RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 LRP8Q14114 963 aa11.78□□□□□ -0.52
CKAP4-202ENST00000552828 TXNRD3NBQ6F5E7 133 aa11.78□□□□□ -0.52
CKAP4-202ENST00000552828 RAET1GQ6H3X3 334 aa11.78□□□□□ -0.52
CKAP4-202ENST00000552828 ZNF765Q7L2R6 523 aa11.78□□□□□ -0.52
CKAP4-202ENST00000552828 POLNQ7Z5Q5 900 aa11.78□□□□□ -0.52
CKAP4-202ENST00000552828 KIAA1328Q86T90 577 aa11.78□□□□□ -0.52
CKAP4-202ENST00000552828 TSPAN33Q86UF1 283 aa11.78□□□□□ -0.52
CKAP4-202ENST00000552828 BMPERQ8N8U9 685 aa11.78□□□□□ -0.52
CKAP4-202ENST00000552828 KCTD6Q8NC69 237 aa11.78□□□□□ -0.52
CKAP4-202ENST00000552828 ACRBPQ8NEB7 543 aa11.78□□□□□ -0.52
CKAP4-202ENST00000552828 PDCD6IPQ8WUM4 868 aaKnown RBP11.78□□□□□ -0.52
CKAP4-202ENST00000552828 JPH3Q8WXH2 748 aaPredicted RBP11.78□□□□□ -0.52
CKAP4-202ENST00000552828 ART4Q93070 314 aa11.78□□□□□ -0.52
CKAP4-202ENST00000552828 CALR3Q96L12 384 aaKnown RBP11.78□□□□□ -0.52
CKAP4-202ENST00000552828 KCNK4Q9NYG8 393 aa11.78□□□□□ -0.52
CKAP4-202ENST00000552828 PILRAQ9UKJ1 303 aa11.78□□□□□ -0.52
CKAP4-202ENST00000552828 TFR2Q9UP52 801 aa11.78□□□□□ -0.52
CKAP4-202ENST00000552828 PLEKHM1Q9Y4G2 1056 aa11.78□□□□□ -0.52
CKAP4-202ENST00000552828 PYGLP06737 847 aa11.77□□□□□ -0.53
CKAP4-202ENST00000552828 LIFP15018 202 aa11.77□□□□□ -0.53
CKAP4-202ENST00000552828 AMPD1P23109 780 aa11.77□□□□□ -0.53
CKAP4-202ENST00000552828 GJC1P36383 396 aa11.77□□□□□ -0.53
CKAP4-202ENST00000552828 ACTR1BP42025 376 aa11.77□□□□□ -0.53
CKAP4-202ENST00000552828 VAV2P52735 878 aa11.77□□□□□ -0.53
CKAP4-202ENST00000552828 NAP1L1P55209 391 aaKnown RBP11.77□□□□□ -0.53
CKAP4-202ENST00000552828 POLE2P56282 527 aa11.77□□□□□ -0.53
CKAP4-202ENST00000552828 RAB15P59190 212 aa11.77□□□□□ -0.53
CKAP4-202ENST00000552828 TAS2R40P59535 323 aa11.77□□□□□ -0.53
CKAP4-202ENST00000552828 ACTR1AP61163 376 aa11.77□□□□□ -0.53
CKAP4-202ENST00000552828 PTSQ03393 145 aa11.77□□□□□ -0.53
CKAP4-202ENST00000552828 TLE1Q04724 770 aa11.77□□□□□ -0.53
CKAP4-202ENST00000552828 BIRC2Q13490 618 aa11.77□□□□□ -0.53
CKAP4-202ENST00000552828 PDK2Q15119 407 aa11.77□□□□□ -0.53
CKAP4-202ENST00000552828 PTPRRQ15256 657 aa11.77□□□□□ -0.53
CKAP4-202ENST00000552828 PYCR3Q53H96 274 aa11.77□□□□□ -0.53
CKAP4-202ENST00000552828 COLEC12Q5KU26 742 aa11.77□□□□□ -0.53
CKAP4-202ENST00000552828 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.77□□□□□ -0.53
CKAP4-202ENST00000552828 ZFYVE27Q5T4F4 411 aa11.77□□□□□ -0.53
CKAP4-202ENST00000552828 DCAF12Q5T6F0 453 aa11.77□□□□□ -0.53
CKAP4-202ENST00000552828 ARMC12Q5T9G4 340 aa11.77□□□□□ -0.53
CKAP4-202ENST00000552828 MARC1Q5VT66 337 aa11.77□□□□□ -0.53
CKAP4-202ENST00000552828 DENND2CQ68D51 928 aa11.77□□□□□ -0.53
CKAP4-202ENST00000552828 WDR74Q6RFH5 385 aaPredicted RBP11.77□□□□□ -0.53
CKAP4-202ENST00000552828 TMCO3Q6UWJ1 677 aa11.77□□□□□ -0.53
CKAP4-202ENST00000552828 USP45Q70EL2 814 aa11.77□□□□□ -0.53
CKAP4-202ENST00000552828 CPNE8Q86YQ8 564 aa11.77□□□□□ -0.53
CKAP4-202ENST00000552828 LRRC49Q8IUZ0 686 aa11.77□□□□□ -0.53
CKAP4-202ENST00000552828 MAP7D3Q8IWC1 876 aa11.77□□□□□ -0.53
CKAP4-202ENST00000552828 RAVER1Q8IY67 606 aaKnown RBP11.77□□□□□ -0.53
CKAP4-202ENST00000552828 CACNA2D3Q8IZS8 1091 aa11.77□□□□□ -0.53
CKAP4-202ENST00000552828 BBS5Q8N3I7 341 aa11.77□□□□□ -0.53
CKAP4-202ENST00000552828 SFRP1Q8N474 314 aa11.77□□□□□ -0.53
CKAP4-202ENST00000552828 TEX26Q8N6G2 289 aa11.77□□□□□ -0.53
CKAP4-202ENST00000552828 IL22RA1Q8N6P7 574 aa11.77□□□□□ -0.53
CKAP4-202ENST00000552828 ANP32BQ92688 251 aaKnown RBP11.77□□□□□ -0.53
CKAP4-202ENST00000552828 COX14Q96I36 57 aa11.77□□□□□ -0.53
CKAP4-202ENST00000552828 CATSPER2Q96P56 530 aa11.77□□□□□ -0.53
CKAP4-202ENST00000552828 CSPG4P5Q96PW8 444 aa11.77□□□□□ -0.53
CKAP4-202ENST00000552828 TEFMQ96QE5 360 aaKnown RBP11.77□□□□□ -0.53
CKAP4-202ENST00000552828 OR2M4Q96R27 311 aa11.77□□□□□ -0.53
CKAP4-202ENST00000552828 ABCG8Q9H221 673 aa11.77□□□□□ -0.53
CKAP4-202ENST00000552828 SUDS3Q9H7L9 328 aaPredicted RBP11.77□□□□□ -0.53
CKAP4-202ENST00000552828 PCDH18Q9HCL0 1135 aa11.77□□□□□ -0.53
CKAP4-202ENST00000552828 OCIAD1Q9NX40 245 aa11.77□□□□□ -0.53
CKAP4-202ENST00000552828 SLC39A1Q9NY26 324 aa11.77□□□□□ -0.53
CKAP4-202ENST00000552828 TMEM9Q9P0T7 183 aa11.77□□□□□ -0.53
CKAP4-202ENST00000552828 RCOR3Q9P2K3 495 aaPredicted RBP11.77□□□□□ -0.53
CKAP4-202ENST00000552828 REXO2Q9Y3B8 237 aaKnown RBP11.77□□□□□ -0.53
CKAP4-202ENST00000552828 ARHGEF17Q96PE2 2063 aaPredicted RBP11.77□□□□□ -0.53
CKAP4-202ENST00000552828 SPENQ96T58 3664 aaKnown RBP11.76□□□□□ -0.53
CKAP4-202ENST00000552828 RCCD1A6NED2 376 aa11.76□□□□□ -0.53
CKAP4-202ENST00000552828 ZNF891A8MT65 544 aaPredicted RBP11.76□□□□□ -0.53
CKAP4-202ENST00000552828 BTNL10A8MVZ5 291 aa11.76□□□□□ -0.53
CKAP4-202ENST00000552828 PJA2O43164 708 aa11.76□□□□□ -0.53
CKAP4-202ENST00000552828 SPOPO43791 374 aa11.76□□□□□ -0.53
CKAP4-202ENST00000552828 NRDCO43847 1150 aa11.76□□□□□ -0.53
CKAP4-202ENST00000552828 PDHA1P08559 390 aa11.76□□□□□ -0.53
CKAP4-202ENST00000552828 ZNF30P17039 623 aa11.76□□□□□ -0.53
CKAP4-202ENST00000552828 COMTP21964 271 aa11.76□□□□□ -0.53
CKAP4-202ENST00000552828 MPSTP25325 297 aa11.76□□□□□ -0.53
CKAP4-202ENST00000552828 MMP13P45452 471 aa11.76□□□□□ -0.53
CKAP4-202ENST00000552828 GPR1P46091 355 aa11.76□□□□□ -0.53
CKAP4-202ENST00000552828 MAXP61244 160 aa11.76□□□□□ -0.53
CKAP4-202ENST00000552828 KIF5AQ12840 1032 aa11.76□□□□□ -0.53
CKAP4-202ENST00000552828 KCNAB2Q13303 367 aa11.76□□□□□ -0.53
CKAP4-202ENST00000552828 ATP13A4Q4VNC1 1196 aa11.76□□□□□ -0.53
CKAP4-202ENST00000552828 LRRC38Q5VT99 294 aa11.76□□□□□ -0.53
CKAP4-202ENST00000552828 ALG1LQ6GMV1 187 aa11.76□□□□□ -0.53
CKAP4-202ENST00000552828 RFLNAQ6ZTI6 216 aa11.76□□□□□ -0.53
CKAP4-202ENST00000552828 ARHGAP22Q7Z5H3 698 aa11.76□□□□□ -0.53
CKAP4-202ENST00000552828 LRRC8AQ8IWT6 810 aa11.76□□□□□ -0.53
CKAP4-202ENST00000552828 RHOT1Q8IXI2 618 aa11.76□□□□□ -0.53
CKAP4-202ENST00000552828 NRSN1Q8IZ57 195 aa11.76□□□□□ -0.53
CKAP4-202ENST00000552828 ATPAF2Q8N5M1 289 aa11.76□□□□□ -0.53
CKAP4-202ENST00000552828 FAM71BQ8TC56 605 aa11.76□□□□□ -0.53
CKAP4-202ENST00000552828 AP2M1Q96CW1 435 aa11.76□□□□□ -0.53
CKAP4-202ENST00000552828 SLC45A3Q96JT2 553 aa11.76□□□□□ -0.53
CKAP4-202ENST00000552828 DESI2Q9BSY9 194 aa11.76□□□□□ -0.53
CKAP4-202ENST00000552828 TMEM98Q9Y2Y6 226 aa11.76□□□□□ -0.53
CKAP4-202ENST00000552828 ALG6Q9Y672 507 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms