RNA–Protein interactions for RNA: ENST00000549455.1

ATXN2-218, Transcript of ataxin 2, humanhuman

TSL 4

Gene ATXN2, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-218ENST00000549455 TUBD1Q9UJT1 453 aa14.39□□□□□ -0.11
ATXN2-218ENST00000549455 CHKBQ9Y259 395 aa14.39□□□□□ -0.11
ATXN2-218ENST00000549455 OAS3Q9Y6K5 1087 aaKnown RBP14.39□□□□□ -0.11
ATXN2-218ENST00000549455 DNAJC6O75061 913 aa14.38□□□□□ -0.11
ATXN2-218ENST00000549455 CLDN7O95471 211 aa14.38□□□□□ -0.11
ATXN2-218ENST00000549455 MAP4P27816 1152 aaKnown RBP14.38□□□□□ -0.11
ATXN2-218ENST00000549455 GJC1P36383 396 aa14.38□□□□□ -0.11
ATXN2-218ENST00000549455 MC2RQ01718 297 aa14.38□□□□□ -0.11
ATXN2-218ENST00000549455 SLC25A11Q02978 314 aaKnown RBP14.38□□□□□ -0.11
ATXN2-218ENST00000549455 SRSF1Q07955 248 aaKnown RBP eCLIP14.38□□□□□ -0.116e-6■■□□□ 12.1
ATXN2-218ENST00000549455 MMRN1Q13201 1228 aa14.38□□□□□ -0.11
ATXN2-218ENST00000549455 PIGHQ14442 188 aaPredicted RBP14.38□□□□□ -0.11
ATXN2-218ENST00000549455 FILIP1LQ4L180 1135 aa14.38□□□□□ -0.11
ATXN2-218ENST00000549455 WDR74Q6RFH5 385 aaPredicted RBP14.38□□□□□ -0.11
ATXN2-218ENST00000549455 CLEC17AQ6ZS10 378 aa14.38□□□□□ -0.11
ATXN2-218ENST00000549455 SLC9B2Q86UD5 537 aa14.38□□□□□ -0.11
ATXN2-218ENST00000549455 NLRP8Q86W28 1048 aa14.38□□□□□ -0.11
ATXN2-218ENST00000549455 C9orf43Q8TAL5 461 aaPredicted RBP14.38□□□□□ -0.11
ATXN2-218ENST00000549455 RNF31Q96EP0 1072 aa14.38□□□□□ -0.11
ATXN2-218ENST00000549455 ISCUQ9H1K1 167 aa14.38□□□□□ -0.11
ATXN2-218ENST00000549455 SARS2Q9NP81 518 aaKnown RBP14.38□□□□□ -0.11
ATXN2-218ENST00000549455 VPS18Q9P253 973 aa14.38□□□□□ -0.11
ATXN2-218ENST00000549455 PDP2Q9P2J9 529 aa14.38□□□□□ -0.11
ATXN2-218ENST00000549455 TBC1D29Q9UFV1 150 aa14.38□□□□□ -0.11
ATXN2-218ENST00000549455 ANAPC7Q9UJX3 599 aa14.38□□□□□ -0.11
ATXN2-218ENST00000549455 DNPEPQ9ULA0 475 aa14.38□□□□□ -0.11
ATXN2-218ENST00000549455 NBASA2RRP1 2371 aa14.37□□□□□ -0.11
ATXN2-218ENST00000549455 C1orf232A0A0U1RR37 186 aa14.37□□□□□ -0.11
ATXN2-218ENST00000549455 STK17BO94768 372 aa14.37□□□□□ -0.11
ATXN2-218ENST00000549455 CD48P09326 243 aa14.37□□□□□ -0.11
ATXN2-218ENST00000549455 SLC2A4P14672 509 aa14.37□□□□□ -0.11
ATXN2-218ENST00000549455 CA4P22748 312 aa14.37□□□□□ -0.11
ATXN2-218ENST00000549455 OAS2P29728 719 aaKnown RBP14.37□□□□□ -0.11
ATXN2-218ENST00000549455 GARSP41250 739 aaKnown RBP14.37□□□□□ -0.11
ATXN2-218ENST00000549455 NOP2P46087 812 aaKnown RBP14.37□□□□□ -0.11
ATXN2-218ENST00000549455 ZNF165P49910 485 aa14.37□□□□□ -0.11
ATXN2-218ENST00000549455 TYRO3Q06418 890 aa14.37□□□□□ -0.11
ATXN2-218ENST00000549455 GALNT2Q10471 571 aa14.37□□□□□ -0.11
ATXN2-218ENST00000549455 IHHQ14623 411 aa14.37□□□□□ -0.11
ATXN2-218ENST00000549455 DEFB109BQ30KR1 87 aa14.37□□□□□ -0.11
ATXN2-218ENST00000549455 TDRD12Q587J7 1177 aaKnown RBP14.37□□□□□ -0.11
ATXN2-218ENST00000549455 CCDC122Q5T0U0 273 aa14.37□□□□□ -0.11
ATXN2-218ENST00000549455 ATP1A1-AS1Q5TC04 95 aa14.37□□□□□ -0.11
ATXN2-218ENST00000549455 TIGD7Q6NT04 549 aaPredicted RBP14.37□□□□□ -0.11
ATXN2-218ENST00000549455 C16orf46Q6P387 395 aa14.37□□□□□ -0.11
ATXN2-218ENST00000549455 TIPARPQ7Z3E1 657 aaKnown RBP14.37□□□□□ -0.11
ATXN2-218ENST00000549455 ARHGAP22Q7Z5H3 698 aa14.37□□□□□ -0.11
ATXN2-218ENST00000549455 LRRN4Q8WUT4 740 aa14.37□□□□□ -0.11
ATXN2-218ENST00000549455 SH3KBP1Q96B97 665 aa14.37□□□□□ -0.11
ATXN2-218ENST00000549455 ZPBPQ9BS86 351 aa14.37□□□□□ -0.11
ATXN2-218ENST00000549455 HERPUD2Q9BSE4 406 aa14.37□□□□□ -0.11
ATXN2-218ENST00000549455 EFHD1Q9BUP0 239 aa14.37□□□□□ -0.11
ATXN2-218ENST00000549455 TBC1D10AQ9BXI6 508 aa14.37□□□□□ -0.11
ATXN2-218ENST00000549455 PCDH9Q9HC56 1237 aa14.37□□□□□ -0.11
ATXN2-218ENST00000549455 RBM22Q9NW64 420 aaKnown RBP eCLIP14.37□□□□□ -0.11
ATXN2-218ENST00000549455 IP6K2Q9UHH9 426 aa14.37□□□□□ -0.11
ATXN2-218ENST00000549455 COL12A1Q99715 3063 aa14.36□□□□□ -0.11
ATXN2-218ENST00000549455 FADS2P1A8MWK0 482 aa14.36□□□□□ -0.11
ATXN2-218ENST00000549455 HLA-DQB2P05538 268 aa14.36□□□□□ -0.11
ATXN2-218ENST00000549455 F3P13726 295 aa14.36□□□□□ -0.11
ATXN2-218ENST00000549455 CASRP41180 1078 aa14.36□□□□□ -0.11
ATXN2-218ENST00000549455 EPHA4P54764 986 aa14.36□□□□□ -0.11
ATXN2-218ENST00000549455 ABHD18Q0P651 414 aa14.36□□□□□ -0.11
ATXN2-218ENST00000549455 IGFBP7Q16270 282 aa14.36□□□□□ -0.11
ATXN2-218ENST00000549455 ANO6Q4KMQ2 910 aa14.36□□□□□ -0.11
ATXN2-218ENST00000549455 NCBP2-AS2Q69YL0 99 aa14.36□□□□□ -0.11
ATXN2-218ENST00000549455 IYDQ6PHW0 289 aa14.36□□□□□ -0.11
ATXN2-218ENST00000549455 LYSMD3Q7Z3D4 306 aa14.36□□□□□ -0.11
ATXN2-218ENST00000549455 LRRC49Q8IUZ0 686 aa14.36□□□□□ -0.11
ATXN2-218ENST00000549455 STARD8Q92502 1023 aa14.36□□□□□ -0.11
ATXN2-218ENST00000549455 GBP4Q96PP9 640 aa14.36□□□□□ -0.11
ATXN2-218ENST00000549455 NUP85Q9BW27 656 aa14.36□□□□□ -0.11
ATXN2-218ENST00000549455 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.36□□□□□ -0.11
ATXN2-218ENST00000549455 SPRY4Q9C004 299 aa14.36□□□□□ -0.11
ATXN2-218ENST00000549455 NAT10Q9H0A0 1025 aaKnown RBP14.36□□□□□ -0.11
ATXN2-218ENST00000549455 THAP2Q9H0W7 228 aa14.36□□□□□ -0.11
ATXN2-218ENST00000549455 ARFGAP3Q9NP61 516 aa14.36□□□□□ -0.11
ATXN2-218ENST00000549455 FBXO8Q9NRD0 319 aa14.36□□□□□ -0.11
ATXN2-218ENST00000549455 HAUS2Q9NVX0 235 aa14.36□□□□□ -0.11
ATXN2-218ENST00000549455 PKD2L2Q9NZM6 624 aa14.36□□□□□ -0.11
ATXN2-218ENST00000549455 RCOR3Q9P2K3 495 aaPredicted RBP14.36□□□□□ -0.11
ATXN2-218ENST00000549455 ANKMY1Q9P2S6 941 aa14.36□□□□□ -0.11
ATXN2-218ENST00000549455 ANAPC2Q9UJX6 822 aa14.36□□□□□ -0.11
ATXN2-218ENST00000549455 CNOT6Q9ULM6 557 aaKnown RBP14.36□□□□□ -0.11
ATXN2-218ENST00000549455 TMEM184BQ9Y519 407 aaPredicted RBP14.36□□□□□ -0.11
ATXN2-218ENST00000549455 LRRK2Q5S007 2527 aa14.35□□□□□ -0.11
ATXN2-218ENST00000549455 POLR1CO15160 346 aaPredicted RBP14.35□□□□□ -0.11
ATXN2-218ENST00000549455 MATN3O15232 486 aa14.35□□□□□ -0.11
ATXN2-218ENST00000549455 PRLP01236 227 aa14.35□□□□□ -0.11
ATXN2-218ENST00000549455 TCN2P20062 427 aa14.35□□□□□ -0.11
ATXN2-218ENST00000549455 CES1P23141 567 aa14.35□□□□□ -0.11
ATXN2-218ENST00000549455 IL4RP24394 825 aa14.35□□□□□ -0.11
ATXN2-218ENST00000549455 SPINT3P49223 89 aa14.35□□□□□ -0.11
ATXN2-218ENST00000549455 FOXK1P85037 733 aa14.35□□□□□ -0.11
ATXN2-218ENST00000549455 MC1RQ01726 317 aa14.35□□□□□ -0.11
ATXN2-218ENST00000549455 FOXM1Q08050 763 aa14.35□□□□□ -0.11
ATXN2-218ENST00000549455 NIPAL4Q0D2K0 466 aa14.35□□□□□ -0.11
ATXN2-218ENST00000549455 IFI16Q16666 785 aaKnown RBP14.35□□□□□ -0.11
ATXN2-218ENST00000549455 CCDC183Q5T5S1 534 aa14.35□□□□□ -0.11
ATXN2-218ENST00000549455 ALG1LQ6GMV1 187 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms