RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 NDUFAF2Q8N183 169 aa12.93□□□□□ -0.34
NPAS3-209ENST00000551008 ZNF567Q8N184 647 aa12.93□□□□□ -0.34
NPAS3-209ENST00000551008 ARL14Q8N4G2 192 aa12.93□□□□□ -0.34
NPAS3-209ENST00000551008 LRRC57Q8N9N7 239 aa12.93□□□□□ -0.34
NPAS3-209ENST00000551008 ACRBPQ8NEB7 543 aa12.93□□□□□ -0.34
NPAS3-209ENST00000551008 ZDHHC1Q8WTX9 485 aa12.93□□□□□ -0.34
NPAS3-209ENST00000551008 GRAMD1AQ96CP6 724 aa12.93□□□□□ -0.34
NPAS3-209ENST00000551008 GFM1Q96RP9 751 aaKnown RBP12.93□□□□□ -0.34
NPAS3-209ENST00000551008 MAK16Q9BXY0 300 aaKnown RBP12.93□□□□□ -0.34
NPAS3-209ENST00000551008 GSDMCQ9BYG8 508 aa12.93□□□□□ -0.34
NPAS3-209ENST00000551008 UBP1Q9NZI7 540 aa12.93□□□□□ -0.34
NPAS3-209ENST00000551008 LRIT1Q9P2V4 623 aa12.93□□□□□ -0.34
NPAS3-209ENST00000551008 SHOC2Q9UQ13 582 aa12.93□□□□□ -0.34
NPAS3-209ENST00000551008 ZNF711Q9Y462 761 aa12.93□□□□□ -0.34
NPAS3-209ENST00000551008 CCDC187A0A096LP49 1063 aa12.92□□□□□ -0.34
NPAS3-209ENST00000551008 LOC285095A0A1B0GVY8 99 aa12.92□□□□□ -0.34
NPAS3-209ENST00000551008 A6NCN8 305 aa12.92□□□□□ -0.34
NPAS3-209ENST00000551008 F5H423 210 aaPredicted RBP12.92□□□□□ -0.34
NPAS3-209ENST00000551008 PMPCBO75439 489 aa12.92□□□□□ -0.34
NPAS3-209ENST00000551008 NDST3O95803 873 aa12.92□□□□□ -0.34
NPAS3-209ENST00000551008 HGFP14210 728 aa12.92□□□□□ -0.34
NPAS3-209ENST00000551008 CSF2RBP32927 897 aa12.92□□□□□ -0.34
NPAS3-209ENST00000551008 CA5AP35218 305 aa12.92□□□□□ -0.34
NPAS3-209ENST00000551008 CTNNA1P35221 906 aaKnown RBP12.92□□□□□ -0.34
NPAS3-209ENST00000551008 CYLC1P35663 651 aaPredicted RBP12.92□□□□□ -0.34
NPAS3-209ENST00000551008 ETV5P41161 510 aa12.92□□□□□ -0.34
NPAS3-209ENST00000551008 ACTR1BP42025 376 aa12.92□□□□□ -0.34
NPAS3-209ENST00000551008 OR1D5P58170 312 aa12.92□□□□□ -0.34
NPAS3-209ENST00000551008 DCDC1P59894 354 aa12.92□□□□□ -0.34
NPAS3-209ENST00000551008 ACTR1AP61163 376 aa12.92□□□□□ -0.34
NPAS3-209ENST00000551008 CFHR1Q03591 330 aa12.92□□□□□ -0.34
NPAS3-209ENST00000551008 CDK18Q07002 472 aa12.92□□□□□ -0.34
NPAS3-209ENST00000551008 PPP2R5EQ16537 467 aa12.92□□□□□ -0.34
NPAS3-209ENST00000551008 ZNF574Q6ZN55 896 aaPredicted RBP12.92□□□□□ -0.34
NPAS3-209ENST00000551008 ZC3H18Q86VM9 953 aaKnown RBP12.92□□□□□ -0.34
NPAS3-209ENST00000551008 TTC30BQ8N4P2 665 aa12.92□□□□□ -0.34
NPAS3-209ENST00000551008 OR6C4Q8NGE1 309 aa12.92□□□□□ -0.34
NPAS3-209ENST00000551008 EXD1Q8NHP7 514 aa12.92□□□□□ -0.34
NPAS3-209ENST00000551008 WDR36Q8NI36 951 aaKnown RBP12.92□□□□□ -0.34
NPAS3-209ENST00000551008 KIAA1524Q8TCG1 905 aa12.92□□□□□ -0.34
NPAS3-209ENST00000551008 TFB1MQ8WVM0 346 aaKnown RBP12.92□□□□□ -0.34
NPAS3-209ENST00000551008 ALG3Q92685 438 aa12.92□□□□□ -0.34
NPAS3-209ENST00000551008 NAF1Q96HR8 494 aaKnown RBP12.92□□□□□ -0.34
NPAS3-209ENST00000551008 MRGPRX2Q96LB1 330 aa12.92□□□□□ -0.34
NPAS3-209ENST00000551008 HEMGNQ9BXL5 484 aa12.92□□□□□ -0.34
NPAS3-209ENST00000551008 FAM83DQ9H4H8 585 aa12.92□□□□□ -0.34
NPAS3-209ENST00000551008 MAGEE1Q9HCI5 957 aa12.92□□□□□ -0.34
NPAS3-209ENST00000551008 ARFGAP3Q9NP61 516 aa12.92□□□□□ -0.34
NPAS3-209ENST00000551008 VPS18Q9P253 973 aa12.92□□□□□ -0.34
NPAS3-209ENST00000551008 TRIM10Q9UDY6 481 aa12.92□□□□□ -0.34
NPAS3-209ENST00000551008 GRID2IPA4D2P6 1211 aa12.91□□□□□ -0.34
NPAS3-209ENST00000551008 RGSL1A5PLK6 1076 aa12.91□□□□□ -0.34
NPAS3-209ENST00000551008 PRR19A6NJB7 356 aa12.91□□□□□ -0.34
NPAS3-209ENST00000551008 BTNL10A8MVZ5 291 aa12.91□□□□□ -0.34
NPAS3-209ENST00000551008 PJA2O43164 708 aa12.91□□□□□ -0.34
NPAS3-209ENST00000551008 ZRANB2O95218 330 aaKnown RBP eCLIP12.91□□□□□ -0.34
NPAS3-209ENST00000551008 PYGLP06737 847 aa12.91□□□□□ -0.34
NPAS3-209ENST00000551008 BPIP17213 487 aa12.91□□□□□ -0.34
NPAS3-209ENST00000551008 CD1CP29017 333 aa12.91□□□□□ -0.34
NPAS3-209ENST00000551008 UGT1A5P35504 534 aa12.91□□□□□ -0.34
NPAS3-209ENST00000551008 INHBCP55103 352 aa12.91□□□□□ -0.34
NPAS3-209ENST00000551008 WNT3AP56704 352 aa12.91□□□□□ -0.34
NPAS3-209ENST00000551008 PCBP4P57723 403 aaKnown RBP12.91□□□□□ -0.34
NPAS3-209ENST00000551008 C16orf72Q14CZ0 275 aa12.91□□□□□ -0.34
NPAS3-209ENST00000551008 ALS2CLQ60I27 953 aa12.91□□□□□ -0.34
NPAS3-209ENST00000551008 DAAM2Q86T65 1068 aa12.91□□□□□ -0.34
NPAS3-209ENST00000551008 TMTC1Q8IUR5 882 aa12.91□□□□□ -0.34
NPAS3-209ENST00000551008 RCOR2Q8IZ40 523 aa12.91□□□□□ -0.34
NPAS3-209ENST00000551008 LSMEM2Q8N112 164 aa12.91□□□□□ -0.34
NPAS3-209ENST00000551008 SLC37A2Q8TED4 501 aa12.91□□□□□ -0.34
NPAS3-209ENST00000551008 NUDT22Q9BRQ3 303 aa12.91□□□□□ -0.34
NPAS3-209ENST00000551008 ADGRE3Q9BY15 652 aa12.91□□□□□ -0.34
NPAS3-209ENST00000551008 CDH19Q9H159 772 aa12.91□□□□□ -0.34
NPAS3-209ENST00000551008 SEMA6CQ9H3T2 930 aa12.91□□□□□ -0.34
NPAS3-209ENST00000551008 ZFYVE1Q9HBF4 777 aa12.91□□□□□ -0.34
NPAS3-209ENST00000551008 RDH14Q9HBH5 336 aa12.91□□□□□ -0.34
NPAS3-209ENST00000551008 EPB41L5Q9HCM4 733 aa12.91□□□□□ -0.34
NPAS3-209ENST00000551008 HAUS2Q9NVX0 235 aa12.91□□□□□ -0.34
NPAS3-209ENST00000551008 PKD2L2Q9NZM6 624 aa12.91□□□□□ -0.34
NPAS3-209ENST00000551008 ATXN10Q9UBB4 475 aa12.91□□□□□ -0.34
NPAS3-209ENST00000551008 PCDHA3Q9Y5H8 950 aa12.91□□□□□ -0.34
NPAS3-209ENST00000551008 KALRNO60229 2985 aa12.91□□□□□ -0.34
NPAS3-209ENST00000551008 CFAP46Q8IYW2 2715 aa12.9□□□□□ -0.34
NPAS3-209ENST00000551008 BAHCC1Q9P281 2608 aa12.9□□□□□ -0.34
NPAS3-209ENST00000551008 APOC4-APOC2K7ER74 178 aa12.9□□□□□ -0.34
NPAS3-209ENST00000551008 GAPDHSO14556 408 aaPredicted RBP12.9□□□□□ -0.34
NPAS3-209ENST00000551008 PLD2O14939 933 aa12.9□□□□□ -0.34
NPAS3-209ENST00000551008 TNFSF15O95150 251 aa12.9□□□□□ -0.34
NPAS3-209ENST00000551008 APOC2P02655 101 aa12.9□□□□□ -0.34
NPAS3-209ENST00000551008 SLC4A1P02730 911 aa12.9□□□□□ -0.34
NPAS3-209ENST00000551008 ZNF8P17098 575 aaPredicted RBP12.9□□□□□ -0.34
NPAS3-209ENST00000551008 ITIH1P19827 911 aa12.9□□□□□ -0.34
NPAS3-209ENST00000551008 CTNNA2P26232 953 aa12.9□□□□□ -0.34
NPAS3-209ENST00000551008 PTPN7P35236 360 aa12.9□□□□□ -0.34
NPAS3-209ENST00000551008 SPA17Q15506 151 aa12.9□□□□□ -0.34
NPAS3-209ENST00000551008 SIRPB2Q5JXA9 342 aa12.9□□□□□ -0.34
NPAS3-209ENST00000551008 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.9□□□□□ -0.34
NPAS3-209ENST00000551008 PCSK4Q6UW60 755 aa12.9□□□□□ -0.34
NPAS3-209ENST00000551008 RAB11FIP2Q7L804 512 aa12.9□□□□□ -0.34
NPAS3-209ENST00000551008 ADGRG6Q86SQ4 1221 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms