RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 ATP13A4Q4VNC1 1196 aa21.52■■□□□ 1.04
SMARCC2-210ENST00000550519 DCAF12Q5T6F0 453 aa21.52■■□□□ 1.04
SMARCC2-210ENST00000550519 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.52■■□□□ 1.04
SMARCC2-210ENST00000550519 OR10G6Q8NH81 332 aa21.52■■□□□ 1.04
SMARCC2-210ENST00000550519 AHCYL2Q96HN2 611 aaKnown RBP21.52■■□□□ 1.04
SMARCC2-210ENST00000550519 SPRY4Q9C004 299 aa21.52■■□□□ 1.04
SMARCC2-210ENST00000550519 SLC25A18Q9H1K4 315 aa21.52■■□□□ 1.04
SMARCC2-210ENST00000550519 SARS2Q9NP81 518 aaKnown RBP21.52■■□□□ 1.04
SMARCC2-210ENST00000550519 ZNHIT2Q9UHR6 403 aa21.52■■□□□ 1.04
SMARCC2-210ENST00000550519 RPL26L1Q9UNX3 145 aaKnown RBP21.52■■□□□ 1.04
SMARCC2-210ENST00000550519 OAS3Q9Y6K5 1087 aaKnown RBP21.52■■□□□ 1.04
SMARCC2-210ENST00000550519 UBR5O95071 2799 aaPredicted RBP21.52■■□□□ 1.03
SMARCC2-210ENST00000550519 A0A087X0T9 212 aa21.51■■□□□ 1.03
SMARCC2-210ENST00000550519 DUX1O43812 170 aa21.51■■□□□ 1.03
SMARCC2-210ENST00000550519 RAD1O60671 282 aa21.51■■□□□ 1.03
SMARCC2-210ENST00000550519 SERPINC1P01008 464 aa21.51■■□□□ 1.03
SMARCC2-210ENST00000550519 ATP1A1P05023 1023 aaKnown RBP21.51■■□□□ 1.03
SMARCC2-210ENST00000550519 FAM228BP0C875 321 aa21.51■■□□□ 1.03
SMARCC2-210ENST00000550519 PBX1P40424 430 aa21.51■■□□□ 1.03
SMARCC2-210ENST00000550519 HHEXQ03014 270 aa21.51■■□□□ 1.03
SMARCC2-210ENST00000550519 NIPAL4Q0D2K0 466 aa21.51■■□□□ 1.03
SMARCC2-210ENST00000550519 IYDQ6PHW0 289 aa21.51■■□□□ 1.03
SMARCC2-210ENST00000550519 WDR74Q6RFH5 385 aaPredicted RBP21.51■■□□□ 1.03
SMARCC2-210ENST00000550519 ARHGAP22Q7Z5H3 698 aa21.51■■□□□ 1.03
SMARCC2-210ENST00000550519 FAM129CQ86XR2 697 aa21.51■■□□□ 1.03
SMARCC2-210ENST00000550519 CACNA2D3Q8IZS8 1091 aa21.51■■□□□ 1.03
SMARCC2-210ENST00000550519 ZNF670Q9BS34 389 aa21.51■■□□□ 1.03
SMARCC2-210ENST00000550519 ADNPQ9H2P0 1102 aa21.51■■□□□ 1.03
SMARCC2-210ENST00000550519 PCDH9Q9HC56 1237 aa21.51■■□□□ 1.03
SMARCC2-210ENST00000550519 TBC1D29Q9UFV1 150 aa21.51■■□□□ 1.03
SMARCC2-210ENST00000550519 PRKAB1Q9Y478 270 aa21.51■■□□□ 1.03
SMARCC2-210ENST00000550519 BSNQ9UPA5 3926 aa21.5■■□□□ 1.03
SMARCC2-210ENST00000550519 SERPING1P05155 500 aa21.5■■□□□ 1.03
SMARCC2-210ENST00000550519 HLA-DQB2P05538 268 aa21.5■■□□□ 1.03
SMARCC2-210ENST00000550519 CA4P22748 312 aa21.5■■□□□ 1.03
SMARCC2-210ENST00000550519 SSR1P43307 286 aaKnown RBP21.5■■□□□ 1.03
SMARCC2-210ENST00000550519 ANKRD20A8PQ5CZ79 823 aa21.5■■□□□ 1.03
SMARCC2-210ENST00000550519 HENMT1Q5T8I9 393 aaKnown RBP21.5■■□□□ 1.03
SMARCC2-210ENST00000550519 ANKS6Q68DC2 871 aa21.5■■□□□ 1.03
SMARCC2-210ENST00000550519 BORAQ6PGQ7 559 aa21.5■■□□□ 1.03
SMARCC2-210ENST00000550519 CHST15Q7LFX5 561 aaPredicted RBP21.5■■□□□ 1.03
SMARCC2-210ENST00000550519 LPCAT1Q8NF37 534 aa21.5■■□□□ 1.03
SMARCC2-210ENST00000550519 TEFMQ96QE5 360 aaKnown RBP21.5■■□□□ 1.03
SMARCC2-210ENST00000550519 HAUS2Q9NVX0 235 aa21.5■■□□□ 1.03
SMARCC2-210ENST00000550519 PILRAQ9UKJ1 303 aa21.5■■□□□ 1.03
SMARCC2-210ENST00000550519 TTLL3Q9Y4R7 772 aa21.5■■□□□ 1.03
SMARCC2-210ENST00000550519 A6NCN8 305 aa21.49■■□□□ 1.03
SMARCC2-210ENST00000550519 CYSRT1A8MQ03 144 aa21.49■■□□□ 1.03
SMARCC2-210ENST00000550519 FADS2P1A8MWK0 482 aa21.49■■□□□ 1.03
SMARCC2-210ENST00000550519 ARHGAP6O43182 974 aa21.49■■□□□ 1.03
SMARCC2-210ENST00000550519 SPINT3P49223 89 aa21.49■■□□□ 1.03
SMARCC2-210ENST00000550519 MC2RQ01718 297 aa21.49■■□□□ 1.03
SMARCC2-210ENST00000550519 PDK2Q15119 407 aa21.49■■□□□ 1.03
SMARCC2-210ENST00000550519 ALKBH5Q6P6C2 394 aaKnown RBP21.49■■□□□ 1.03
SMARCC2-210ENST00000550519 CPNE8Q86YQ8 564 aa21.49■■□□□ 1.03
SMARCC2-210ENST00000550519 RTP4Q96DX8 246 aa21.49■■□□□ 1.03
SMARCC2-210ENST00000550519 ZMYND15Q9H091 742 aa21.49■■□□□ 1.03
SMARCC2-210ENST00000550519 FAM83DQ9H4H8 585 aa21.49■■□□□ 1.03
SMARCC2-210ENST00000550519 RMI1Q9H9A7 625 aa21.49■■□□□ 1.03
SMARCC2-210ENST00000550519 C1orf232A0A0U1RR37 186 aa21.48■■□□□ 1.03
SMARCC2-210ENST00000550519 ZBED6P86452 979 aa21.48■■□□□ 1.03
SMARCC2-210ENST00000550519 NFATC2Q13469 925 aa21.48■■□□□ 1.03
SMARCC2-210ENST00000550519 QPCTQ16769 361 aa21.48■■□□□ 1.03
SMARCC2-210ENST00000550519 SNAP47Q5SQN1 464 aa21.48■■□□□ 1.03
SMARCC2-210ENST00000550519 PQLC3Q8N755 202 aa21.48■■□□□ 1.03
SMARCC2-210ENST00000550519 KCTD6Q8NC69 237 aa21.48■■□□□ 1.03
SMARCC2-210ENST00000550519 ZNF564Q8TBZ8 553 aaPredicted RBP21.48■■□□□ 1.03
SMARCC2-210ENST00000550519 LRRN4Q8WUT4 740 aa21.48■■□□□ 1.03
SMARCC2-210ENST00000550519 SH3KBP1Q96B97 665 aa21.48■■□□□ 1.03
SMARCC2-210ENST00000550519 FAF2Q96CS3 445 aa21.48■■□□□ 1.03
SMARCC2-210ENST00000550519 HERPUD2Q9BSE4 406 aa21.48■■□□□ 1.03
SMARCC2-210ENST00000550519 STN1Q9H668 368 aaKnown RBP21.48■■□□□ 1.03
SMARCC2-210ENST00000550519 KCNK6Q9Y257 313 aa21.48■■□□□ 1.03
SMARCC2-210ENST00000550519 RGSL1A5PLK6 1076 aa21.47■■□□□ 1.03
SMARCC2-210ENST00000550519 A8MU76 341 aa21.47■■□□□ 1.03
SMARCC2-210ENST00000550519 ANKRD66B4E2M5 251 aa21.47■■□□□ 1.03
SMARCC2-210ENST00000550519 CAPN5O15484 640 aaPredicted RBP21.47■■□□□ 1.03
SMARCC2-210ENST00000550519 MMP2P08253 660 aa21.47■■□□□ 1.03
SMARCC2-210ENST00000550519 MX2P20592 715 aa21.47■■□□□ 1.03
SMARCC2-210ENST00000550519 GJC1P36383 396 aa21.47■■□□□ 1.03
SMARCC2-210ENST00000550519 PPM1FP49593 454 aaPredicted RBP21.47■■□□□ 1.03
SMARCC2-210ENST00000550519 EPHA4P54764 986 aa21.47■■□□□ 1.03
SMARCC2-210ENST00000550519 GBE1Q04446 702 aa21.47■■□□□ 1.03
SMARCC2-210ENST00000550519 SLC10A2Q12908 348 aaPredicted RBP21.47■■□□□ 1.03
SMARCC2-210ENST00000550519 NFKBIBQ15653 356 aa21.47■■□□□ 1.03
SMARCC2-210ENST00000550519 LYSMD3Q7Z3D4 306 aa21.47■■□□□ 1.03
SMARCC2-210ENST00000550519 SLC9B2Q86UD5 537 aa21.47■■□□□ 1.03
SMARCC2-210ENST00000550519 MAP7D3Q8IWC1 876 aa21.47■■□□□ 1.03
SMARCC2-210ENST00000550519 NCSTNQ92542 709 aa21.47■■□□□ 1.03
SMARCC2-210ENST00000550519 HDAC11Q96DB2 347 aa21.47■■□□□ 1.03
SMARCC2-210ENST00000550519 SLC45A3Q96JT2 553 aa21.47■■□□□ 1.03
SMARCC2-210ENST00000550519 FBXO8Q9NRD0 319 aa21.47■■□□□ 1.03
SMARCC2-210ENST00000550519 PKD2L2Q9NZM6 624 aa21.47■■□□□ 1.03
SMARCC2-210ENST00000550519 TUBD1Q9UJT1 453 aa21.47■■□□□ 1.03
SMARCC2-210ENST00000550519 CAPN11Q9UMQ6 739 aa21.47■■□□□ 1.03
SMARCC2-210ENST00000550519 NENFQ9UMX5 172 aa21.47■■□□□ 1.03
SMARCC2-210ENST00000550519 KIR2DS5A0A0G2JLQ3 304 aa21.46■■□□□ 1.03
SMARCC2-210ENST00000550519 A0A0G2JNG1 304 aa21.46■■□□□ 1.03
SMARCC2-210ENST00000550519 ZNF891A8MT65 544 aaPredicted RBP21.46■■□□□ 1.03
SMARCC2-210ENST00000550519 KIR2DS3K7RE56 304 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 185.3 ms