RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 AP1B1Q10567 949 aa13.24□□□□□ -0.29
CPSF6-204ENST00000547486 SQSTM1Q13501 440 aa13.24□□□□□ -0.29
CPSF6-204ENST00000547486 GALNT3Q14435 633 aa13.24□□□□□ -0.29
CPSF6-204ENST00000547486 HENMT1Q5T8I9 393 aaKnown RBP13.24□□□□□ -0.29
CPSF6-204ENST00000547486 LYSMD3Q7Z3D4 306 aa13.24□□□□□ -0.29
CPSF6-204ENST00000547486 ZNF761Q86XN6 746 aaPredicted RBP13.24□□□□□ -0.29
CPSF6-204ENST00000547486 GALNT13Q8IUC8 556 aa13.24□□□□□ -0.29
CPSF6-204ENST00000547486 TADA1Q96BN2 335 aa13.24□□□□□ -0.29
CPSF6-204ENST00000547486 IMP4Q96G21 291 aaKnown RBP13.24□□□□□ -0.29
CPSF6-204ENST00000547486 CCDC74BQ96LY2 380 aa13.24□□□□□ -0.29
CPSF6-204ENST00000547486 AGAP3Q96P47 875 aa13.24□□□□□ -0.29
CPSF6-204ENST00000547486 OLFM3Q96PB7 478 aa13.24□□□□□ -0.29
CPSF6-204ENST00000547486 MAK16Q9BXY0 300 aaKnown RBP13.24□□□□□ -0.29
CPSF6-204ENST00000547486 HAUS2Q9NVX0 235 aa13.24□□□□□ -0.29
CPSF6-204ENST00000547486 DNPEPQ9ULA0 475 aa13.24□□□□□ -0.29
CPSF6-204ENST00000547486 UNC13CQ8NB66 2214 aa13.24□□□□□ -0.29
CPSF6-204ENST00000547486 APOL1O14791 398 aa13.23□□□□□ -0.29
CPSF6-204ENST00000547486 PIRTP0C851 137 aa13.23□□□□□ -0.29
CPSF6-204ENST00000547486 FGF3P11487 239 aaPredicted RBP13.23□□□□□ -0.29
CPSF6-204ENST00000547486 TNNT1P13805 278 aa13.23□□□□□ -0.29
CPSF6-204ENST00000547486 WT1P19544 449 aaPredicted RBP13.23□□□□□ -0.29
CPSF6-204ENST00000547486 PTMSP20962 102 aa13.23□□□□□ -0.29
CPSF6-204ENST00000547486 CSF2RBP32927 897 aa13.23□□□□□ -0.29
CPSF6-204ENST00000547486 NOP2P46087 812 aaKnown RBP13.23□□□□□ -0.29
CPSF6-204ENST00000547486 ARSDP51689 593 aa13.23□□□□□ -0.29
CPSF6-204ENST00000547486 LIMK2P53671 638 aa13.23□□□□□ -0.29
CPSF6-204ENST00000547486 BIRC2Q13490 618 aa13.23□□□□□ -0.29
CPSF6-204ENST00000547486 ZNF648Q5T619 568 aaPredicted RBP13.23□□□□□ -0.29
CPSF6-204ENST00000547486 LRRC38Q5VT99 294 aa13.23□□□□□ -0.29
CPSF6-204ENST00000547486 CHST15Q7LFX5 561 aaPredicted RBP13.23□□□□□ -0.29
CPSF6-204ENST00000547486 SFRP1Q8N474 314 aa13.23□□□□□ -0.29
CPSF6-204ENST00000547486 RNF214Q8ND24 703 aa13.23□□□□□ -0.29
CPSF6-204ENST00000547486 SPATA22Q8NHS9 363 aa13.23□□□□□ -0.29
CPSF6-204ENST00000547486 SLC37A2Q8TED4 501 aa13.23□□□□□ -0.29
CPSF6-204ENST00000547486 PMEPA1Q969W9 287 aa13.23□□□□□ -0.29
CPSF6-204ENST00000547486 ZNF830Q96NB3 372 aaPredicted RBP13.23□□□□□ -0.29
CPSF6-204ENST00000547486 ADGRE3Q9BY15 652 aa13.23□□□□□ -0.29
CPSF6-204ENST00000547486 ARFGAP3Q9NP61 516 aa13.23□□□□□ -0.29
CPSF6-204ENST00000547486 VPS18Q9P253 973 aa13.23□□□□□ -0.29
CPSF6-204ENST00000547486 SAE1Q9UBE0 346 aaPredicted RBP13.23□□□□□ -0.29
CPSF6-204ENST00000547486 TBC1D29Q9UFV1 150 aa13.23□□□□□ -0.29
CPSF6-204ENST00000547486 ARHGEF17Q96PE2 2063 aaPredicted RBP13.23□□□□□ -0.29
CPSF6-204ENST00000547486 RGSL1A5PLK6 1076 aa13.22□□□□□ -0.29
CPSF6-204ENST00000547486 MT-CYBP00156 380 aaPredicted RBP13.22□□□□□ -0.29
CPSF6-204ENST00000547486 KRT1P04264 644 aa13.22□□□□□ -0.29
CPSF6-204ENST00000547486 LIPCP11150 499 aa13.22□□□□□ -0.29
CPSF6-204ENST00000547486 COMTP21964 271 aa13.22□□□□□ -0.29
CPSF6-204ENST00000547486 FASLGP48023 281 aa13.22□□□□□ -0.29
CPSF6-204ENST00000547486 DYNLT1P63172 113 aa13.22□□□□□ -0.29
CPSF6-204ENST00000547486 ADCY2Q08462 1091 aa13.22□□□□□ -0.29
CPSF6-204ENST00000547486 TBX2Q13207 712 aaPredicted RBP13.22□□□□□ -0.29
CPSF6-204ENST00000547486 PEX6Q13608 980 aa13.22□□□□□ -0.29
CPSF6-204ENST00000547486 LRP8Q14114 963 aa13.22□□□□□ -0.29
CPSF6-204ENST00000547486 PDK1Q15118 436 aa13.22□□□□□ -0.29
CPSF6-204ENST00000547486 TCEAL1Q15170 157 aa13.22□□□□□ -0.29
CPSF6-204ENST00000547486 LLGL1Q15334 1064 aa13.22□□□□□ -0.29
CPSF6-204ENST00000547486 PCSK7Q16549 785 aa13.22□□□□□ -0.29
CPSF6-204ENST00000547486 CLPPQ16740 277 aaPredicted RBP13.22□□□□□ -0.29
CPSF6-204ENST00000547486 SKOR2Q2VWA4 1001 aaPredicted RBP13.22□□□□□ -0.29
CPSF6-204ENST00000547486 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.22□□□□□ -0.29
CPSF6-204ENST00000547486 IYDQ6PHW0 289 aa13.22□□□□□ -0.29
CPSF6-204ENST00000547486 MFSD7Q6UXD7 560 aa13.22□□□□□ -0.29
CPSF6-204ENST00000547486 TMC3Q7Z5M5 1100 aa13.22□□□□□ -0.29
CPSF6-204ENST00000547486 NT5DC3Q86UY8 548 aa13.22□□□□□ -0.29
CPSF6-204ENST00000547486 VSIG1Q86XK7 387 aa13.22□□□□□ -0.29
CPSF6-204ENST00000547486 DTX1Q86Y01 620 aa13.22□□□□□ -0.29
CPSF6-204ENST00000547486 RFX6Q8HWS3 928 aa13.22□□□□□ -0.29
CPSF6-204ENST00000547486 RHOT2Q8IXI1 618 aa13.22□□□□□ -0.29
CPSF6-204ENST00000547486 RHOT1Q8IXI2 618 aa13.22□□□□□ -0.29
CPSF6-204ENST00000547486 GPR26Q8NDV2 337 aa13.22□□□□□ -0.29
CPSF6-204ENST00000547486 OR4D9Q8NGE8 314 aa13.22□□□□□ -0.29
CPSF6-204ENST00000547486 CCHCR1Q8TD31 782 aa13.22□□□□□ -0.29
CPSF6-204ENST00000547486 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.22□□□□□ -0.29
CPSF6-204ENST00000547486 SLC25A51Q9H1U9 297 aa13.22□□□□□ -0.29
CPSF6-204ENST00000547486 TSPY26PQ9H489 355 aa13.22□□□□□ -0.29
CPSF6-204ENST00000547486 ZFYVE1Q9HBF4 777 aa13.22□□□□□ -0.29
CPSF6-204ENST00000547486 KCNK4Q9NYG8 393 aa13.22□□□□□ -0.29
CPSF6-204ENST00000547486 PKD2L2Q9NZM6 624 aa13.22□□□□□ -0.29
CPSF6-204ENST00000547486 SEPT10Q9P0V9 454 aa13.22□□□□□ -0.29
CPSF6-204ENST00000547486 ATXN10Q9UBB4 475 aa13.22□□□□□ -0.29
CPSF6-204ENST00000547486 SHOC2Q9UQ13 582 aa13.22□□□□□ -0.29
CPSF6-204ENST00000547486 KCNK6Q9Y257 313 aa13.22□□□□□ -0.29
CPSF6-204ENST00000547486 ADGRG1Q9Y653 693 aa13.22□□□□□ -0.29
CPSF6-204ENST00000547486 A6NCN8 305 aa13.21□□□□□ -0.29
CPSF6-204ENST00000547486 HGSO14964 777 aaPredicted RBP13.21□□□□□ -0.29
CPSF6-204ENST00000547486 AURKAO14965 403 aa13.21□□□□□ -0.29
CPSF6-204ENST00000547486 ZW10O43264 779 aa13.21□□□□□ -0.29
CPSF6-204ENST00000547486 NUAK1O60285 661 aa13.21□□□□□ -0.29
CPSF6-204ENST00000547486 ZIC2O95409 532 aaPredicted RBP13.21□□□□□ -0.29
CPSF6-204ENST00000547486 THRAP10827 490 aa13.21□□□□□ -0.29
CPSF6-204ENST00000547486 ACP5P13686 325 aa13.21□□□□□ -0.29
CPSF6-204ENST00000547486 ZNF8P17098 575 aaPredicted RBP13.21□□□□□ -0.29
CPSF6-204ENST00000547486 CDKN2BP42772 138 aa13.21□□□□□ -0.29
CPSF6-204ENST00000547486 CDK18Q07002 472 aa13.21□□□□□ -0.29
CPSF6-204ENST00000547486 TAZQ16635 292 aa13.21□□□□□ -0.29
CPSF6-204ENST00000547486 LINC00303Q3SY05 128 aa13.21□□□□□ -0.29
CPSF6-204ENST00000547486 ALS2CLQ60I27 953 aa13.21□□□□□ -0.29
CPSF6-204ENST00000547486 TMEM71Q6P5X7 295 aa13.21□□□□□ -0.29
CPSF6-204ENST00000547486 VASH2Q86V25 355 aa13.21□□□□□ -0.29
CPSF6-204ENST00000547486 B3GNT4Q9C0J1 378 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms