFD1-204ENST00000553405 DCLK2Q8N568 766 aa14.74□□□□□ -0.05
MTHFD1-204ENST00000553405 CCDC97Q96F63 343 aaPredicted RBP14.74□□□□□ -0.05
MTHFD1-204ENST00000553405 KLHDC7BQ96G42 594 aa14.74□□□□□ -0.05
MTHFD1-204ENST00000553405 SCARF2Q96GP6 870 aaPredicted RBP14.74□□□□□ -0.05
MTHFD1-204ENST00000553405 EBNA1BP2Q99848 306 aaKnown RBP14.74□□□□□ -0.05
MTHFD1-204ENST00000553405 PHACTR1Q9C0D0 580 aa14.74□□□□□ -0.05
MTHFD1-204ENST00000553405 WDR26Q9H7D7 661 aa14.74□□□□□ -0.05
MTHFD1-204ENST00000553405 KLF15Q9UIH9 416 aa14.74□□□□□ -0.05
MTHFD1-204ENST00000553405 ANKRD6Q9Y2G4 727 aa14.74□□□□□ -0.05
MTHFD1-204ENST00000553405 PCYT1BQ9Y5K3 369 aaPredicted RBP14.74□□□□□ -0.05
MTHFD1-204ENST00000553405 SNX11Q9Y5W9 270 aa14.74□□□□□ -0.05
MTHFD1-204ENST00000553405 ADAMTS9Q9P2N4 1935 aa14.74□□□□□ -0.05
MTHFD1-204ENST00000553405 RALGAPA1Q6GYQ0 2036 aa14.73□□□□□ -0.05
MTHFD1-204ENST00000553405 CABIN1Q9Y6J0 2220 aa14.73□□□□□ -0.05
MTHFD1-204ENST00000553405 LNP1A1A4G5 178 aa14.73□□□□□ -0.05
MTHFD1-204ENST00000553405 MAGEB16A2A368 324 aa14.73□□□□□ -0.05
MTHFD1-204ENST00000553405 OR51F1A6NGY5 319 aa14.73□□□□□ -0.05
MTHFD1-204ENST00000553405 NDC80O14777 642 aa14.73□□□□□ -0.05
MTHFD1-204ENST00000553405 UGT1A9O60656 530 aa14.73□□□□□ -0.05
MTHFD1-204ENST00000553405 SRP72O76094 671 aaKnown RBP14.73□□□□□ -0.05
MTHFD1-204ENST00000553405 PYGLP06737 847 aa14.73□□□□□ -0.05
MTHFD1-204ENST00000553405 MYCLP1P12525 358 aaPredicted RBP14.73□□□□□ -0.05
MTHFD1-204ENST00000553405 UGT1A6P19224 532 aa14.73□□□□□ -0.05
MTHFD1-204ENST00000553405 UGT1A1P22309 533 aa14.73□□□□□ -0.05
MTHFD1-204ENST00000553405 UGT1A4P22310 534 aa14.73□□□□□ -0.05
MTHFD1-204ENST00000553405 UGT1A3P35503 534 aa14.73□□□□□ -0.05
MTHFD1-204ENST00000553405 UGT1A5P35504 534 aa14.73□□□□□ -0.05
MTHFD1-204ENST00000553405 HADHAP40939 763 aa14.73□□□□□ -0.05
MTHFD1-204ENST00000553405 GPR1P46091 355 aa14.73□□□□□ -0.05
MTHFD1-204ENST00000553405 CARSP49589 748 aaKnown RBP14.73□□□□□ -0.05
MTHFD1-204ENST00000553405 CDKN1CP49918 316 aaPredicted RBP14.73□□□□□ -0.05
MTHFD1-204ENST00000553405 ARL4CP56559 192 aa14.73□□□□□ -0.05
MTHFD1-204ENST00000553405 CAV1Q03135 178 aa14.73□□□□□ -0.05
MTHFD1-204ENST00000553405 SPEM2Q0P670 501 aa14.73□□□□□ -0.05
MTHFD1-204ENST00000553405 CALCOCO2Q13137 446 aa14.73□□□□□ -0.05
MTHFD1-204ENST00000553405 EIF2B5Q13144 721 aaKnown RBP14.73□□□□□ -0.05
MTHFD1-204ENST00000553405 NFATC2Q13469 925 aa14.73□□□□□ -0.05
MTHFD1-204ENST00000553405 LAMB3Q13751 1172 aa14.73□□□□□ -0.05
MTHFD1-204ENST00000553405 SHBQ15464 509 aa14.73□□□□□ -0.05
MTHFD1-204ENST00000553405 SKIDA1Q1XH10 827 aa14.73□□□□□ -0.05
MTHFD1-204ENST00000553405 ZNF423Q2M1K9 1284 aa14.73□□□□□ -0.05
MTHFD1-204ENST00000553405 BBS9Q3SYG4 887 aa14.73□□□□□ -0.05
MTHFD1-204ENST00000553405 ANKRD20A4Q4UJ75 823 aa14.73□□□□□ -0.05
MTHFD1-204ENST00000553405 STEAP4Q687X5 459 aa14.73□□□□□ -0.05
MTHFD1-204ENST00000553405 KIAA0930Q6ICG6 404 aaPredicted RBP14.73□□□□□ -0.05
MTHFD1-204ENST00000553405 MACC1Q6ZN28 852 aa14.73□□□□□ -0.05
MTHFD1-204ENST00000553405 TRIM74Q86UV6 250 aa14.73□□□□□ -0.05
MTHFD1-204ENST00000553405 DCP2Q8IU60 420 aaKnown RBP14.73□□□□□ -0.05
MTHFD1-204ENST00000553405 PDIK1LQ8N165 341 aa14.73□□□□□ -0.05
MTHFD1-204ENST00000553405 PNPLA1Q8N8W4 532 aa14.73□□□□□ -0.05
MTHFD1-204ENST00000553405 BTN2A2Q8WVV5 523 aa14.73□□□□□ -0.05
MTHFD1-204ENST00000553405 RUBCNQ92622 972 aa14.73□□□□□ -0.05
MTHFD1-204ENST00000553405 GLYATL1Q969I3 302 aa14.73□□□□□ -0.05
MTHFD1-204ENST00000553405 HDAC10Q969S8 669 aa14.73□□□□□ -0.05
MTHFD1-204ENST00000553405 STAMBPL1Q96FJ0 436 aa14.73□□□□□ -0.05
MTHFD1-204ENST00000553405 HIC2Q96JB3 615 aa14.73□□□□□ -0.05
MTHFD1-204ENST00000553405 SPATA16Q9BXB7 569 aa14.73□□□□□ -0.05
MTHFD1-204ENST00000553405 UGT1A7Q9HAW7 530 aa14.73□□□□□ -0.05
MTHFD1-204ENST00000553405 UGT1A10Q9HAW8 530 aa14.73□□□□□ -0.05
MTHFD1-204ENST00000553405 UGT1A8Q9HAW9 530 aa14.73□□□□□ -0.05
MTHFD1-204ENST00000553405 FGF22Q9HCT0 170 aa14.73□□□□□ -0.05
MTHFD1-204ENST00000553405 FAM114A2Q9NRY5 505 aa14.73□□□□□ -0.05
MTHFD1-204ENST00000553405 GMEB2Q9UKD1 530 aa14.73□□□□□ -0.05
MTHFD1-204ENST00000553405 APPL1Q9UKG1 709 aa14.73□□□□□ -0.05
MTHFD1-204ENST00000553405 SLC17A4Q9Y2C5 497 aa14.73□□□□□ -0.05
MTHFD1-204ENST00000553405 IGLV3-16A0A075B6K0 115 aa14.72□□□□□ -0.05
MTHFD1-204ENST00000553405 USP1O94782 785 aa14.72□□□□□ -0.05
MTHFD1-204ENST00000553405 SLU7O95391 586 aaKnown RBP14.72□□□□□ -0.05
MTHFD1-204ENST00000553405 CEACAM5P06731 702 aa14.72□□□□□ -0.05
MTHFD1-204ENST00000553405 RHOXF2BP0C7M4 288 aa14.72□□□□□ -0.05
MTHFD1-204ENST00000553405 MC4RP32245 332 aa14.72□□□□□ -0.05
MTHFD1-204ENST00000553405 ELK3P41970 407 aa14.72□□□□□ -0.05
MTHFD1-204ENST00000553405 PDE1CQ14123 709 aaPredicted RBP14.72□□□□□ -0.05
MTHFD1-204ENST00000553405 SEMA3AQ14563 771 aa14.72□□□□□ -0.05
MTHFD1-204ENST00000553405 SF3A2Q15428 464 aaKnown RBP14.72□□□□□ -0.05
MTHFD1-204ENST00000553405 CSRP2Q16527 193 aa14.72□□□□□ -0.05
MTHFD1-204ENST00000553405 DNAJC21Q5F1R6 531 aaKnown RBP14.72□□□□□ -0.05
MTHFD1-204ENST00000553405 PSAPL1Q6NUJ1 521 aa14.72□□□□□ -0.05
MTHFD1-204ENST00000553405 DDHD1Q8NEL9 900 aa14.72□□□□□ -0.05
MTHFD1-204ENST00000553405 ZNF398Q8TD17 642 aa14.72□□□□□ -0.05
MTHFD1-204ENST00000553405 OR1E3Q8WZA6 343 aa14.72□□□□□ -0.05
MTHFD1-204ENST00000553405 LRRC39Q96DD0 335 aa14.72□□□□□ -0.05
MTHFD1-204ENST00000553405 RHOXF2Q9BQY4 288 aa14.72□□□□□ -0.05
MTHFD1-204ENST00000553405 FAM129AQ9BZQ8 928 aa14.72□□□□□ -0.05
MTHFD1-204ENST00000553405 ANKZF1Q9H8Y5 726 aa14.72□□□□□ -0.05
MTHFD1-204ENST00000553405 ERVMER34-1Q9H9K5 563 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms