RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 SLC17A9Q9BYT1 436 aa17.34■□□□□ 0.37
HDAC7-227ENST00000548080 CAPN10Q9HC96 672 aa17.34■□□□□ 0.37
HDAC7-227ENST00000548080 PPANQ9NQ55 473 aaKnown RBP17.34■□□□□ 0.37
HDAC7-227ENST00000548080 SMYD2Q9NRG4 433 aa17.34■□□□□ 0.37
HDAC7-227ENST00000548080 EURLQ9NYK6 297 aa17.34■□□□□ 0.37
HDAC7-227ENST00000548080 PSMC3IPQ9P2W1 217 aaPredicted RBP17.34■□□□□ 0.37
HDAC7-227ENST00000548080 SUSD2Q9UGT4 822 aa17.34■□□□□ 0.37
HDAC7-227ENST00000548080 SLC6A14Q9UN76 642 aa17.34■□□□□ 0.37
HDAC7-227ENST00000548080 NOVA2Q9UNW9 492 aaKnown RBP17.34■□□□□ 0.37
HDAC7-227ENST00000548080 CXorf49A8MYA2 514 aaPredicted RBP17.33■□□□□ 0.37
HDAC7-227ENST00000548080 FZD6O60353 706 aa17.33■□□□□ 0.37
HDAC7-227ENST00000548080 PIAS1O75925 651 aa17.33■□□□□ 0.37
HDAC7-227ENST00000548080 ENGP17813 658 aa17.33■□□□□ 0.37
HDAC7-227ENST00000548080 HOXD11P31277 338 aaPredicted RBP17.33■□□□□ 0.37
HDAC7-227ENST00000548080 HOXD12P35452 270 aa17.33■□□□□ 0.37
HDAC7-227ENST00000548080 LIG3P49916 1009 aa17.33■□□□□ 0.37
HDAC7-227ENST00000548080 RPL26P61254 145 aaKnown RBP17.33■□□□□ 0.37
HDAC7-227ENST00000548080 ELP6Q0PNE2 266 aa17.33■□□□□ 0.37
HDAC7-227ENST00000548080 RALGDSQ12967 914 aa17.33■□□□□ 0.37
HDAC7-227ENST00000548080 NAB1Q13506 487 aa17.33■□□□□ 0.37
HDAC7-227ENST00000548080 TMEM52BQ4KMG9 183 aa17.33■□□□□ 0.37
HDAC7-227ENST00000548080 TNFAIP8L3Q5GJ75 292 aa17.33■□□□□ 0.37
HDAC7-227ENST00000548080 NEK5Q6P3R8 708 aa17.33■□□□□ 0.37
HDAC7-227ENST00000548080 SLC23A3Q6PIS1 610 aa17.33■□□□□ 0.37
HDAC7-227ENST00000548080 ADGRD1Q6QNK2 874 aa17.33■□□□□ 0.37
HDAC7-227ENST00000548080 TSPAN33Q86UF1 283 aa17.33■□□□□ 0.37
HDAC7-227ENST00000548080 UNC5BQ8IZJ1 945 aa17.33■□□□□ 0.37
HDAC7-227ENST00000548080 CEP76Q8TAP6 659 aa17.33■□□□□ 0.37
HDAC7-227ENST00000548080 BRSK1Q8TDC3 778 aa17.33■□□□□ 0.37
HDAC7-227ENST00000548080 BLOC1S5Q8TDH9 187 aa17.33■□□□□ 0.37
HDAC7-227ENST00000548080 DCAKDQ8WVC6 231 aa17.33■□□□□ 0.37
HDAC7-227ENST00000548080 CDKL2Q92772 493 aa17.33■□□□□ 0.37
HDAC7-227ENST00000548080 CERS2Q96G23 380 aa17.33■□□□□ 0.37
HDAC7-227ENST00000548080 ZNF778Q96MU6 729 aa17.33■□□□□ 0.37
HDAC7-227ENST00000548080 EDEM2Q9BV94 578 aa17.33■□□□□ 0.37
HDAC7-227ENST00000548080 CTNNAL1Q9UBT7 734 aa17.33■□□□□ 0.37
HDAC7-227ENST00000548080 TBK1Q9UHD2 729 aa17.33■□□□□ 0.37
HDAC7-227ENST00000548080 RPL26L1Q9UNX3 145 aaKnown RBP17.33■□□□□ 0.37
HDAC7-227ENST00000548080 IKBKGQ9Y6K9 419 aa17.33■□□□□ 0.37
HDAC7-227ENST00000548080 DMXL1Q9Y485 3027 aa17.32■□□□□ 0.36
HDAC7-227ENST00000548080 NPIPB15A6NHN6 443 aaPredicted RBP17.32■□□□□ 0.36
HDAC7-227ENST00000548080 ANKRD66B4E2M5 251 aa17.32■□□□□ 0.36
HDAC7-227ENST00000548080 INHBAP08476 426 aa17.32■□□□□ 0.36
HDAC7-227ENST00000548080 C6P13671 934 aa17.32■□□□□ 0.36
HDAC7-227ENST00000548080 PAMP19021 973 aa17.32■□□□□ 0.36
HDAC7-227ENST00000548080 ATP5DP30049 168 aa17.32■□□□□ 0.36
HDAC7-227ENST00000548080 DPP6P42658 865 aa17.32■□□□□ 0.36
HDAC7-227ENST00000548080 AFF3P51826 1226 aaKnown RBP17.32■□□□□ 0.36
HDAC7-227ENST00000548080 EPHB1P54762 984 aa17.32■□□□□ 0.36
HDAC7-227ENST00000548080 GRIK2Q13002 908 aa17.32■□□□□ 0.36
HDAC7-227ENST00000548080 SGCGQ13326 291 aa17.32■□□□□ 0.36
HDAC7-227ENST00000548080 QPCTQ16769 361 aa17.32■□□□□ 0.36
HDAC7-227ENST00000548080 TSTD2Q5T7W7 516 aa17.32■□□□□ 0.36
HDAC7-227ENST00000548080 DPPA4Q7L190 304 aa17.32■□□□□ 0.36
HDAC7-227ENST00000548080 SLC26A11Q86WA9 606 aa17.32■□□□□ 0.36
HDAC7-227ENST00000548080 C1QTNF2Q9BXJ5 285 aa17.32■□□□□ 0.36
HDAC7-227ENST00000548080 CAAP1Q9H8G2 361 aa17.32■□□□□ 0.36
HDAC7-227ENST00000548080 TREX1Q9NSU2 369 aa17.32■□□□□ 0.36
HDAC7-227ENST00000548080 C20orf96Q9NUD7 363 aaPredicted RBP17.32■□□□□ 0.36
HDAC7-227ENST00000548080 PHTF1Q9UMS5 762 aa17.32■□□□□ 0.36
HDAC7-227ENST00000548080 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.31■□□□□ 0.36
HDAC7-227ENST00000548080 A0A1W2PR77 199 aa17.31■□□□□ 0.36
HDAC7-227ENST00000548080 CCDC78A2IDD5 438 aa17.31■□□□□ 0.36
HDAC7-227ENST00000548080 MROH6A6NGR9 719 aa17.31■□□□□ 0.36
HDAC7-227ENST00000548080 ELFN1P0C7U0 828 aa17.31■□□□□ 0.36
HDAC7-227ENST00000548080 PIRTP0C851 137 aa17.31■□□□□ 0.36
HDAC7-227ENST00000548080 ERVK-10P10266 1014 aa17.31■□□□□ 0.36
HDAC7-227ENST00000548080 LHCGRP22888 699 aa17.31■□□□□ 0.36
HDAC7-227ENST00000548080 CD38P28907 300 aa17.31■□□□□ 0.36
HDAC7-227ENST00000548080 POLR2LP62875 67 aaKnown RBP17.31■□□□□ 0.36
HDAC7-227ENST00000548080 RACK1P63244 317 aaKnown RBP17.31■□□□□ 0.36
HDAC7-227ENST00000548080 TMED2Q15363 201 aa17.31■□□□□ 0.36
HDAC7-227ENST00000548080 PRAMEF14Q5SWL7 426 aa17.31■□□□□ 0.36
HDAC7-227ENST00000548080 ESRP1Q6NXG1 681 aaKnown RBP17.31■□□□□ 0.36
HDAC7-227ENST00000548080 LIPIQ6XZB0 460 aa17.31■□□□□ 0.36
HDAC7-227ENST00000548080 GCNT7Q6ZNI0 430 aa17.31■□□□□ 0.36
HDAC7-227ENST00000548080 MARK2Q7KZI7 788 aaKnown RBP17.31■□□□□ 0.36
HDAC7-227ENST00000548080 KCNMB4Q86W47 210 aa17.31■□□□□ 0.36
HDAC7-227ENST00000548080 CYP4X1Q8N118 509 aa17.31■□□□□ 0.36
HDAC7-227ENST00000548080 IL21RQ9HBE5 538 aa17.31■□□□□ 0.36
HDAC7-227ENST00000548080 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.31■□□□□ 0.36
HDAC7-227ENST00000548080 ZNF180Q9UJW8 692 aa17.31■□□□□ 0.36
HDAC7-227ENST00000548080 RIMKLBQ9ULI2 386 aa17.31■□□□□ 0.36
HDAC7-227ENST00000548080 SNX11Q9Y5W9 270 aa17.31■□□□□ 0.36
HDAC7-227ENST00000548080 CEP250Q9BV73 2442 aa17.31■□□□□ 0.36
HDAC7-227ENST00000548080 MYLKQ15746 1914 aa17.31■□□□□ 0.36
HDAC7-227ENST00000548080 POM121BA6NF01 834 aa17.31■□□□□ 0.36
HDAC7-227ENST00000548080 PRAMEF26H0Y7S4 382 aa17.31■□□□□ 0.36
HDAC7-227ENST00000548080 ARHGAP33O14559 1287 aa17.31■□□□□ 0.36
HDAC7-227ENST00000548080 LDB2O43679 373 aa17.31■□□□□ 0.36
HDAC7-227ENST00000548080 LZTS3O60299 673 aaPredicted RBP17.31■□□□□ 0.36
HDAC7-227ENST00000548080 TM7SF2O76062 418 aa17.31■□□□□ 0.36
HDAC7-227ENST00000548080 CRTAMO95727 393 aa17.31■□□□□ 0.36
HDAC7-227ENST00000548080 GM2AP17900 193 aa17.31■□□□□ 0.36
HDAC7-227ENST00000548080 HNRNPA2B1P22626 353 aaKnown RBP17.31■□□□□ 0.36
HDAC7-227ENST00000548080 AKT2P31751 481 aa17.31■□□□□ 0.36
HDAC7-227ENST00000548080 VIPR1P32241 457 aa17.31■□□□□ 0.36
HDAC7-227ENST00000548080 HNF1BP35680 557 aa17.31■□□□□ 0.36
HDAC7-227ENST00000548080 GRIA4P48058 902 aa17.31■□□□□ 0.36
HDAC7-227ENST00000548080 MAGOHP61326 146 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms