RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 DQX1Q8TE96 717 aaKnown RBP5.15□□□□□ -1.59
CKAP4-203ENST00000553039 FAR1Q8WVX9 515 aa5.15□□□□□ -1.59
CKAP4-203ENST00000553039 ITLN2Q8WWU7 325 aaPredicted RBP5.15□□□□□ -1.59
CKAP4-203ENST00000553039 ISG20Q96AZ6 181 aaKnown RBP5.15□□□□□ -1.59
CKAP4-203ENST00000553039 ELMO3Q96BJ8 720 aa5.15□□□□□ -1.59
CKAP4-203ENST00000553039 DHRS1Q96LJ7 313 aa5.15□□□□□ -1.59
CKAP4-203ENST00000553039 PRMT1Q99873 361 aaKnown RBP5.15□□□□□ -1.59
CKAP4-203ENST00000553039 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.15□□□□□ -1.59
CKAP4-203ENST00000553039 GSX1Q9H4S2 264 aaPredicted RBP5.15□□□□□ -1.59
CKAP4-203ENST00000553039 ACTL8Q9H568 366 aa5.15□□□□□ -1.59
CKAP4-203ENST00000553039 STN1Q9H668 368 aaKnown RBP5.15□□□□□ -1.59
CKAP4-203ENST00000553039 ZDHHC6Q9H6R6 413 aa5.15□□□□□ -1.59
CKAP4-203ENST00000553039 PDE7BQ9NP56 450 aa5.15□□□□□ -1.59
CKAP4-203ENST00000553039 TMEM51Q9NW97 253 aa5.15□□□□□ -1.59
CKAP4-203ENST00000553039 ARHGEF38Q9NXL2 777 aa5.15□□□□□ -1.59
CKAP4-203ENST00000553039 TAAR2Q9P1P5 351 aa5.15□□□□□ -1.59
CKAP4-203ENST00000553039 VPS51Q9UID3 782 aa5.15□□□□□ -1.59
CKAP4-203ENST00000553039 LNPEPQ9UIQ6 1025 aa5.15□□□□□ -1.59
CKAP4-203ENST00000553039 TSPAN16Q9UKR8 245 aa5.15□□□□□ -1.59
CKAP4-203ENST00000553039 LIMCH1Q9UPQ0 1083 aa5.15□□□□□ -1.59
CKAP4-203ENST00000553039 FRMD4BQ9Y2L6 1034 aa5.15□□□□□ -1.59
CKAP4-203ENST00000553039 OR1A2Q9Y585 309 aa5.15□□□□□ -1.59
CKAP4-203ENST00000553039 PCDHGB6Q9Y5F9 930 aa5.15□□□□□ -1.59
CKAP4-203ENST00000553039 COL27A1Q8IZC6 1860 aaPredicted RBP5.15□□□□□ -1.59
CKAP4-203ENST00000553039 PCSK5Q92824 1860 aa5.15□□□□□ -1.59
CKAP4-203ENST00000553039 CELSR1Q9NYQ6 3014 aa5.14□□□□□ -1.59
CKAP4-203ENST00000553039 A0A1W2PQJ5 194 aa5.14□□□□□ -1.59
CKAP4-203ENST00000553039 CFAP69A5D8W1 941 aa5.14□□□□□ -1.59
CKAP4-203ENST00000553039 HMGB1P1B2RPK0 211 aaPredicted RBP5.14□□□□□ -1.59
CKAP4-203ENST00000553039 H3BRJ5 948 aa5.14□□□□□ -1.59
CKAP4-203ENST00000553039 TULP2O00295 520 aa5.14□□□□□ -1.59
CKAP4-203ENST00000553039 IFRD1O00458 451 aaPredicted RBP5.14□□□□□ -1.59
CKAP4-203ENST00000553039 KRIT1O00522 736 aa5.14□□□□□ -1.59
CKAP4-203ENST00000553039 CCL21O00585 134 aa5.14□□□□□ -1.59
CKAP4-203ENST00000553039 SNAP91O60641 907 aa5.14□□□□□ -1.59
CKAP4-203ENST00000553039 SPAG6O75602 509 aa5.14□□□□□ -1.59
CKAP4-203ENST00000553039 TRUB2O95900 331 aaKnown RBP5.14□□□□□ -1.59
CKAP4-203ENST00000553039 AVPP01185 164 aa5.14□□□□□ -1.59
CKAP4-203ENST00000553039 KLK3P07288 261 aaPredicted RBP5.14□□□□□ -1.59
CKAP4-203ENST00000553039 CD19P15391 556 aa5.14□□□□□ -1.59
CKAP4-203ENST00000553039 HOXD13P35453 343 aa5.14□□□□□ -1.59
CKAP4-203ENST00000553039 ANP32AP39687 249 aaKnown RBP5.14□□□□□ -1.59
CKAP4-203ENST00000553039 ARCN1P48444 511 aaKnown RBP5.14□□□□□ -1.59
CKAP4-203ENST00000553039 CCNHP51946 323 aaPredicted RBP5.14□□□□□ -1.59
CKAP4-203ENST00000553039 KIAA1024LP59773 190 aa5.14□□□□□ -1.59
CKAP4-203ENST00000553039 CDK17Q00537 523 aa5.14□□□□□ -1.59
CKAP4-203ENST00000553039 CHAF1BQ13112 559 aa5.14□□□□□ -1.59
CKAP4-203ENST00000553039 IRF4Q15306 451 aa5.14□□□□□ -1.59
CKAP4-203ENST00000553039 DBN1Q16643 649 aa5.14□□□□□ -1.59
CKAP4-203ENST00000553039 KNOP1Q1ED39 458 aaKnown RBP5.14□□□□□ -1.59
CKAP4-203ENST00000553039 GOLGA7BQ2TAP0 167 aa5.14□□□□□ -1.59
CKAP4-203ENST00000553039 ANKRD40Q6AI12 368 aa5.14□□□□□ -1.59
CKAP4-203ENST00000553039 ERAP2Q6P179 960 aa5.14□□□□□ -1.59
CKAP4-203ENST00000553039 CNNM4Q6P4Q7 775 aa5.14□□□□□ -1.59
CKAP4-203ENST00000553039 FOXR2Q6PJQ5 311 aa5.14□□□□□ -1.59
CKAP4-203ENST00000553039 GDPD4Q6W3E5 623 aa5.14□□□□□ -1.59
CKAP4-203ENST00000553039 ZNF783Q6ZMS7 281 aa5.14□□□□□ -1.59
CKAP4-203ENST00000553039 PPP1R3BQ86XI6 285 aa5.14□□□□□ -1.59
CKAP4-203ENST00000553039 GUF1Q8N442 669 aaKnown RBP5.14□□□□□ -1.59
CKAP4-203ENST00000553039 DCAF4L2Q8NA75 395 aa5.14□□□□□ -1.59
CKAP4-203ENST00000553039 CT55Q8WUE5 264 aa5.14□□□□□ -1.59
CKAP4-203ENST00000553039 NUDT8Q8WV74 236 aa5.14□□□□□ -1.59
CKAP4-203ENST00000553039 SLC35F5Q8WV83 523 aa5.14□□□□□ -1.59
CKAP4-203ENST00000553039 OR1E3Q8WZA6 343 aa5.14□□□□□ -1.59
CKAP4-203ENST00000553039 RNF166Q96A37 237 aaPredicted RBP5.14□□□□□ -1.59
CKAP4-203ENST00000553039 FAM149B1Q96BN6 582 aa5.14□□□□□ -1.59
CKAP4-203ENST00000553039 MTFMTQ96DP5 389 aaKnown RBP5.14□□□□□ -1.59
CKAP4-203ENST00000553039 EPSTI1Q96J88 318 aa5.14□□□□□ -1.59
CKAP4-203ENST00000553039 ZSCAN31Q96LW9 406 aaPredicted RBP5.14□□□□□ -1.59
CKAP4-203ENST00000553039 FER1L6-AS2Q96M78 137 aa5.14□□□□□ -1.59
CKAP4-203ENST00000553039 KLHL32Q96NJ5 620 aa5.14□□□□□ -1.59
CKAP4-203ENST00000553039 IP6K3Q96PC2 410 aa5.14□□□□□ -1.59
CKAP4-203ENST00000553039 MED15Q96RN5 788 aa5.14□□□□□ -1.59
CKAP4-203ENST00000553039 NUDT9Q9BW91 350 aa5.14□□□□□ -1.59
CKAP4-203ENST00000553039 ZSCAN16Q9H4T2 348 aaPredicted RBP5.14□□□□□ -1.59
CKAP4-203ENST00000553039 CARS2Q9HA77 564 aaKnown RBP5.14□□□□□ -1.59
CKAP4-203ENST00000553039 UPF2Q9HAU5 1272 aaKnown RBP5.14□□□□□ -1.59
CKAP4-203ENST00000553039 CISHQ9NSE2 258 aa5.14□□□□□ -1.59
CKAP4-203ENST00000553039 KCTD5Q9NXV2 234 aa5.14□□□□□ -1.59
CKAP4-203ENST00000553039 TMEM9Q9P0T7 183 aa5.14□□□□□ -1.59
CKAP4-203ENST00000553039 XPO7Q9UIA9 1087 aaKnown RBP5.14□□□□□ -1.59
CKAP4-203ENST00000553039 HPCAL4Q9UM19 191 aa5.14□□□□□ -1.59
CKAP4-203ENST00000553039 SCN8AQ9UQD0 1980 aa5.14□□□□□ -1.59
CKAP4-203ENST00000553039 SPENQ96T58 3664 aaKnown RBP5.13□□□□□ -1.59
CKAP4-203ENST00000553039 TRGV8A0A0C4DH27 118 aa5.13□□□□□ -1.59
CKAP4-203ENST00000553039 ILVBLA1L0T0 632 aa5.13□□□□□ -1.59
CKAP4-203ENST00000553039 SLC35F4A4IF30 521 aa5.13□□□□□ -1.59
CKAP4-203ENST00000553039 GOLGA6CA6NDK9 693 aa5.13□□□□□ -1.59
CKAP4-203ENST00000553039 GOLGA6BA6NDN3 693 aa5.13□□□□□ -1.59
CKAP4-203ENST00000553039 GOLGA6L3A6NEY3 463 aa5.13□□□□□ -1.59
CKAP4-203ENST00000553039 TMEM202A6NGA9 273 aa5.13□□□□□ -1.59
CKAP4-203ENST00000553039 H3BQV1 296 aa5.13□□□□□ -1.59
CKAP4-203ENST00000553039 RNF103O00237 685 aa5.13□□□□□ -1.59
CKAP4-203ENST00000553039 ZNF821O75541 412 aaPredicted RBP5.13□□□□□ -1.59
CKAP4-203ENST00000553039 JRKO75564 520 aa5.13□□□□□ -1.59
CKAP4-203ENST00000553039 ADCY5O95622 1261 aa5.13□□□□□ -1.59
CKAP4-203ENST00000553039 ANKRD34CP0C6C1 535 aa5.13□□□□□ -1.59
CKAP4-203ENST00000553039 GOLGA6DP0CG33 693 aa5.13□□□□□ -1.59
CKAP4-203ENST00000553039 FGF5P12034 268 aa5.13□□□□□ -1.59
CKAP4-203ENST00000553039 OR1E1P30953 314 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms