RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 WDR24Q96S15 920 aa10.2□□□□□ -0.78
TRAFD1-208ENST00000552890 TSSK1BQ9BXA7 367 aa10.2□□□□□ -0.78
TRAFD1-208ENST00000552890 AP1M1Q9BXS5 423 aa10.2□□□□□ -0.78
TRAFD1-208ENST00000552890 SMOXQ9NWM0 555 aa10.2□□□□□ -0.78
TRAFD1-208ENST00000552890 ANAPC5Q9UJX4 755 aa10.2□□□□□ -0.78
TRAFD1-208ENST00000552890 GPR34Q9UPC5 381 aa10.2□□□□□ -0.78
TRAFD1-208ENST00000552890 OR1A2Q9Y585 309 aa10.2□□□□□ -0.78
TRAFD1-208ENST00000552890 PCDH15Q96QU1 1955 aa10.19□□□□□ -0.78
TRAFD1-208ENST00000552890 FAM187AA6NFU0 413 aa10.19□□□□□ -0.78
TRAFD1-208ENST00000552890 GOLGA8CPA6NN73 597 aa10.19□□□□□ -0.78
TRAFD1-208ENST00000552890 USP27XA6NNY8 438 aa10.19□□□□□ -0.78
TRAFD1-208ENST00000552890 KMOO15229 486 aa10.19□□□□□ -0.78
TRAFD1-208ENST00000552890 BPIP17213 487 aa10.19□□□□□ -0.78
TRAFD1-208ENST00000552890 NOVA1P51513 510 aaKnown RBP10.19□□□□□ -0.78
TRAFD1-208ENST00000552890 CLCNKAP51800 687 aa10.19□□□□□ -0.78
TRAFD1-208ENST00000552890 GDF10P55107 478 aa10.19□□□□□ -0.78
TRAFD1-208ENST00000552890 DR1Q01658 176 aa10.19□□□□□ -0.78
TRAFD1-208ENST00000552890 BNC1Q01954 994 aa10.19□□□□□ -0.78
TRAFD1-208ENST00000552890 PLOD1Q02809 727 aaPredicted RBP10.19□□□□□ -0.78
TRAFD1-208ENST00000552890 CAV1Q03135 178 aa10.19□□□□□ -0.78
TRAFD1-208ENST00000552890 BIRC2Q13490 618 aa10.19□□□□□ -0.78
TRAFD1-208ENST00000552890 WHAMMP3Q1A5X7 153 aa10.19□□□□□ -0.78
TRAFD1-208ENST00000552890 DNAJC21Q5F1R6 531 aaKnown RBP10.19□□□□□ -0.78
TRAFD1-208ENST00000552890 PCID2Q5JVF3 399 aa10.19□□□□□ -0.78
TRAFD1-208ENST00000552890 LRRC8BQ6P9F7 803 aa10.19□□□□□ -0.78
TRAFD1-208ENST00000552890 SNX20Q7Z614 316 aa10.19□□□□□ -0.78
TRAFD1-208ENST00000552890 CREG2Q8IUH2 290 aa10.19□□□□□ -0.78
TRAFD1-208ENST00000552890 LMNTD2Q8IXW0 634 aa10.19□□□□□ -0.78
TRAFD1-208ENST00000552890 MPP5Q8N3R9 675 aa10.19□□□□□ -0.78
TRAFD1-208ENST00000552890 TTC30BQ8N4P2 665 aa10.19□□□□□ -0.78
TRAFD1-208ENST00000552890 ZNF548Q8NEK5 533 aaPredicted RBP10.19□□□□□ -0.78
TRAFD1-208ENST00000552890 OR4K2Q8NGD2 314 aa10.19□□□□□ -0.78
TRAFD1-208ENST00000552890 GDAP1Q8TB36 358 aa10.19□□□□□ -0.78
TRAFD1-208ENST00000552890 ZNF398Q8TD17 642 aa10.19□□□□□ -0.78
TRAFD1-208ENST00000552890 LMX1AQ8TE12 382 aa10.19□□□□□ -0.78
TRAFD1-208ENST00000552890 SCAMP4Q969E2 229 aa10.19□□□□□ -0.78
TRAFD1-208ENST00000552890 SH3KBP1Q96B97 665 aa10.19□□□□□ -0.78
TRAFD1-208ENST00000552890 MS4A14Q96JA4 679 aa10.19□□□□□ -0.78
TRAFD1-208ENST00000552890 FAM129AQ9BZQ8 928 aa10.19□□□□□ -0.78
TRAFD1-208ENST00000552890 RAB17Q9H0T7 212 aa10.19□□□□□ -0.78
TRAFD1-208ENST00000552890 TSPYL1Q9H0U9 437 aa10.19□□□□□ -0.78
TRAFD1-208ENST00000552890 C10orf88Q9H8K7 445 aa10.19□□□□□ -0.78
TRAFD1-208ENST00000552890 CARS2Q9HA77 564 aaKnown RBP10.19□□□□□ -0.78
TRAFD1-208ENST00000552890 MRM3Q9HC36 420 aaKnown RBP10.19□□□□□ -0.78
TRAFD1-208ENST00000552890 CYP4F12Q9HCS2 524 aa10.19□□□□□ -0.78
TRAFD1-208ENST00000552890 IL26Q9NPH9 171 aa10.19□□□□□ -0.78
TRAFD1-208ENST00000552890 CASS4Q9NQ75 786 aa10.19□□□□□ -0.78
TRAFD1-208ENST00000552890 NLE1Q9NVX2 485 aaPredicted RBP10.19□□□□□ -0.78
TRAFD1-208ENST00000552890 ASIC3Q9UHC3 531 aa10.19□□□□□ -0.78
TRAFD1-208ENST00000552890 MOSPD1Q9UJG1 213 aa10.19□□□□□ -0.78
TRAFD1-208ENST00000552890 PCOLCE2Q9UKZ9 415 aa10.19□□□□□ -0.78
TRAFD1-208ENST00000552890 ASCC3Q8N3C0 2202 aaKnown RBP10.19□□□□□ -0.78
TRAFD1-208ENST00000552890 PCNX2A6NKB5 2137 aa10.19□□□□□ -0.78
TRAFD1-208ENST00000552890 SDR42E2A6NKP2 422 aa10.18□□□□□ -0.78
TRAFD1-208ENST00000552890 TMX2-CTNND1H3BSU7 103 aa10.18□□□□□ -0.78
TRAFD1-208ENST00000552890 SH3BP5O60239 455 aa10.18□□□□□ -0.78
TRAFD1-208ENST00000552890 NUAK1O60285 661 aa10.18□□□□□ -0.78
TRAFD1-208ENST00000552890 SRP72O76094 671 aaKnown RBP10.18□□□□□ -0.78
TRAFD1-208ENST00000552890 CDK14O94921 469 aa10.18□□□□□ -0.78
TRAFD1-208ENST00000552890 KCNK5O95279 499 aa10.18□□□□□ -0.78
TRAFD1-208ENST00000552890 PRAMEF1O95521 474 aa10.18□□□□□ -0.78
TRAFD1-208ENST00000552890 TTC4O95801 387 aa10.18□□□□□ -0.78
TRAFD1-208ENST00000552890 SLC4A1P02730 911 aa10.18□□□□□ -0.78
TRAFD1-208ENST00000552890 CEACAM5P06731 702 aa10.18□□□□□ -0.78
TRAFD1-208ENST00000552890 MSH3P20585 1137 aa10.18□□□□□ -0.78
TRAFD1-208ENST00000552890 PSMA3P25788 255 aa10.18□□□□□ -0.78
TRAFD1-208ENST00000552890 KCNJ1P48048 391 aa10.18□□□□□ -0.78
TRAFD1-208ENST00000552890 TUBB4BP68371 445 aa10.18□□□□□ -0.78
TRAFD1-208ENST00000552890 PRAMEP78395 509 aa10.18□□□□□ -0.78
TRAFD1-208ENST00000552890 DAB2P98082 770 aa10.18□□□□□ -0.78
TRAFD1-208ENST00000552890 CACNG1Q06432 222 aa10.18□□□□□ -0.78
TRAFD1-208ENST00000552890 CALCOCO2Q13137 446 aa10.18□□□□□ -0.78
TRAFD1-208ENST00000552890 EIF2B5Q13144 721 aaKnown RBP10.18□□□□□ -0.78
TRAFD1-208ENST00000552890 NFATC2Q13469 925 aa10.18□□□□□ -0.78
TRAFD1-208ENST00000552890 PTK6Q13882 451 aa10.18□□□□□ -0.78
TRAFD1-208ENST00000552890 SEPT6Q14141 434 aa10.18□□□□□ -0.78
TRAFD1-208ENST00000552890 IHHQ14623 411 aa10.18□□□□□ -0.78
TRAFD1-208ENST00000552890 CLPPQ16740 277 aaPredicted RBP10.18□□□□□ -0.78
TRAFD1-208ENST00000552890 ALG11Q2TAA5 492 aa10.18□□□□□ -0.78
TRAFD1-208ENST00000552890 DENND5AQ6IQ26 1287 aa10.18□□□□□ -0.78
TRAFD1-208ENST00000552890 AFTPHQ6ULP2 937 aa10.18□□□□□ -0.78
TRAFD1-208ENST00000552890 SYT10Q6XYQ8 523 aa10.18□□□□□ -0.78
TRAFD1-208ENST00000552890 NYAP1Q6ZVC0 841 aa10.18□□□□□ -0.78
TRAFD1-208ENST00000552890 TAF8Q7Z7C8 310 aa10.18□□□□□ -0.78
TRAFD1-208ENST00000552890 SDCCAG8Q86SQ7 713 aaPredicted RBP10.18□□□□□ -0.78
TRAFD1-208ENST00000552890 LRRTM4Q86VH4 590 aa10.18□□□□□ -0.78
TRAFD1-208ENST00000552890 CNPY4Q8N129 248 aa10.18□□□□□ -0.78
TRAFD1-208ENST00000552890 PDIK1LQ8N165 341 aa10.18□□□□□ -0.78
TRAFD1-208ENST00000552890 CACTIN-AS1Q8N1I8 211 aa10.18□□□□□ -0.78
TRAFD1-208ENST00000552890 GALNT15Q8N3T1 639 aa10.18□□□□□ -0.78
TRAFD1-208ENST00000552890 GPR26Q8NDV2 337 aa10.18□□□□□ -0.78
TRAFD1-208ENST00000552890 DDHD1Q8NEL9 900 aa10.18□□□□□ -0.78
TRAFD1-208ENST00000552890 CALML6Q8TD86 181 aa10.18□□□□□ -0.78
TRAFD1-208ENST00000552890 LRRC39Q96DD0 335 aa10.18□□□□□ -0.78
TRAFD1-208ENST00000552890 CNDP2Q96KP4 475 aaKnown RBP10.18□□□□□ -0.78
TRAFD1-208ENST00000552890 OR2M4Q96R27 311 aa10.18□□□□□ -0.78
TRAFD1-208ENST00000552890 COPS8Q99627 209 aa10.18□□□□□ -0.78
TRAFD1-208ENST00000552890 DPYSL5Q9BPU6 564 aa10.18□□□□□ -0.78
TRAFD1-208ENST00000552890 TIMM29Q9BSF4 260 aa10.18□□□□□ -0.78
TRAFD1-208ENST00000552890 ASB8Q9H765 288 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms