RNA–Protein interactions for RNA: ENST00000549414.6

CUX1-213, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-213ENST00000549414 GSNP06396 782 aa16.21■□□□□ 0.19
CUX1-213ENST00000549414 HCAR3P49019 387 aa16.21■□□□□ 0.19
CUX1-213ENST00000549414 ILF2Q12905 390 aaKnown RBP16.21■□□□□ 0.19
CUX1-213ENST00000549414 SIRPB2Q5JXA9 342 aa16.21■□□□□ 0.19
CUX1-213ENST00000549414 OOSP2Q86WS3 158 aa16.21■□□□□ 0.19
CUX1-213ENST00000549414 RASAL3Q86YV0 1011 aa16.21■□□□□ 0.19
CUX1-213ENST00000549414 PPP3R2Q96LZ3 170 aa16.21■□□□□ 0.19
CUX1-213ENST00000549414 ZCCHC2Q9C0B9 1178 aaKnown RBP16.21■□□□□ 0.19
CUX1-213ENST00000549414 E7ESA3 106 aa16.21■□□□□ 0.19
CUX1-213ENST00000549414 HPCAP84074 193 aa16.21■□□□□ 0.19
CUX1-213ENST00000549414 CNTN1Q12860 1018 aa16.21■□□□□ 0.19
CUX1-213ENST00000549414 CHPFQ8IZ52 775 aa16.21■□□□□ 0.19
CUX1-213ENST00000549414 EID3Q8N140 333 aa16.21■□□□□ 0.19
CUX1-213ENST00000549414 UBR7Q8N806 425 aa16.21■□□□□ 0.19
CUX1-213ENST00000549414 ZNF614Q8N883 585 aa16.21■□□□□ 0.19
CUX1-213ENST00000549414 PTCD3Q96EY7 689 aaKnown RBP16.21■□□□□ 0.19
CUX1-213ENST00000549414 PLEKHA8Q96JA3 519 aa16.21■□□□□ 0.19
CUX1-213ENST00000549414 SMOC2Q9H3U7 446 aa16.21■□□□□ 0.19
CUX1-213ENST00000549414 TBC1D23Q9NUY8 699 aa16.21■□□□□ 0.19
CUX1-213ENST00000549414 OXSMQ9NWU1 459 aa16.21■□□□□ 0.19
CUX1-213ENST00000549414 KIAA1522Q9P206 1035 aaPredicted RBP16.21■□□□□ 0.19
CUX1-213ENST00000549414 ENPP3O14638 875 aa16.21■□□□□ 0.18
CUX1-213ENST00000549414 ALDOAP04075 364 aaKnown RBP16.21■□□□□ 0.18
CUX1-213ENST00000549414 UPP1Q16831 310 aa16.21■□□□□ 0.18
CUX1-213ENST00000549414 XKR6Q5GH73 641 aa16.21■□□□□ 0.18
CUX1-213ENST00000549414 RGL4Q8IZJ4 473 aa16.21■□□□□ 0.18
CUX1-213ENST00000549414 PNPLA1Q8N8W4 532 aa16.21■□□□□ 0.18
CUX1-213ENST00000549414 UGT2B28Q9BY64 529 aa16.21■□□□□ 0.18
CUX1-213ENST00000549414 STX16-NPEPL1H3BU86 382 aa16.2■□□□□ 0.18
CUX1-213ENST00000549414 PPM1AP35813 382 aa16.2■□□□□ 0.18
CUX1-213ENST00000549414 SERPINB10P48595 397 aa16.2■□□□□ 0.18
CUX1-213ENST00000549414 TXNDC8Q6A555 127 aa16.2■□□□□ 0.18
CUX1-213ENST00000549414 TMEM26Q6ZUK4 368 aa16.2■□□□□ 0.18
CUX1-213ENST00000549414 UBE2R2Q712K3 238 aaPredicted RBP16.2■□□□□ 0.18
CUX1-213ENST00000549414 IFNLR1Q8IU57 520 aaPredicted RBP16.2■□□□□ 0.18
CUX1-213ENST00000549414 TRAPPC9Q96Q05 1148 aa16.2■□□□□ 0.18
CUX1-213ENST00000549414 SMAD5Q99717 465 aaKnown RBP16.2■□□□□ 0.18
CUX1-213ENST00000549414 CXCL16Q9H2A7 254 aa16.2■□□□□ 0.18
CUX1-213ENST00000549414 IPPKQ9H8X2 491 aa16.2■□□□□ 0.18
CUX1-213ENST00000549414 GIMAP4Q9NUV9 329 aa16.2■□□□□ 0.18
CUX1-213ENST00000549414 POLR3BQ9NW08 1133 aaPredicted RBP16.2■□□□□ 0.18
CUX1-213ENST00000549414 DDX60LQ5H9U9 1706 aaKnown RBP16.2■□□□□ 0.18
CUX1-213ENST00000549414 ZNF865P0CJ78 1059 aaPredicted RBP16.2■□□□□ 0.18
CUX1-213ENST00000549414 HSMCR30P0CW71 290 aa16.2■□□□□ 0.18
CUX1-213ENST00000549414 TXNDC11Q6PKC3 985 aa16.2■□□□□ 0.18
CUX1-213ENST00000549414 MAGEB10Q96LZ2 347 aaPredicted RBP16.2■□□□□ 0.18
CUX1-213ENST00000549414 CCDC28BQ9BUN5 200 aa16.2■□□□□ 0.18
CUX1-213ENST00000549414 SNX6Q9UNH7 406 aa16.2■□□□□ 0.18
CUX1-213ENST00000549414 COL4A1P02462 1669 aa16.2■□□□□ 0.18
CUX1-213ENST00000549414 OR2AG2A6NM03 316 aa16.2■□□□□ 0.18
CUX1-213ENST00000549414 UGT1A6P19224 532 aa16.2■□□□□ 0.18
CUX1-213ENST00000549414 UGT1A1P22309 533 aa16.2■□□□□ 0.18
CUX1-213ENST00000549414 UGT1A4P22310 534 aa16.2■□□□□ 0.18
CUX1-213ENST00000549414 PSMB9P28065 219 aa16.2■□□□□ 0.18
CUX1-213ENST00000549414 UGT1A3P35503 534 aa16.2■□□□□ 0.18
CUX1-213ENST00000549414 UGT1A5P35504 534 aa16.2■□□□□ 0.18
CUX1-213ENST00000549414 SLC11A1P49279 550 aa16.2■□□□□ 0.18
CUX1-213ENST00000549414 HK2P52789 917 aa16.2■□□□□ 0.18
CUX1-213ENST00000549414 NPWQ8N729 165 aa16.2■□□□□ 0.18
CUX1-213ENST00000549414 NAT14Q8WUY8 206 aa16.2■□□□□ 0.18
CUX1-213ENST00000549414 ING5Q8WYH8 240 aa16.2■□□□□ 0.18
CUX1-213ENST00000549414 OR52E6Q96RD3 313 aa16.2■□□□□ 0.18
CUX1-213ENST00000549414 RHBDL2Q9NX52 303 aa16.2■□□□□ 0.18
CUX1-213ENST00000549414 C6orf203Q9P0P8 240 aaPredicted RBP16.2■□□□□ 0.18
CUX1-213ENST00000549414 ZDHHC2Q9UIJ5 367 aa16.2■□□□□ 0.18
CUX1-213ENST00000549414 U3KQV3 271 aa16.2■□□□□ 0.18
CUX1-213ENST00000549414 GPR1P46091 355 aa16.19■□□□□ 0.18
CUX1-213ENST00000549414 ALDH6A1Q02252 535 aaKnown RBP16.19■□□□□ 0.18
CUX1-213ENST00000549414 LCP2Q13094 533 aa16.19■□□□□ 0.18
CUX1-213ENST00000549414 PCLAFQ15004 111 aa16.19■□□□□ 0.18
CUX1-213ENST00000549414 APOLD1Q96LR9 279 aa16.19■□□□□ 0.18
CUX1-213ENST00000549414 PCDHAC1Q9H158 963 aa16.19■□□□□ 0.18
CUX1-213ENST00000549414 BRD9Q9H8M2 597 aa16.19■□□□□ 0.18
CUX1-213ENST00000549414 PNPLA8Q9NP80 782 aa16.19■□□□□ 0.18
CUX1-213ENST00000549414 ADRM1Q16186 407 aa16.19■□□□□ 0.18
CUX1-213ENST00000549414 ZC3H12BQ5HYM0 836 aaKnown RBP16.19■□□□□ 0.18
CUX1-213ENST00000549414 MS4A13Q5J8X5 152 aa16.19■□□□□ 0.18
CUX1-213ENST00000549414 RNF220Q5VTB9 566 aa16.19■□□□□ 0.18
CUX1-213ENST00000549414 MSANTD2Q6P1R3 559 aa16.19■□□□□ 0.18
CUX1-213ENST00000549414 CRTC3Q6UUV7 619 aa16.19■□□□□ 0.18
CUX1-213ENST00000549414 SERPINA9Q86WD7 417 aa16.19■□□□□ 0.18
CUX1-213ENST00000549414 C2orf73Q8N5S3 287 aaPredicted RBP16.19■□□□□ 0.18
CUX1-213ENST00000549414 B4GALNT2Q8NHY0 566 aa16.19■□□□□ 0.18
CUX1-213ENST00000549414 GLMNQ92990 594 aa16.19■□□□□ 0.18
CUX1-213ENST00000549414 DGCR6LQ9BY27 220 aa16.19■□□□□ 0.18
CUX1-213ENST00000549414 SOCS7O14512 581 aa16.19■□□□□ 0.18
CUX1-213ENST00000549414 CHRNA1P02708 482 aa16.19■□□□□ 0.18
CUX1-213ENST00000549414 DLDP09622 509 aaKnown RBP16.19■□□□□ 0.18
CUX1-213ENST00000549414 ALPIP09923 528 aa16.19■□□□□ 0.18
CUX1-213ENST00000549414 CES1P23141 567 aa16.19■□□□□ 0.18
CUX1-213ENST00000549414 WASP42768 502 aa16.19■□□□□ 0.18
CUX1-213ENST00000549414 IL23RQ5VWK5 629 aa16.19■□□□□ 0.18
CUX1-213ENST00000549414 FRMD7Q6ZUT3 714 aa16.19■□□□□ 0.18
CUX1-213ENST00000549414 SERINC5Q86VE9 423 aa16.19■□□□□ 0.18
CUX1-213ENST00000549414 PGAM4Q8N0Y7 254 aa16.19■□□□□ 0.18
CUX1-213ENST00000549414 ARNTL2Q8WYA1 636 aa16.19■□□□□ 0.18
CUX1-213ENST00000549414 PRR11Q96HE9 360 aaPredicted RBP16.19■□□□□ 0.18
CUX1-213ENST00000549414 CDKN2AIPNLQ96HQ2 116 aa16.19■□□□□ 0.18
CUX1-213ENST00000549414 ALDH1A2O94788 518 aa16.19■□□□□ 0.18
CUX1-213ENST00000549414 EPN2O95208 641 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms