RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 GOLGA8CPA6NN73 597 aa9.92□□□□□ -0.82
RAB5B-206ENST00000549505 GRM6O15303 877 aa9.92□□□□□ -0.82
RAB5B-206ENST00000549505 VPS26AO75436 327 aa9.92□□□□□ -0.82
RAB5B-206ENST00000549505 PSMG1O95456 288 aa9.92□□□□□ -0.82
RAB5B-206ENST00000549505 MATN4O95460 622 aa9.92□□□□□ -0.82
RAB5B-206ENST00000549505 IRF1P10914 325 aa9.92□□□□□ -0.82
RAB5B-206ENST00000549505 SRCP12931 536 aa9.92□□□□□ -0.82
RAB5B-206ENST00000549505 CCR2P41597 374 aa9.92□□□□□ -0.82
RAB5B-206ENST00000549505 GLRBP48167 497 aa9.92□□□□□ -0.82
RAB5B-206ENST00000549505 GRAMD4Q6IC98 578 aa9.92□□□□□ -0.82
RAB5B-206ENST00000549505 PSAPL1Q6NUJ1 521 aa9.92□□□□□ -0.82
RAB5B-206ENST00000549505 PIM3Q86V86 326 aa9.92□□□□□ -0.82
RAB5B-206ENST00000549505 PDPRQ8NCN5 879 aa9.92□□□□□ -0.82
RAB5B-206ENST00000549505 NUDT4Q9NZJ9 180 aa9.92□□□□□ -0.82
RAB5B-206ENST00000549505 NKX1-2Q9UD57 310 aaPredicted RBP9.92□□□□□ -0.82
RAB5B-206ENST00000549505 FKBPLQ9UIM3 349 aa9.92□□□□□ -0.82
RAB5B-206ENST00000549505 TRAF6Q9Y4K3 522 aa9.92□□□□□ -0.82
RAB5B-206ENST00000549505 ATG2AQ2TAZ0 1938 aa9.92□□□□□ -0.82
RAB5B-206ENST00000549505 COL4A3Q01955 1670 aa9.92□□□□□ -0.82
RAB5B-206ENST00000549505 DENND4AQ7Z401 1863 aa9.92□□□□□ -0.82
RAB5B-206ENST00000549505 GRXCR2A6NFK2 248 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 DIAPH2O60879 1101 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 NDUFS3O75489 264 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 ARHGEF15O94989 841 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 PCSK2P16519 638 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 ERVFC1P60507 584 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 CYP4F8P98187 520 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 PTPRCAPQ14761 206 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 MYLK3Q32MK0 819 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 KHDC1Q4VXA5 237 aaKnown RBP9.91□□□□□ -0.82
RAB5B-206ENST00000549505 XKR7Q5GH72 579 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 CFAP157Q5JU67 520 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 DGKKQ5KSL6 1271 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 TMCO2Q7Z6W1 182 aaPredicted RBP9.91□□□□□ -0.82
RAB5B-206ENST00000549505 KLHDC8AQ8IYD2 350 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 PGAM4Q8N0Y7 254 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 ZNF513Q8N8E2 541 aaPredicted RBP9.91□□□□□ -0.82
RAB5B-206ENST00000549505 HMGCLL1Q8TB92 370 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 RMDN1Q96DB5 314 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 TNFRSF12AQ9NP84 129 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 DKK3Q9UBP4 350 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 MCM8Q9UJA3 840 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 PKP3Q9Y446 797 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 SERTM1A2A2V5 107 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 STX7O15400 261 aaKnown RBP9.91□□□□□ -0.82
RAB5B-206ENST00000549505 CYBBP04839 570 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 ACRV1P26436 265 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 CD70P32970 193 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 CDKL1Q00532 357 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 BCL2L1Q07817 233 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 PPP1R3AQ16821 1122 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 FUT11Q495W5 492 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 PLPP4Q5VZY2 271 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 PAQR3Q6TCH7 311 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 C16orf89Q6UX73 402 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 FBXW8Q8N3Y1 598 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 WDR60Q8WVS4 1066 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 MCUR1Q96AQ8 359 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 LRIG1Q96JA1 1093 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 PANX3Q96QZ0 392 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 HTATIP2Q9BUP3 242 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 ALG9Q9H6U8 611 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 IRAK4Q9NWZ3 460 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 DPP7Q9UHL4 492 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 IKZF3Q9UKT9 509 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 FCF1Q9Y324 198 aaKnown RBP9.91□□□□□ -0.82
RAB5B-206ENST00000549505 COPG1Q9Y678 874 aaKnown RBP9.91□□□□□ -0.82
RAB5B-206ENST00000549505 NPIPB8E9PQR5 432 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 SMAD6O43541 496 aaKnown RBP9.91□□□□□ -0.82
RAB5B-206ENST00000549505 CLASP2O75122 1294 aaKnown RBP9.91□□□□□ -0.82
RAB5B-206ENST00000549505 SRP72O76094 671 aaKnown RBP9.91□□□□□ -0.82
RAB5B-206ENST00000549505 CDK14O94921 469 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 MLYCDO95822 493 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 MT-CO1P00395 513 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 SNRPD1P62314 119 aaKnown RBP9.91□□□□□ -0.82
RAB5B-206ENST00000549505 LCP2Q13094 533 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 PDAP1Q13442 181 aaKnown RBP9.91□□□□□ -0.82
RAB5B-206ENST00000549505 CAMK1Q14012 370 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 MAPRE2Q15555 327 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 PPM1LQ5SGD2 360 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 C22orf39Q6P5X5 142 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 TPRG1Q6ZUI0 275 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 RAB44Q7Z6P3 723 aaPredicted RBP9.91□□□□□ -0.82
RAB5B-206ENST00000549505 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.91□□□□□ -0.82
RAB5B-206ENST00000549505 MAB21L3Q8N8X9 362 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 RIN3Q8TB24 985 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 SLC52A3Q9NQ40 469 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 TLR9Q9NR96 1032 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 CLEC4EQ9ULY5 219 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 SLC27A6Q9Y2P4 619 aa9.91□□□□□ -0.82
RAB5B-206ENST00000549505 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.9□□□□□ -0.82
RAB5B-206ENST00000549505 BBIP1A8MTZ0 92 aa9.9□□□□□ -0.82
RAB5B-206ENST00000549505 PRMT5O14744 637 aaPredicted RBP9.9□□□□□ -0.82
RAB5B-206ENST00000549505 HOXC11O43248 304 aaPredicted RBP9.9□□□□□ -0.82
RAB5B-206ENST00000549505 ANP32DO95626 131 aa9.9□□□□□ -0.82
RAB5B-206ENST00000549505 POP4O95707 220 aaKnown RBP9.9□□□□□ -0.82
RAB5B-206ENST00000549505 JUNP05412 331 aaKnown RBP9.9□□□□□ -0.82
RAB5B-206ENST00000549505 SRPRAP08240 638 aaKnown RBP9.9□□□□□ -0.82
RAB5B-206ENST00000549505 EZRP15311 586 aaKnown RBP9.9□□□□□ -0.82
RAB5B-206ENST00000549505 PMLP29590 882 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms