RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 TMPRSS11EQ9UL52 423 aa21.05■□□□□ 0.96
VPS29-206ENST00000549578 CNOT6Q9ULM6 557 aaKnown RBP21.05■□□□□ 0.96
VPS29-206ENST00000549578 ZCWPW2A0A1B0GU75 182 aa21.04■□□□□ 0.96
VPS29-206ENST00000549578 PATE3B3GLJ2 98 aa21.04■□□□□ 0.96
VPS29-206ENST00000549578 VAPBO95292 243 aa21.04■□□□□ 0.96
VPS29-206ENST00000549578 GOT2P00505 430 aaKnown RBP21.04■□□□□ 0.96
VPS29-206ENST00000549578 POLBP06746 335 aa21.04■□□□□ 0.96
VPS29-206ENST00000549578 ARNTP27540 789 aa21.04■□□□□ 0.96
VPS29-206ENST00000549578 TEAD1P28347 426 aa21.04■□□□□ 0.96
VPS29-206ENST00000549578 HOXD12P35452 270 aa21.04■□□□□ 0.96
VPS29-206ENST00000549578 RABIFP47224 123 aa21.04■□□□□ 0.96
VPS29-206ENST00000549578 CDKN1CP49918 316 aaPredicted RBP21.04■□□□□ 0.96
VPS29-206ENST00000549578 CDK3Q00526 305 aa21.04■□□□□ 0.96
VPS29-206ENST00000549578 NFATC2Q13469 925 aa21.04■□□□□ 0.96
VPS29-206ENST00000549578 ZRANB3Q5FWF4 1079 aa21.04■□□□□ 0.96
VPS29-206ENST00000549578 SLC22A18ASQ8N1D0 253 aa21.04■□□□□ 0.96
VPS29-206ENST00000549578 ZNF398Q8TD17 642 aa21.04■□□□□ 0.96
VPS29-206ENST00000549578 DTX3LQ8TDB6 740 aa21.04■□□□□ 0.96
VPS29-206ENST00000549578 TEX101Q9BY14 249 aa21.04■□□□□ 0.96
VPS29-206ENST00000549578 PHACTR1Q9C0D0 580 aa21.04■□□□□ 0.96
VPS29-206ENST00000549578 SMOC1Q9H4F8 434 aa21.04■□□□□ 0.96
VPS29-206ENST00000549578 ASB8Q9H765 288 aa21.04■□□□□ 0.96
VPS29-206ENST00000549578 PLAC1Q9HBJ0 212 aa21.04■□□□□ 0.96
VPS29-206ENST00000549578 IL1RAPL1Q9NZN1 696 aa21.04■□□□□ 0.96
VPS29-206ENST00000549578 PCDHGA5Q9Y5G8 931 aa21.04■□□□□ 0.96
VPS29-206ENST00000549578 SLC30A1Q9Y6M5 507 aa21.04■□□□□ 0.96
VPS29-206ENST00000549578 A0A1B0GVT2 93 aa21.04■□□□□ 0.96
VPS29-206ENST00000549578 PRR5-ARHGAP8B1AHC4 643 aa21.04■□□□□ 0.96
VPS29-206ENST00000549578 CFIP05156 583 aa21.04■□□□□ 0.96
VPS29-206ENST00000549578 PYGLP06737 847 aa21.04■□□□□ 0.96
VPS29-206ENST00000549578 ITGALP20701 1170 aa21.04■□□□□ 0.96
VPS29-206ENST00000549578 DPP6P42658 865 aa21.04■□□□□ 0.96
VPS29-206ENST00000549578 ITGA9Q13797 1035 aa21.04■□□□□ 0.96
VPS29-206ENST00000549578 PDE1CQ14123 709 aaPredicted RBP21.04■□□□□ 0.96
VPS29-206ENST00000549578 CRYMQ14894 314 aa21.04■□□□□ 0.96
VPS29-206ENST00000549578 PDPK2PQ6A1A2 396 aa21.04■□□□□ 0.96
VPS29-206ENST00000549578 KIAA0930Q6ICG6 404 aaPredicted RBP21.04■□□□□ 0.96
VPS29-206ENST00000549578 AFTPHQ6ULP2 937 aa21.04■□□□□ 0.96
VPS29-206ENST00000549578 UNC5AQ6ZN44 842 aa21.04■□□□□ 0.96
VPS29-206ENST00000549578 IQCHQ86VS3 1027 aa21.04■□□□□ 0.96
VPS29-206ENST00000549578 PYROXD1Q8WU10 500 aa21.04■□□□□ 0.96
VPS29-206ENST00000549578 GLYATL1Q969I3 302 aa21.04■□□□□ 0.96
VPS29-206ENST00000549578 HIC2Q96JB3 615 aa21.04■□□□□ 0.96
VPS29-206ENST00000549578 ARFGAP3Q9NP61 516 aa21.04■□□□□ 0.96
VPS29-206ENST00000549578 FSCN3Q9NQT6 498 aa21.04■□□□□ 0.96
VPS29-206ENST00000549578 PHPT1Q9NRX4 125 aaPredicted RBP21.04■□□□□ 0.96
VPS29-206ENST00000549578 PI4KAP42356 2102 aa21.03■□□□□ 0.96
VPS29-206ENST00000549578 GOLGA8KD6RF30 607 aa21.03■□□□□ 0.96
VPS29-206ENST00000549578 GOLGA8TH3BQL2 631 aa21.03■□□□□ 0.96
VPS29-206ENST00000549578 TLR4O00206 839 aa21.03■□□□□ 0.96
VPS29-206ENST00000549578 VILLO15195 856 aa21.03■□□□□ 0.96
VPS29-206ENST00000549578 LMNAP02545 664 aaKnown RBP21.03■□□□□ 0.96
VPS29-206ENST00000549578 RETP07949 1114 aa21.03■□□□□ 0.96
VPS29-206ENST00000549578 MYBL2P10244 700 aa21.03■□□□□ 0.96
VPS29-206ENST00000549578 PAMP19021 973 aa21.03■□□□□ 0.96
VPS29-206ENST00000549578 FOXN2P32314 431 aa21.03■□□□□ 0.96
VPS29-206ENST00000549578 YPEL5P62699 121 aa21.03■□□□□ 0.96
VPS29-206ENST00000549578 NAA30Q147X3 362 aaPredicted RBP21.03■□□□□ 0.96
VPS29-206ENST00000549578 TEAD4Q15561 434 aa21.03■□□□□ 0.96
VPS29-206ENST00000549578 DUOXA1Q1HG43 343 aa21.03■□□□□ 0.96
VPS29-206ENST00000549578 PSAPL1Q6NUJ1 521 aa21.03■□□□□ 0.96
VPS29-206ENST00000549578 SNX20Q7Z614 316 aa21.03■□□□□ 0.96
VPS29-206ENST00000549578 CCNJLQ8IV13 435 aa21.03■□□□□ 0.96
VPS29-206ENST00000549578 PIANPQ8IYJ0 282 aa21.03■□□□□ 0.96
VPS29-206ENST00000549578 UNC5BQ8IZJ1 945 aa21.03■□□□□ 0.96
VPS29-206ENST00000549578 PNPLA1Q8N8W4 532 aa21.03■□□□□ 0.96
VPS29-206ENST00000549578 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.03■□□□□ 0.96
VPS29-206ENST00000549578 OR4L1Q8NH43 312 aa21.03■□□□□ 0.96
VPS29-206ENST00000549578 FAM174AQ8TBP5 190 aa21.03■□□□□ 0.96
VPS29-206ENST00000549578 BTN2A2Q8WVV5 523 aa21.03■□□□□ 0.96
VPS29-206ENST00000549578 C9orf72Q96LT7 481 aa21.03■□□□□ 0.96
VPS29-206ENST00000549578 PHOX2BQ99453 314 aa21.03■□□□□ 0.96
VPS29-206ENST00000549578 GPR27Q9NS67 375 aa21.03■□□□□ 0.96
VPS29-206ENST00000549578 CRLS1Q9UJA2 301 aa21.03■□□□□ 0.96
VPS29-206ENST00000549578 GMEB2Q9UKD1 530 aa21.03■□□□□ 0.96
VPS29-206ENST00000549578 FAM169AQ9Y6X4 670 aa21.03■□□□□ 0.96
VPS29-206ENST00000549578 LAMA1P25391 3075 aa21.03■□□□□ 0.96
VPS29-206ENST00000549578 KNL1Q8NG31 2342 aa21.02■□□□□ 0.96
VPS29-206ENST00000549578 PLXNB3Q9ULL4 1909 aa21.02■□□□□ 0.96
VPS29-206ENST00000549578 WDR87Q6ZQQ6 2873 aa21.02■□□□□ 0.96
VPS29-206ENST00000549578 CACNB4O00305 520 aaPredicted RBP21.02■□□□□ 0.96
VPS29-206ENST00000549578 SLC25A14O95258 325 aaPredicted RBP21.02■□□□□ 0.96
VPS29-206ENST00000549578 TTC4O95801 387 aa21.02■□□□□ 0.96
VPS29-206ENST00000549578 MYCLP1P12525 358 aaPredicted RBP21.02■□□□□ 0.96
VPS29-206ENST00000549578 MAGEA4P43358 317 aa21.02■□□□□ 0.96
VPS29-206ENST00000549578 ARCN1P48444 511 aaKnown RBP21.02■□□□□ 0.96
VPS29-206ENST00000549578 THOP1P52888 689 aa21.02■□□□□ 0.96
VPS29-206ENST00000549578 CACNG1Q06432 222 aa21.02■□□□□ 0.96
VPS29-206ENST00000549578 OVGP1Q12889 678 aa21.02■□□□□ 0.96
VPS29-206ENST00000549578 NFATC4Q14934 902 aa21.02■□□□□ 0.96
VPS29-206ENST00000549578 SPANXN3Q5MJ09 141 aa21.02■□□□□ 0.96
VPS29-206ENST00000549578 ZNF648Q5T619 568 aaPredicted RBP21.02■□□□□ 0.96
VPS29-206ENST00000549578 CAPN12Q6ZSI9 719 aa21.02■□□□□ 0.96
VPS29-206ENST00000549578 CEP76Q8TAP6 659 aa21.02■□□□□ 0.96
VPS29-206ENST00000549578 COX14Q96I36 57 aa21.02■□□□□ 0.96
VPS29-206ENST00000549578 VPS35Q96QK1 796 aa21.02■□□□□ 0.96
VPS29-206ENST00000549578 SMOXQ9NWM0 555 aa21.02■□□□□ 0.96
VPS29-206ENST00000549578 OAS3Q9Y6K5 1087 aaKnown RBP21.02■□□□□ 0.96
VPS29-206ENST00000549578 TOR1BO14657 336 aa21.01■□□□□ 0.95
VPS29-206ENST00000549578 MTX2O75431 263 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms