RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 CACNA2D3Q8IZS8 1091 aa12.45□□□□□ -0.42
COPS7A-221ENST00000546229 ZSCAN1Q8NBB4 408 aa12.45□□□□□ -0.42
COPS7A-221ENST00000546229 TSGA13Q96PP4 275 aa12.45□□□□□ -0.42
COPS7A-221ENST00000546229 POLR1EQ9GZS1 481 aaKnown RBP12.45□□□□□ -0.42
COPS7A-221ENST00000546229 MRPL47Q9HD33 250 aaKnown RBP12.45□□□□□ -0.42
COPS7A-221ENST00000546229 WDR70Q9NW82 654 aa12.45□□□□□ -0.42
COPS7A-221ENST00000546229 SLC39A1Q9NY26 324 aa12.45□□□□□ -0.42
COPS7A-221ENST00000546229 AKAP7Q9P0M2 348 aaPredicted RBP12.45□□□□□ -0.42
COPS7A-221ENST00000546229 PRKAB1Q9Y478 270 aa12.45□□□□□ -0.42
COPS7A-221ENST00000546229 TEX15Q9BXT5 2789 aa12.45□□□□□ -0.42
COPS7A-221ENST00000546229 GOLGA6CA6NDK9 693 aa12.44□□□□□ -0.42
COPS7A-221ENST00000546229 GOLGA6BA6NDN3 693 aa12.44□□□□□ -0.42
COPS7A-221ENST00000546229 INPP4BO15327 924 aa12.44□□□□□ -0.42
COPS7A-221ENST00000546229 CLDN7O95471 211 aa12.44□□□□□ -0.42
COPS7A-221ENST00000546229 ATP1A1P05023 1023 aaKnown RBP12.44□□□□□ -0.42
COPS7A-221ENST00000546229 GOLGA6DP0CG33 693 aa12.44□□□□□ -0.42
COPS7A-221ENST00000546229 CDK11BP21127 795 aaKnown RBP12.44□□□□□ -0.42
COPS7A-221ENST00000546229 OAS2P29728 719 aaKnown RBP12.44□□□□□ -0.42
COPS7A-221ENST00000546229 CSTF2P33240 577 aaKnown RBP eCLIP12.44□□□□□ -0.42
COPS7A-221ENST00000546229 HHEXQ03014 270 aa12.44□□□□□ -0.42
COPS7A-221ENST00000546229 CDC20Q12834 499 aa12.44□□□□□ -0.42
COPS7A-221ENST00000546229 PIGHQ14442 188 aaPredicted RBP12.44□□□□□ -0.42
COPS7A-221ENST00000546229 ANO6Q4KMQ2 910 aa12.44□□□□□ -0.42
COPS7A-221ENST00000546229 ATP13A4Q4VNC1 1196 aa12.44□□□□□ -0.42
COPS7A-221ENST00000546229 CCDC183Q5T5S1 534 aa12.44□□□□□ -0.42
COPS7A-221ENST00000546229 IYDQ6PHW0 289 aa12.44□□□□□ -0.42
COPS7A-221ENST00000546229 GALNT13Q8IUC8 556 aa12.44□□□□□ -0.42
COPS7A-221ENST00000546229 PQLC3Q8N755 202 aa12.44□□□□□ -0.42
COPS7A-221ENST00000546229 PAF1Q8N7H5 531 aa12.44□□□□□ -0.42
COPS7A-221ENST00000546229 EXD1Q8NHP7 514 aa12.44□□□□□ -0.42
COPS7A-221ENST00000546229 TEFMQ96QE5 360 aaKnown RBP12.44□□□□□ -0.42
COPS7A-221ENST00000546229 TRIB3Q96RU7 358 aa12.44□□□□□ -0.42
COPS7A-221ENST00000546229 ASPSCR1Q9BZE9 553 aa12.44□□□□□ -0.42
COPS7A-221ENST00000546229 GOLGA6AQ9NYA3 693 aa12.44□□□□□ -0.42
COPS7A-221ENST00000546229 AMACRQ9UHK6 382 aa12.44□□□□□ -0.42
COPS7A-221ENST00000546229 CHKBQ9Y259 395 aa12.44□□□□□ -0.42
COPS7A-221ENST00000546229 SPTAN1Q13813 2472 aaKnown RBP12.43□□□□□ -0.42
COPS7A-221ENST00000546229 LILRA5A6NI73 299 aa12.43□□□□□ -0.42
COPS7A-221ENST00000546229 ZNF891A8MT65 544 aaPredicted RBP12.43□□□□□ -0.42
COPS7A-221ENST00000546229 MATN3O15232 486 aa12.43□□□□□ -0.42
COPS7A-221ENST00000546229 NKX2-8O15522 239 aa12.43□□□□□ -0.42
COPS7A-221ENST00000546229 C9P02748 559 aa12.43□□□□□ -0.42
COPS7A-221ENST00000546229 PYGLP06737 847 aa12.43□□□□□ -0.42
COPS7A-221ENST00000546229 ANKRD34CP0C6C1 535 aa12.43□□□□□ -0.42
COPS7A-221ENST00000546229 F8A1P23610 371 aa12.43□□□□□ -0.42
COPS7A-221ENST00000546229 NFKBIAP25963 317 aa12.43□□□□□ -0.42
COPS7A-221ENST00000546229 STAT5AP42229 794 aa12.43□□□□□ -0.42
COPS7A-221ENST00000546229 SPINT3P49223 89 aa12.43□□□□□ -0.42
COPS7A-221ENST00000546229 EPHA4P54764 986 aa12.43□□□□□ -0.42
COPS7A-221ENST00000546229 RPL26P61254 145 aaKnown RBP12.43□□□□□ -0.42
COPS7A-221ENST00000546229 FOXK1P85037 733 aa12.43□□□□□ -0.42
COPS7A-221ENST00000546229 GBE1Q04446 702 aa12.43□□□□□ -0.42
COPS7A-221ENST00000546229 SLC10A2Q12908 348 aaPredicted RBP12.43□□□□□ -0.42
COPS7A-221ENST00000546229 PEX6Q13608 980 aa12.43□□□□□ -0.42
COPS7A-221ENST00000546229 NR1I3Q14994 352 aa12.43□□□□□ -0.42
COPS7A-221ENST00000546229 IQCB1Q15051 598 aa12.43□□□□□ -0.42
COPS7A-221ENST00000546229 QPCTQ16769 361 aa12.43□□□□□ -0.42
COPS7A-221ENST00000546229 CRTC2Q53ET0 693 aaPredicted RBP12.43□□□□□ -0.42
COPS7A-221ENST00000546229 DCAF12Q5T6F0 453 aa12.43□□□□□ -0.42
COPS7A-221ENST00000546229 FAM129CQ86XR2 697 aa12.43□□□□□ -0.42
COPS7A-221ENST00000546229 BBS5Q8N3I7 341 aa12.43□□□□□ -0.42
COPS7A-221ENST00000546229 IL22RA1Q8N6P7 574 aa12.43□□□□□ -0.42
COPS7A-221ENST00000546229 CNTD1Q8N815 330 aa12.43□□□□□ -0.42
COPS7A-221ENST00000546229 CCDC112Q8NEF3 446 aa12.43□□□□□ -0.42
COPS7A-221ENST00000546229 LRRN4Q8WUT4 740 aa12.43□□□□□ -0.42
COPS7A-221ENST00000546229 TADA1Q96BN2 335 aa12.43□□□□□ -0.42
COPS7A-221ENST00000546229 CTRCQ99895 268 aa12.43□□□□□ -0.42
COPS7A-221ENST00000546229 ZNF670Q9BS34 389 aa12.43□□□□□ -0.42
COPS7A-221ENST00000546229 BRD8Q9H0E9 1235 aa12.43□□□□□ -0.42
COPS7A-221ENST00000546229 FBXO8Q9NRD0 319 aa12.43□□□□□ -0.42
COPS7A-221ENST00000546229 DTLQ9NZJ0 730 aa12.43□□□□□ -0.42
COPS7A-221ENST00000546229 SCHIP1Q9P0W5 487 aaPredicted RBP12.43□□□□□ -0.42
COPS7A-221ENST00000546229 NFKBIL1Q9UBC1 381 aaPredicted RBP12.43□□□□□ -0.42
COPS7A-221ENST00000546229 ANAPC7Q9UJX3 599 aa12.43□□□□□ -0.42
COPS7A-221ENST00000546229 RPL26L1Q9UNX3 145 aaKnown RBP12.43□□□□□ -0.42
COPS7A-221ENST00000546229 KCNK6Q9Y257 313 aa12.43□□□□□ -0.42
COPS7A-221ENST00000546229 TRBV23OR9-2A0A075B6M9 112 aa12.42□□□□□ -0.42
COPS7A-221ENST00000546229 A0A087X0T9 212 aa12.42□□□□□ -0.42
COPS7A-221ENST00000546229 A0A1W2PQJ5 194 aa12.42□□□□□ -0.42
COPS7A-221ENST00000546229 ZW10O43264 779 aa12.42□□□□□ -0.42
COPS7A-221ENST00000546229 NUAK1O60285 661 aa12.42□□□□□ -0.42
COPS7A-221ENST00000546229 STK17BO94768 372 aa12.42□□□□□ -0.42
COPS7A-221ENST00000546229 FAM228BP0C875 321 aa12.42□□□□□ -0.42
COPS7A-221ENST00000546229 F3P13726 295 aa12.42□□□□□ -0.42
COPS7A-221ENST00000546229 ZNF28P17035 718 aa12.42□□□□□ -0.42
COPS7A-221ENST00000546229 CASRP41180 1078 aa12.42□□□□□ -0.42
COPS7A-221ENST00000546229 CLCNKAP51800 687 aa12.42□□□□□ -0.42
COPS7A-221ENST00000546229 GFERP55789 205 aa12.42□□□□□ -0.42
COPS7A-221ENST00000546229 TAS2R40P59535 323 aa12.42□□□□□ -0.42
COPS7A-221ENST00000546229 ABHD18Q0P651 414 aa12.42□□□□□ -0.42
COPS7A-221ENST00000546229 ZBTB17Q13105 803 aa12.42□□□□□ -0.42
COPS7A-221ENST00000546229 MAP7Q14244 749 aa12.42□□□□□ -0.42
COPS7A-221ENST00000546229 SKIDA1Q1XH10 827 aa12.42□□□□□ -0.42
COPS7A-221ENST00000546229 FAM182AQ5T1J6 154 aa12.42□□□□□ -0.42
COPS7A-221ENST00000546229 ATP1A1-AS1Q5TC04 95 aa12.42□□□□□ -0.42
COPS7A-221ENST00000546229 PTRH1Q86Y79 214 aaKnown RBP12.42□□□□□ -0.42
COPS7A-221ENST00000546229 UNC5BQ8IZJ1 945 aa12.42□□□□□ -0.42
COPS7A-221ENST00000546229 NLGN4XQ8N0W4 816 aa12.42□□□□□ -0.42
COPS7A-221ENST00000546229 NLGN4YQ8NFZ3 816 aaPredicted RBP12.42□□□□□ -0.42
COPS7A-221ENST00000546229 OR10G6Q8NH81 332 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms