RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 ZNF140P52738 457 aaPredicted RBP22.36■■□□□ 1.17
BRF1-216ENST00000550208 SEPT6Q14141 434 aa22.36■■□□□ 1.17
BRF1-216ENST00000550208 PPP1R7Q15435 360 aa22.36■■□□□ 1.17
BRF1-216ENST00000550208 TCEA2Q15560 299 aa22.36■■□□□ 1.17
BRF1-216ENST00000550208 ATP13A5Q4VNC0 1218 aa22.36■■□□□ 1.17
BRF1-216ENST00000550208 FAM151BQ6UXP7 276 aa22.36■■□□□ 1.17
BRF1-216ENST00000550208 LRRC61Q9BV99 259 aa22.36■■□□□ 1.17
BRF1-216ENST00000550208 SLC32A1Q9H598 525 aa22.36■■□□□ 1.17
BRF1-216ENST00000550208 SUDS3Q9H7L9 328 aaPredicted RBP22.36■■□□□ 1.17
BRF1-216ENST00000550208 UGT1A7Q9HAW7 530 aa22.36■■□□□ 1.17
BRF1-216ENST00000550208 UGT1A10Q9HAW8 530 aa22.36■■□□□ 1.17
BRF1-216ENST00000550208 UGT1A8Q9HAW9 530 aa22.36■■□□□ 1.17
BRF1-216ENST00000550208 FKBPLQ9UIM3 349 aa22.36■■□□□ 1.17
BRF1-216ENST00000550208 PCNX2A6NKB5 2137 aa22.36■■□□□ 1.17
BRF1-216ENST00000550208 GLYATL1P3A0A0U1RQE8 302 aa22.35■■□□□ 1.17
BRF1-216ENST00000550208 PRSS38A1L453 326 aa22.35■■□□□ 1.17
BRF1-216ENST00000550208 CCDC188H7C350 402 aa22.35■■□□□ 1.17
BRF1-216ENST00000550208 CCL22O00626 93 aa22.35■■□□□ 1.17
BRF1-216ENST00000550208 TRIM38O00635 465 aa22.35■■□□□ 1.17
BRF1-216ENST00000550208 GAPDHSO14556 408 aaPredicted RBP22.35■■□□□ 1.17
BRF1-216ENST00000550208 FFAR2O15552 330 aa22.35■■□□□ 1.17
BRF1-216ENST00000550208 SLC25A14O95258 325 aaPredicted RBP22.35■■□□□ 1.17
BRF1-216ENST00000550208 CELA2BP08218 269 aaPredicted RBP22.35■■□□□ 1.17
BRF1-216ENST00000550208 CTSEP14091 401 aa22.35■■□□□ 1.17
BRF1-216ENST00000550208 TPSB2P20231 275 aa22.35■■□□□ 1.17
BRF1-216ENST00000550208 NOVA1P51513 510 aaKnown RBP22.35■■□□□ 1.17
BRF1-216ENST00000550208 PDE1BQ01064 536 aa22.35■■□□□ 1.17
BRF1-216ENST00000550208 KCNJ11Q14654 390 aa22.35■■□□□ 1.17
BRF1-216ENST00000550208 TPSAB1Q15661 275 aa22.35■■□□□ 1.17
BRF1-216ENST00000550208 CCDC38Q502W7 563 aa22.35■■□□□ 1.17
BRF1-216ENST00000550208 ANKRD22Q5VYY1 191 aa22.35■■□□□ 1.17
BRF1-216ENST00000550208 PDPK2PQ6A1A2 396 aa22.35■■□□□ 1.17
BRF1-216ENST00000550208 DTX3LQ8TDB6 740 aa22.35■■□□□ 1.17
BRF1-216ENST00000550208 CPT1BQ92523 772 aa22.35■■□□□ 1.17
BRF1-216ENST00000550208 SLCO2A1Q92959 643 aa22.35■■□□□ 1.17
BRF1-216ENST00000550208 GLYATL1Q969I3 302 aa22.35■■□□□ 1.17
BRF1-216ENST00000550208 CARS2Q9HA77 564 aaKnown RBP22.35■■□□□ 1.17
BRF1-216ENST00000550208 SUFUQ9UMX1 484 aa22.35■■□□□ 1.17
BRF1-216ENST00000550208 CSNK1G3Q9Y6M4 447 aa22.35■■□□□ 1.17
BRF1-216ENST00000550208 CCDC78A2IDD5 438 aa22.34■■□□□ 1.17
BRF1-216ENST00000550208 MAGEA6P43360 314 aa22.34■■□□□ 1.17
BRF1-216ENST00000550208 SESN2P58004 480 aaPredicted RBP22.34■■□□□ 1.17
BRF1-216ENST00000550208 XIAPP98170 497 aa22.34■■□□□ 1.17
BRF1-216ENST00000550208 MICALCLQ6ZW33 695 aa22.34■■□□□ 1.17
BRF1-216ENST00000550208 MARK2Q7KZI7 788 aaKnown RBP22.34■■□□□ 1.17
BRF1-216ENST00000550208 ZNF398Q8TD17 642 aa22.34■■□□□ 1.17
BRF1-216ENST00000550208 ZNF592Q92610 1267 aa22.34■■□□□ 1.17
BRF1-216ENST00000550208 SCARF2Q96GP6 870 aaPredicted RBP22.34■■□□□ 1.17
BRF1-216ENST00000550208 DNAJC1Q96KC8 554 aaKnown RBP22.34■■□□□ 1.17
BRF1-216ENST00000550208 TMEM168Q9H0V1 697 aa22.34■■□□□ 1.17
BRF1-216ENST00000550208 NLE1Q9NVX2 485 aaPredicted RBP22.34■■□□□ 1.17
BRF1-216ENST00000550208 ARID1BQ8NFD5 2236 aaPredicted RBP22.34■■□□□ 1.17
BRF1-216ENST00000550208 SPTBN4Q9H254 2564 aa22.34■■□□□ 1.17
BRF1-216ENST00000550208 MYLKQ15746 1914 aa22.33■■□□□ 1.17
BRF1-216ENST00000550208 NEMP2A6NFY4 417 aa22.33■■□□□ 1.17
BRF1-216ENST00000550208 MROH6A6NGR9 719 aa22.33■■□□□ 1.17
BRF1-216ENST00000550208 YY2O15391 372 aa22.33■■□□□ 1.17
BRF1-216ENST00000550208 GPR39O43194 453 aa22.33■■□□□ 1.17
BRF1-216ENST00000550208 IVLP07476 585 aa22.33■■□□□ 1.17
BRF1-216ENST00000550208 CEACAM1P13688 526 aa22.33■■□□□ 1.17
BRF1-216ENST00000550208 KCNA4P22459 653 aa22.33■■□□□ 1.17
BRF1-216ENST00000550208 ADRA1DP25100 572 aa22.33■■□□□ 1.17
BRF1-216ENST00000550208 ADCY8P40145 1251 aa22.33■■□□□ 1.17
BRF1-216ENST00000550208 GNPDA1P46926 289 aa22.33■■□□□ 1.17
BRF1-216ENST00000550208 NPY2RP49146 381 aa22.33■■□□□ 1.17
BRF1-216ENST00000550208 CDK16Q00536 496 aa22.33■■□□□ 1.17
BRF1-216ENST00000550208 PTK6Q13882 451 aa22.33■■□□□ 1.17
BRF1-216ENST00000550208 TRIP6Q15654 476 aaKnown RBP22.33■■□□□ 1.17
BRF1-216ENST00000550208 INAVAQ3KP66 663 aa22.33■■□□□ 1.17
BRF1-216ENST00000550208 PSAPL1Q6NUJ1 521 aa22.33■■□□□ 1.17
BRF1-216ENST00000550208 LRRC8BQ6P9F7 803 aa22.33■■□□□ 1.17
BRF1-216ENST00000550208 ZNF534Q76KX8 674 aa22.33■■□□□ 1.17
BRF1-216ENST00000550208 BAHD1Q8TBE0 780 aaPredicted RBP22.33■■□□□ 1.17
BRF1-216ENST00000550208 STYXQ8WUJ0 223 aa22.33■■□□□ 1.17
BRF1-216ENST00000550208 TBATAQ96M53 351 aa22.33■■□□□ 1.17
BRF1-216ENST00000550208 KRT12Q99456 494 aa22.33■■□□□ 1.17
BRF1-216ENST00000550208 TRIM39Q9HCM9 518 aa22.33■■□□□ 1.17
BRF1-216ENST00000550208 ATXN10Q9UBB4 475 aa22.33■■□□□ 1.17
BRF1-216ENST00000550208 LRP4O75096 1905 aa22.33■■□□□ 1.16
BRF1-216ENST00000550208 SPAARA0A1B0GVQ0 90 aa22.32■■□□□ 1.16
BRF1-216ENST00000550208 SIGLEC6O43699 453 aa22.32■■□□□ 1.16
BRF1-216ENST00000550208 URI1O94763 535 aaPredicted RBP22.32■■□□□ 1.16
BRF1-216ENST00000550208 DR1Q01658 176 aa22.32■■□□□ 1.16
BRF1-216ENST00000550208 PEX6Q13608 980 aa22.32■■□□□ 1.16
BRF1-216ENST00000550208 ELOCQ15369 112 aa22.32■■□□□ 1.16
BRF1-216ENST00000550208 DEFB133Q30KQ1 61 aa22.32■■□□□ 1.16
BRF1-216ENST00000550208 ADGRG6Q86SQ4 1221 aa22.32■■□□□ 1.16
BRF1-216ENST00000550208 FSTL5Q8N475 847 aaPredicted RBP22.32■■□□□ 1.16
BRF1-216ENST00000550208 SPATA4Q8NEY3 305 aa22.32■■□□□ 1.16
BRF1-216ENST00000550208 OR4C6Q8NH72 309 aa22.32■■□□□ 1.16
BRF1-216ENST00000550208 CCL4L1Q8NHW4 92 aa22.32■■□□□ 1.16
BRF1-216ENST00000550208 CDKN2AIPNLQ96HQ2 116 aa22.32■■□□□ 1.16
BRF1-216ENST00000550208 RUNDC3BQ96NL0 473 aa22.32■■□□□ 1.16
BRF1-216ENST00000550208 VPS35Q96QK1 796 aa22.32■■□□□ 1.16
BRF1-216ENST00000550208 RANBP9Q96S59 729 aa22.32■■□□□ 1.16
BRF1-216ENST00000550208 C19orf43Q9BQ61 176 aa22.32■■□□□ 1.16
BRF1-216ENST00000550208 ASIC3Q9UHC3 531 aa22.32■■□□□ 1.16
BRF1-216ENST00000550208 APPL1Q9UKG1 709 aa22.32■■□□□ 1.16
BRF1-216ENST00000550208 PLEKHM1Q9Y4G2 1056 aa22.32■■□□□ 1.16
BRF1-216ENST00000550208 GPSM3Q9Y4H4 160 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms