RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 DOCK5Q9H7D0 1870 aa12.07□□□□□ -0.48
VDR-208ENST00000550325 PDZK1P1A8MUH7 402 aa12.07□□□□□ -0.48
VDR-208ENST00000550325 SPATA31C2B4DYI2 1134 aa12.07□□□□□ -0.48
VDR-208ENST00000550325 NUAK1O60285 661 aa12.07□□□□□ -0.48
VDR-208ENST00000550325 UGT2B11O75310 529 aa12.07□□□□□ -0.48
VDR-208ENST00000550325 CST1P01037 141 aa12.07□□□□□ -0.48
VDR-208ENST00000550325 EIF2S1P05198 315 aaKnown RBP12.07□□□□□ -0.48
VDR-208ENST00000550325 CD68P34810 354 aaPredicted RBP12.07□□□□□ -0.48
VDR-208ENST00000550325 PIGAP37287 484 aa12.07□□□□□ -0.48
VDR-208ENST00000550325 CHRNA4P43681 627 aa12.07□□□□□ -0.48
VDR-208ENST00000550325 LRIT3Q3SXY7 679 aa12.07□□□□□ -0.48
VDR-208ENST00000550325 TTC23Q5W5X9 447 aa12.07□□□□□ -0.48
VDR-208ENST00000550325 DESI1Q6ICB0 168 aa12.07□□□□□ -0.48
VDR-208ENST00000550325 PTGR2Q8N8N7 351 aaPredicted RBP12.07□□□□□ -0.48
VDR-208ENST00000550325 SLC2A14Q8TDB8 520 aa12.07□□□□□ -0.48
VDR-208ENST00000550325 ATL1Q8WXF7 558 aa12.07□□□□□ -0.48
VDR-208ENST00000550325 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.07□□□□□ -0.48
VDR-208ENST00000550325 ZNF641Q96N77 438 aaPredicted RBP12.07□□□□□ -0.48
VDR-208ENST00000550325 DEFB129Q9H1M3 183 aa12.07□□□□□ -0.48
VDR-208ENST00000550325 ERVK-18Q9QC07 812 aa12.07□□□□□ -0.48
VDR-208ENST00000550325 UGT2A1Q9Y4X1 527 aa12.07□□□□□ -0.48
VDR-208ENST00000550325 NUP205Q92621 2012 aa12.07□□□□□ -0.48
VDR-208ENST00000550325 MAFO75444 373 aaPredicted RBP12.06□□□□□ -0.48
VDR-208ENST00000550325 LTA4HP09960 611 aaKnown RBP12.06□□□□□ -0.48
VDR-208ENST00000550325 CHRNB1P11230 501 aa12.06□□□□□ -0.48
VDR-208ENST00000550325 SPNP16150 400 aa12.06□□□□□ -0.48
VDR-208ENST00000550325 CYP2B6P20813 491 aa12.06□□□□□ -0.48
VDR-208ENST00000550325 ATICP31939 592 aa12.06□□□□□ -0.48
VDR-208ENST00000550325 ALDH7A1P49419 539 aaKnown RBP12.06□□□□□ -0.48
VDR-208ENST00000550325 ALDH3A2P51648 485 aa12.06□□□□□ -0.48
VDR-208ENST00000550325 FOXD4Q12950 439 aaPredicted RBP12.06□□□□□ -0.48
VDR-208ENST00000550325 KCNAB2Q13303 367 aa12.06□□□□□ -0.48
VDR-208ENST00000550325 PSMD5Q16401 504 aa12.06□□□□□ -0.48
VDR-208ENST00000550325 PAGE3Q5JUK9 113 aa12.06□□□□□ -0.48
VDR-208ENST00000550325 ARHGAP36Q6ZRI8 547 aa12.06□□□□□ -0.48
VDR-208ENST00000550325 PIM3Q86V86 326 aa12.06□□□□□ -0.48
VDR-208ENST00000550325 MINDY2Q8NBR6 621 aa12.06□□□□□ -0.48
VDR-208ENST00000550325 FAM83FQ8NEG4 500 aaPredicted RBP12.06□□□□□ -0.48
VDR-208ENST00000550325 SLC35F5Q8WV83 523 aa12.06□□□□□ -0.48
VDR-208ENST00000550325 NSUN5Q96P11 429 aaKnown RBP12.06□□□□□ -0.48
VDR-208ENST00000550325 GPR78Q96P69 363 aa12.06□□□□□ -0.48
VDR-208ENST00000550325 CDK5RAP1Q96SZ6 601 aaKnown RBP12.06□□□□□ -0.48
VDR-208ENST00000550325 HBEGFQ99075 208 aa12.06□□□□□ -0.48
VDR-208ENST00000550325 MRIQ9BWK5 157 aa12.06□□□□□ -0.48
VDR-208ENST00000550325 HOXD1Q9GZZ0 328 aa12.06□□□□□ -0.48
VDR-208ENST00000550325 MRGBPQ9NV56 204 aa12.06□□□□□ -0.48
VDR-208ENST00000550325 ADPRHL2Q9NX46 363 aa12.06□□□□□ -0.48
VDR-208ENST00000550325 IL37Q9NZH6 218 aa12.06□□□□□ -0.48
VDR-208ENST00000550325 DNMT3BQ9UBC3 853 aaKnown RBP12.06□□□□□ -0.48
VDR-208ENST00000550325 TARM1B6A8C7 271 aa12.06□□□□□ -0.48
VDR-208ENST00000550325 NPM3O75607 178 aaKnown RBP12.06□□□□□ -0.48
VDR-208ENST00000550325 UBA1P22314 1058 aaKnown RBP12.06□□□□□ -0.48
VDR-208ENST00000550325 NDUFV1P49821 464 aa12.06□□□□□ -0.48
VDR-208ENST00000550325 HMGCS2P54868 508 aa12.06□□□□□ -0.48
VDR-208ENST00000550325 SYT16Q17RD7 645 aa12.06□□□□□ -0.48
VDR-208ENST00000550325 FAM98BQ52LJ0 330 aaKnown RBP12.06□□□□□ -0.48
VDR-208ENST00000550325 LARP4Q71RC2 724 aaKnown RBP eCLIP12.06□□□□□ -0.48
VDR-208ENST00000550325 LPAR1Q92633 364 aa12.06□□□□□ -0.48
VDR-208ENST00000550325 PROX1Q92786 737 aa12.06□□□□□ -0.48
VDR-208ENST00000550325 PABPC5Q96DU9 382 aaKnown RBP12.06□□□□□ -0.48
VDR-208ENST00000550325 C2orf40Q9H1Z8 148 aa12.06□□□□□ -0.48
VDR-208ENST00000550325 SCUBE2Q9NQ36 999 aa12.06□□□□□ -0.48
VDR-208ENST00000550325 ORC6Q9Y5N6 252 aa12.06□□□□□ -0.48
VDR-208ENST00000550325 ERI2A8K979 691 aaKnown RBP12.06□□□□□ -0.48
VDR-208ENST00000550325 BBIP1A8MTZ0 92 aa12.06□□□□□ -0.48
VDR-208ENST00000550325 GP2P55259 537 aaKnown RBP12.06□□□□□ -0.48
VDR-208ENST00000550325 DAB2P98082 770 aa12.06□□□□□ -0.48
VDR-208ENST00000550325 CTU2Q2VPK5 515 aaKnown RBP12.06□□□□□ -0.48
VDR-208ENST00000550325 FAM209AQ5JX71 171 aa12.06□□□□□ -0.48
VDR-208ENST00000550325 RBM48Q5RL73 367 aaKnown RBP12.06□□□□□ -0.48
VDR-208ENST00000550325 SYPL2Q5VXT5 272 aa12.06□□□□□ -0.48
VDR-208ENST00000550325 RAB44Q7Z6P3 723 aaPredicted RBP12.06□□□□□ -0.48
VDR-208ENST00000550325 CTU1Q7Z7A3 348 aaKnown RBP12.06□□□□□ -0.48
VDR-208ENST00000550325 CHDHQ8NE62 594 aaPredicted RBP12.06□□□□□ -0.48
VDR-208ENST00000550325 ANKRD49Q8WVL7 239 aa12.06□□□□□ -0.48
VDR-208ENST00000550325 MED10Q9BTT4 135 aa12.06□□□□□ -0.48
VDR-208ENST00000550325 RIBC2Q9H4K1 309 aa12.06□□□□□ -0.48
VDR-208ENST00000550325 MAGEE1Q9HCI5 957 aa12.06□□□□□ -0.48
VDR-208ENST00000550325 DNAJC15Q9Y5T4 150 aa12.06□□□□□ -0.48
VDR-208ENST00000550325 SIPA1L1O43166 1804 aa12.06□□□□□ -0.48
VDR-208ENST00000550325 LOC100506127A0A0U1RQW1 187 aa12.05□□□□□ -0.48
VDR-208ENST00000550325 FXYD1O00168 92 aa12.05□□□□□ -0.48
VDR-208ENST00000550325 HSD17B1P14061 328 aa12.05□□□□□ -0.48
VDR-208ENST00000550325 LBPP18428 481 aa12.05□□□□□ -0.48
VDR-208ENST00000550325 BMPR1AP36894 532 aa12.05□□□□□ -0.48
VDR-208ENST00000550325 TNFAIP2Q03169 654 aa12.05□□□□□ -0.48
VDR-208ENST00000550325 CTF1Q16619 201 aa12.05□□□□□ -0.48
VDR-208ENST00000550325 SLC10A6Q3KNW5 377 aa12.05□□□□□ -0.48
VDR-208ENST00000550325 UGT3A2Q3SY77 523 aa12.05□□□□□ -0.48
VDR-208ENST00000550325 LRRC49Q8IUZ0 686 aa12.05□□□□□ -0.48
VDR-208ENST00000550325 CLYBLQ8N0X4 340 aa12.05□□□□□ -0.48
VDR-208ENST00000550325 SUN5Q8TC36 379 aa12.05□□□□□ -0.48
VDR-208ENST00000550325 FRS2Q8WU20 508 aa12.05□□□□□ -0.48
VDR-208ENST00000550325 CCDC126Q96EE4 140 aa12.05□□□□□ -0.48
VDR-208ENST00000550325 CEP295NLQ96MC4 621 aa12.05□□□□□ -0.48
VDR-208ENST00000550325 FAM118AQ9NWS6 357 aa12.05□□□□□ -0.48
VDR-208ENST00000550325 MAP3K20Q9NYL2 800 aaKnown RBP12.05□□□□□ -0.48
VDR-208ENST00000550325 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.05□□□□□ -0.48
VDR-208ENST00000550325 A0A087X1B8 175 aa12.05□□□□□ -0.48
VDR-208ENST00000550325 CLDN5O00501 218 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms