RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 PCDH9Q9HC56 1237 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 SPTLC3Q9NUV7 552 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 DTLQ9NZJ0 730 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 SEPT10Q9P0V9 454 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 ZNHIT2Q9UHR6 403 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 LCMT1Q9UIC8 334 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 NENFQ9UMX5 172 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 SLC17A4Q9Y2C5 497 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 PRKAB1Q9Y478 270 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 LOXL2Q9Y4K0 774 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 HYOU1Q9Y4L1 999 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 ST14Q9Y5Y6 855 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 IGSF10Q6WRI0 2623 aa6.67□□□□□ -1.34
SCAF11-211ENST00000547950 CELSR3Q9NYQ7 3312 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 ADAMTS20P59510 1910 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 ACACAQ13085 2346 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 C1orf232A0A0U1RR37 186 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 SSU72P8A0A1W2PR75 194 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 CAPN8A6NHC0 703 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 ANKRD66B4E2M5 251 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 APOL1O14791 398 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 PPM1DO15297 605 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 ZW10O43264 779 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 CPNE6O95741 557 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 SOD1P00441 154 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 ATP1A1P05023 1023 aaKnown RBP6.66□□□□□ -1.34
SCAF11-211ENST00000547950 IVLP07476 585 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 ZNF30P17039 623 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 MPSTP25325 297 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 TEAD1P28347 426 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 CD1CP29017 333 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 MAN1A1P33908 653 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 ETV5P41161 510 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 ACTR1BP42025 376 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 ARHGAP25P42331 645 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 ACTR1AP61163 376 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 DYNLT1P63172 113 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 ZBTB17Q13105 803 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 PEX6Q13608 980 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 TRIM14Q14142 442 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 GALNT3Q14435 633 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 LLGL1Q15334 1064 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 PCSK7Q16549 785 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 TUSC1Q2TAM9 212 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 PYCR3Q53H96 274 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 KIAA1614Q5VZ46 1190 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 PCSK4Q6UW60 755 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 NPNTQ6UXI9 565 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 ZNF574Q6ZN55 896 aaPredicted RBP6.66□□□□□ -1.34
SCAF11-211ENST00000547950 VASH1Q7L8A9 365 aaPredicted RBP6.66□□□□□ -1.34
SCAF11-211ENST00000547950 CHST15Q7LFX5 561 aaPredicted RBP6.66□□□□□ -1.34
SCAF11-211ENST00000547950 CLEC14AQ86T13 490 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 NLRP8Q86W28 1048 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 C17orf82Q86X59 251 aaPredicted RBP6.66□□□□□ -1.34
SCAF11-211ENST00000547950 ZFAND4Q86XD8 727 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 RFX6Q8HWS3 928 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 GALNT13Q8IUC8 556 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 NRSN1Q8IZ57 195 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 NAGSQ8N159 534 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 CNTD1Q8N815 330 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 RCBTB1Q8NDN9 531 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 CCHCR1Q8TD31 782 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 USP7Q93009 1102 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 FATE1Q969F0 183 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 TMEM159Q96B96 161 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 FAF2Q96CS3 445 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 HDAC11Q96DB2 347 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 AGAP3Q96P47 875 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 OR2M4Q96R27 311 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 CCNL2Q96S94 520 aaPredicted RBP6.66□□□□□ -1.34
SCAF11-211ENST00000547950 MLPHQ9BV36 600 aaPredicted RBP6.66□□□□□ -1.34
SCAF11-211ENST00000547950 TDRD1Q9BXT4 1180 aaKnown RBP6.66□□□□□ -1.34
SCAF11-211ENST00000547950 ADGRE3Q9BY15 652 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 CDH19Q9H159 772 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 TSPY26PQ9H489 355 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 FAM83DQ9H4H8 585 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 ABHD10Q9NUJ1 306 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 AKAP7Q9P0M2 348 aaPredicted RBP6.66□□□□□ -1.34
SCAF11-211ENST00000547950 AMACRQ9UHK6 382 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 CNOT6Q9ULM6 557 aaKnown RBP6.66□□□□□ -1.34
SCAF11-211ENST00000547950 PCDHGA7Q9Y5G6 932 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 KNTC1P50748 2209 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 DOCK4Q8N1I0 1966 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 TRPM6Q9BX84 2022 aa6.66□□□□□ -1.34
SCAF11-211ENST00000547950 DOCK9Q9BZ29 2069 aa6.65□□□□□ -1.34
SCAF11-211ENST00000547950 ARID1BQ8NFD5 2236 aaPredicted RBP6.65□□□□□ -1.34
SCAF11-211ENST00000547950 NYNRINQ9P2P1 1898 aaKnown RBP6.65□□□□□ -1.34
SCAF11-211ENST00000547950 PRAMEF33A0A0G2JMD5 474 aa6.65□□□□□ -1.34
SCAF11-211ENST00000547950 FAM181BA6NEQ2 426 aa6.65□□□□□ -1.34
SCAF11-211ENST00000547950 C3orf70A6NLC5 250 aaPredicted RBP6.65□□□□□ -1.34
SCAF11-211ENST00000547950 K7ENP7 123 aa6.65□□□□□ -1.34
SCAF11-211ENST00000547950 ERVH48-1M5A8F1 160 aa6.65□□□□□ -1.34
SCAF11-211ENST00000547950 NVLO15381 856 aaKnown RBP6.65□□□□□ -1.34
SCAF11-211ENST00000547950 EFSO43281 561 aa6.65□□□□□ -1.34
SCAF11-211ENST00000547950 SNX2O60749 519 aa6.65□□□□□ -1.34
SCAF11-211ENST00000547950 PRAMEF10O60809 474 aa6.65□□□□□ -1.34
SCAF11-211ENST00000547950 MFAP3LO75121 409 aa6.65□□□□□ -1.34
SCAF11-211ENST00000547950 C1QL1O75973 258 aa6.65□□□□□ -1.34
SCAF11-211ENST00000547950 EML2O95834 649 aa6.65□□□□□ -1.34
SCAF11-211ENST00000547950 SLC4A1P02730 911 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms