RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 TSPAN12O95859 305 aa20.8■□□□□ 0.92
RITA1-201ENST00000548278 ESR1P03372 595 aa20.8■□□□□ 0.92
RITA1-201ENST00000548278 ECT2LQ008S8 904 aa20.8■□□□□ 0.92
RITA1-201ENST00000548278 ELMSAN1Q6PJG2 1045 aa20.8■□□□□ 0.92
RITA1-201ENST00000548278 ACAD11Q709F0 780 aa20.8■□□□□ 0.92
RITA1-201ENST00000548278 NKAPQ8N5F7 415 aaKnown RBP20.8■□□□□ 0.92
RITA1-201ENST00000548278 PCDH20Q8N6Y1 951 aaKnown RBP20.8■□□□□ 0.92
RITA1-201ENST00000548278 PTGR2Q8N8N7 351 aaPredicted RBP20.8■□□□□ 0.92
RITA1-201ENST00000548278 SIDT2Q8NBJ9 832 aaKnown RBP20.8■□□□□ 0.92
RITA1-201ENST00000548278 GIMAP7Q8NHV1 300 aa20.8■□□□□ 0.92
RITA1-201ENST00000548278 STAG3L4Q8TBR4 150 aa20.8■□□□□ 0.92
RITA1-201ENST00000548278 CD200R1Q8TD46 325 aa20.8■□□□□ 0.92
RITA1-201ENST00000548278 ING5Q8WYH8 240 aa20.8■□□□□ 0.92
RITA1-201ENST00000548278 EXT2Q93063 718 aa20.8■□□□□ 0.92
RITA1-201ENST00000548278 MCUR1Q96AQ8 359 aa20.8■□□□□ 0.92
RITA1-201ENST00000548278 CPEB1Q9BZB8 566 aaKnown RBP20.8■□□□□ 0.92
RITA1-201ENST00000548278 DENND2DQ9H6A0 471 aaPredicted RBP20.8■□□□□ 0.92
RITA1-201ENST00000548278 IL26Q9NPH9 171 aa20.8■□□□□ 0.92
RITA1-201ENST00000548278 ZMYM5Q9UJ78 669 aa20.8■□□□□ 0.92
RITA1-201ENST00000548278 WNT6Q9Y6F9 365 aa20.8■□□□□ 0.92
RITA1-201ENST00000548278 UBFD1O14562 309 aaKnown RBP20.79■□□□□ 0.92
RITA1-201ENST00000548278 PRAMEF1O95521 474 aa20.79■□□□□ 0.92
RITA1-201ENST00000548278 POU2F2P09086 479 aa20.79■□□□□ 0.92
RITA1-201ENST00000548278 CPOXP36551 454 aa20.79■□□□□ 0.92
RITA1-201ENST00000548278 DMC1Q14565 340 aa20.79■□□□□ 0.92
RITA1-201ENST00000548278 NAA25Q14CX7 972 aa20.79■□□□□ 0.92
RITA1-201ENST00000548278 CARD16Q5EG05 197 aa20.79■□□□□ 0.92
RITA1-201ENST00000548278 WASHC2DQ5SRD0 308 aa20.79■□□□□ 0.92
RITA1-201ENST00000548278 CERS6Q6ZMG9 384 aa20.79■□□□□ 0.92
RITA1-201ENST00000548278 POU5F2Q8N7G0 328 aa20.79■□□□□ 0.92
RITA1-201ENST00000548278 ZNF557Q8N988 423 aaPredicted RBP20.79■□□□□ 0.92
RITA1-201ENST00000548278 AGAP11Q8TF27 550 aa20.79■□□□□ 0.92
RITA1-201ENST00000548278 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.79■□□□□ 0.92
RITA1-201ENST00000548278 MAELQ96JY0 434 aaKnown RBP20.79■□□□□ 0.92
RITA1-201ENST00000548278 FAR2Q96K12 515 aa20.79■□□□□ 0.92
RITA1-201ENST00000548278 MCOLN1Q9GZU1 580 aa20.79■□□□□ 0.92
RITA1-201ENST00000548278 SUV39H2Q9H5I1 410 aa20.79■□□□□ 0.92
RITA1-201ENST00000548278 MARK1Q9P0L2 795 aa20.79■□□□□ 0.92
RITA1-201ENST00000548278 TRMT6Q9UJA5 497 aaKnown RBP20.79■□□□□ 0.92
RITA1-201ENST00000548278 TRPC5OSA6NMA1 111 aa20.79■□□□□ 0.92
RITA1-201ENST00000548278 BPIP17213 487 aa20.79■□□□□ 0.92
RITA1-201ENST00000548278 GM2AP17900 193 aa20.79■□□□□ 0.92
RITA1-201ENST00000548278 CA5AP35218 305 aa20.79■□□□□ 0.92
RITA1-201ENST00000548278 CCNHP51946 323 aaPredicted RBP20.79■□□□□ 0.92
RITA1-201ENST00000548278 KLF10Q13118 480 aa20.79■□□□□ 0.92
RITA1-201ENST00000548278 CBX2Q14781 532 aaPredicted RBP20.79■□□□□ 0.92
RITA1-201ENST00000548278 ACCSLQ4AC99 568 aa20.79■□□□□ 0.92
RITA1-201ENST00000548278 FAM109BQ6ICB4 259 aaPredicted RBP20.79■□□□□ 0.92
RITA1-201ENST00000548278 DPY19L3Q6ZPD9 716 aa20.79■□□□□ 0.92
RITA1-201ENST00000548278 SUGP1Q8IWZ8 645 aaKnown RBP20.79■□□□□ 0.92
RITA1-201ENST00000548278 OTUB2Q96DC9 234 aa20.79■□□□□ 0.92
RITA1-201ENST00000548278 CMTM5Q96DZ9 223 aa20.79■□□□□ 0.92
RITA1-201ENST00000548278 CD248Q9HCU0 757 aa20.79■□□□□ 0.92
RITA1-201ENST00000548278 PPIL1Q9Y3C6 166 aa20.79■□□□□ 0.92
RITA1-201ENST00000548278 CHD9Q3L8U1 2897 aa20.78■□□□□ 0.92
RITA1-201ENST00000548278 NPIPB15A6NHN6 443 aaPredicted RBP20.78■□□□□ 0.92
RITA1-201ENST00000548278 SDHDO14521 159 aa20.78■□□□□ 0.92
RITA1-201ENST00000548278 ZNF197O14709 1029 aa20.78■□□□□ 0.92
RITA1-201ENST00000548278 PRMT5O14744 637 aaPredicted RBP20.78■□□□□ 0.92
RITA1-201ENST00000548278 BNIP3LO60238 219 aa20.78■□□□□ 0.92
RITA1-201ENST00000548278 SUPT7LO94864 414 aa20.78■□□□□ 0.92
RITA1-201ENST00000548278 POP4O95707 220 aaKnown RBP20.78■□□□□ 0.92
RITA1-201ENST00000548278 PRDX6P30041 224 aa20.78■□□□□ 0.92
RITA1-201ENST00000548278 PGM1P36871 562 aa20.78■□□□□ 0.92
RITA1-201ENST00000548278 MNAT1P51948 309 aa20.78■□□□□ 0.92
RITA1-201ENST00000548278 PFKFB4Q16877 469 aa20.78■□□□□ 0.92
RITA1-201ENST00000548278 DNAL1Q4LDG9 190 aa20.78■□□□□ 0.92
RITA1-201ENST00000548278 PDE12Q6L8Q7 609 aaKnown RBP20.78■□□□□ 0.92
RITA1-201ENST00000548278 SNX20Q7Z614 316 aa20.78■□□□□ 0.92
RITA1-201ENST00000548278 KIAA0907Q7Z7F0 614 aaPredicted RBP20.78■□□□□ 0.92
RITA1-201ENST00000548278 TSPAN33Q86UF1 283 aa20.78■□□□□ 0.92
RITA1-201ENST00000548278 SERPINA9Q86WD7 417 aa20.78■□□□□ 0.92
RITA1-201ENST00000548278 CCDC97Q96F63 343 aaPredicted RBP20.78■□□□□ 0.92
RITA1-201ENST00000548278 SCRN2Q96FV2 425 aa20.78■□□□□ 0.92
RITA1-201ENST00000548278 ZNF385DQ9H6B1 395 aa20.78■□□□□ 0.92
RITA1-201ENST00000548278 APPL1Q9UKG1 709 aa20.78■□□□□ 0.92
RITA1-201ENST00000548278 CDC7O00311 574 aa20.77■□□□□ 0.92
RITA1-201ENST00000548278 CHUKO15111 745 aa20.77■□□□□ 0.92
RITA1-201ENST00000548278 MAGEC1O60732 1142 aa20.77■□□□□ 0.92
RITA1-201ENST00000548278 CA3P07451 260 aa20.77■□□□□ 0.92
RITA1-201ENST00000548278 CHRM3P20309 590 aa20.77■□□□□ 0.92
RITA1-201ENST00000548278 CLCN7P51798 805 aa20.77■□□□□ 0.92
RITA1-201ENST00000548278 COPAP53621 1224 aa20.77■□□□□ 0.92
RITA1-201ENST00000548278 NFATC2Q13469 925 aa20.77■□□□□ 0.92
RITA1-201ENST00000548278 TSNQ15631 228 aaKnown RBP20.77■□□□□ 0.92
RITA1-201ENST00000548278 TMEM215Q68D42 235 aa20.77■□□□□ 0.92
RITA1-201ENST00000548278 CRTC1Q6UUV9 634 aa20.77■□□□□ 0.92
RITA1-201ENST00000548278 RBM23Q86U06 439 aaKnown RBP20.77■□□□□ 0.92
RITA1-201ENST00000548278 CBARPQ8N350 705 aaPredicted RBP20.77■□□□□ 0.92
RITA1-201ENST00000548278 CPSF7Q8N684 471 aaKnown RBP20.77■□□□□ 0.92
RITA1-201ENST00000548278 ITFG1Q8TB96 612 aa20.77■□□□□ 0.92
RITA1-201ENST00000548278 FUBP1Q96AE4 644 aaKnown RBP20.77■□□□□ 0.92
RITA1-201ENST00000548278 ASB8Q9H765 288 aa20.77■□□□□ 0.92
RITA1-201ENST00000548278 RNF112Q9ULX5 631 aa20.77■□□□□ 0.92
RITA1-201ENST00000548278 MRPS23Q9Y3D9 190 aaKnown RBP20.77■□□□□ 0.92
RITA1-201ENST00000548278 PCDHB1Q9Y5F3 818 aa20.77■□□□□ 0.92
RITA1-201ENST00000548278 LAMA3Q16787 3333 aa20.77■□□□□ 0.92
RITA1-201ENST00000548278 TRBV5-4A0A0C4DH59 114 aa20.77■□□□□ 0.92
RITA1-201ENST00000548278 IQCF5A8MTL0 148 aa20.77■□□□□ 0.92
RITA1-201ENST00000548278 A8MX80 341 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms