RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 BBIP1A8MTZ0 92 aa15.72■□□□□ 0.11
LDLR-204ENST00000545707 FAM155AB1AL88 458 aaPredicted RBP15.72■□□□□ 0.11
LDLR-204ENST00000545707 ECI2O75521 394 aa15.72■□□□□ 0.11
LDLR-204ENST00000545707 PSMA4P25789 261 aaKnown RBP15.72■□□□□ 0.11
LDLR-204ENST00000545707 CLCN2P51788 898 aa15.72■□□□□ 0.11
LDLR-204ENST00000545707 MERTKQ12866 999 aa15.72■□□□□ 0.11
LDLR-204ENST00000545707 NFYCQ13952 458 aa15.72■□□□□ 0.11
LDLR-204ENST00000545707 TAF1CQ15572 869 aaPredicted RBP15.72■□□□□ 0.11
LDLR-204ENST00000545707 CAMK1DQ8IU85 385 aa15.72■□□□□ 0.11
LDLR-204ENST00000545707 CLVS1Q8IUQ0 354 aaPredicted RBP15.72■□□□□ 0.11
LDLR-204ENST00000545707 CDKN2AIPNLQ96HQ2 116 aa15.72■□□□□ 0.11
LDLR-204ENST00000545707 POLR1EQ9GZS1 481 aaKnown RBP15.72■□□□□ 0.11
LDLR-204ENST00000545707 ZNF225Q9UK10 706 aa15.72■□□□□ 0.11
LDLR-204ENST00000545707 SLC8A2Q9UPR5 921 aa15.72■□□□□ 0.11
LDLR-204ENST00000545707 ASB1Q9Y576 335 aa15.72■□□□□ 0.11
LDLR-204ENST00000545707 GPR45Q9Y5Y3 372 aa15.72■□□□□ 0.11
LDLR-204ENST00000545707 NLRC5Q86WI3 1866 aa15.72■□□□□ 0.11
LDLR-204ENST00000545707 NPEPPSL1A6NEC2 478 aa15.72■□□□□ 0.11
LDLR-204ENST00000545707 EI24O14681 340 aa15.72■□□□□ 0.11
LDLR-204ENST00000545707 HSD17B1P14061 328 aa15.72■□□□□ 0.11
LDLR-204ENST00000545707 FASP25445 335 aa15.72■□□□□ 0.11
LDLR-204ENST00000545707 GSK3BP49841 420 aa15.72■□□□□ 0.11
LDLR-204ENST00000545707 STC1P52823 247 aa15.72■□□□□ 0.11
LDLR-204ENST00000545707 EMP3P54852 163 aa15.72■□□□□ 0.11
LDLR-204ENST00000545707 ACVR1Q04771 509 aa15.72■□□□□ 0.11
LDLR-204ENST00000545707 DSC3Q14574 896 aa15.72■□□□□ 0.11
LDLR-204ENST00000545707 INPP5AQ14642 412 aa15.72■□□□□ 0.11
LDLR-204ENST00000545707 SEPHS2Q99611 448 aa15.72■□□□□ 0.11
LDLR-204ENST00000545707 DCUN1D5Q9BTE7 237 aa15.72■□□□□ 0.11
LDLR-204ENST00000545707 ZBED2Q9BTP6 218 aa15.72■□□□□ 0.11
LDLR-204ENST00000545707 MARCH2Q9P0N8 246 aa15.72■□□□□ 0.11
LDLR-204ENST00000545707 ACTR3BQ9P1U1 418 aa15.72■□□□□ 0.11
LDLR-204ENST00000545707 THEGQ9P2T0 379 aa15.72■□□□□ 0.11
LDLR-204ENST00000545707 CDC14AQ9UNH5 594 aa15.72■□□□□ 0.11
LDLR-204ENST00000545707 PCDHA9Q9Y5H5 950 aa15.72■□□□□ 0.11
LDLR-204ENST00000545707 AQP12BA6NM10 295 aa15.71■□□□□ 0.11
LDLR-204ENST00000545707 DUSP11O75319 330 aaKnown RBP15.71■□□□□ 0.11
LDLR-204ENST00000545707 PBX3P40426 434 aa15.71■□□□□ 0.11
LDLR-204ENST00000545707 RGRP47804 291 aa15.71■□□□□ 0.11
LDLR-204ENST00000545707 OR1G1P47890 313 aa15.71■□□□□ 0.11
LDLR-204ENST00000545707 IL10RBQ08334 325 aa15.71■□□□□ 0.11
LDLR-204ENST00000545707 LCP2Q13094 533 aa15.71■□□□□ 0.11
LDLR-204ENST00000545707 CHST15Q7LFX5 561 aaPredicted RBP15.71■□□□□ 0.11
LDLR-204ENST00000545707 SYVN1Q86TM6 617 aa15.71■□□□□ 0.11
LDLR-204ENST00000545707 AQP12AQ8IXF9 295 aa15.71■□□□□ 0.11
LDLR-204ENST00000545707 ATP6V0D2Q8N8Y2 350 aa15.71■□□□□ 0.11
LDLR-204ENST00000545707 OR4K2Q8NGD2 314 aa15.71■□□□□ 0.11
LDLR-204ENST00000545707 BRSK1Q8TDC3 778 aa15.71■□□□□ 0.11
LDLR-204ENST00000545707 TMEM125Q96AQ2 219 aa15.71■□□□□ 0.11
LDLR-204ENST00000545707 BTN2A3PQ96KV6 586 aa15.71■□□□□ 0.11
LDLR-204ENST00000545707 MYRFLQ96LU7 910 aa15.71■□□□□ 0.11
LDLR-204ENST00000545707 CDK15Q96Q40 435 aa15.71■□□□□ 0.11
LDLR-204ENST00000545707 HBEGFQ99075 208 aa15.71■□□□□ 0.11
LDLR-204ENST00000545707 GPR21Q99679 349 aa15.71■□□□□ 0.11
LDLR-204ENST00000545707 GID8Q9NWU2 228 aa15.71■□□□□ 0.11
LDLR-204ENST00000545707 ANKRD12Q6UB98 2062 aa15.71■□□□□ 0.11
LDLR-204ENST00000545707 IGLV3-10A0A075B6K4 115 aa15.7■□□□□ 0.1
LDLR-204ENST00000545707 ACOX3O15254 700 aa15.7■□□□□ 0.1
LDLR-204ENST00000545707 OR1I1O60431 355 aa15.7■□□□□ 0.1
LDLR-204ENST00000545707 TYMPP19971 482 aa15.7■□□□□ 0.1
LDLR-204ENST00000545707 YAP1P46937 504 aaKnown RBP15.7■□□□□ 0.1
LDLR-204ENST00000545707 CCT8P50990 548 aa15.7■□□□□ 0.1
LDLR-204ENST00000545707 LIPEQ05469 1076 aa15.7■□□□□ 0.1
LDLR-204ENST00000545707 TBC1D25Q3MII6 688 aa15.7■□□□□ 0.1
LDLR-204ENST00000545707 LCN8Q6JVE9 175 aa15.7■□□□□ 0.1
LDLR-204ENST00000545707 ERI1Q8IV48 349 aaKnown RBP15.7■□□□□ 0.1
LDLR-204ENST00000545707 DCP1BQ8IZD4 617 aaKnown RBP15.7■□□□□ 0.1
LDLR-204ENST00000545707 OR7D4Q8NG98 312 aa15.7■□□□□ 0.1
LDLR-204ENST00000545707 OR2T11Q8NH01 316 aa15.7■□□□□ 0.1
LDLR-204ENST00000545707 STAG3L4Q8TBR4 150 aa15.7■□□□□ 0.1
LDLR-204ENST00000545707 FBXO32Q969P5 355 aa15.7■□□□□ 0.1
LDLR-204ENST00000545707 ALG2Q9H553 416 aa15.7■□□□□ 0.1
LDLR-204ENST00000545707 TFB2MQ9H5Q4 396 aaKnown RBP15.7■□□□□ 0.1
LDLR-204ENST00000545707 INTS7Q9NVH2 962 aaKnown RBP15.7■□□□□ 0.1
LDLR-204ENST00000545707 PCDHB8Q9UN66 801 aa15.7■□□□□ 0.1
LDLR-204ENST00000545707 OAS3Q9Y6K5 1087 aaKnown RBP15.7■□□□□ 0.1
LDLR-204ENST00000545707 PTPRDP23468 1912 aa15.7■□□□□ 0.1
LDLR-204ENST00000545707 A0A0J9YVX5 310 aa15.7■□□□□ 0.1
LDLR-204ENST00000545707 BTN3A1O00481 513 aa15.7■□□□□ 0.1
LDLR-204ENST00000545707 TNPO2O14787 897 aaKnown RBP15.7■□□□□ 0.1
LDLR-204ENST00000545707 MAGEB3O15480 346 aa15.7■□□□□ 0.1
LDLR-204ENST00000545707 MATN4O95460 622 aa15.7■□□□□ 0.1
LDLR-204ENST00000545707 CYBBP04839 570 aa15.7■□□□□ 0.1
LDLR-204ENST00000545707 ZFP36L2P47974 494 aaKnown RBP15.7■□□□□ 0.1
LDLR-204ENST00000545707 SUOXP51687 545 aa15.7■□□□□ 0.1
LDLR-204ENST00000545707 KCNQ1P51787 676 aa15.7■□□□□ 0.1
LDLR-204ENST00000545707 PLIN5Q00G26 463 aa15.7■□□□□ 0.1
LDLR-204ENST00000545707 TAF10Q12962 218 aa15.7■□□□□ 0.1
LDLR-204ENST00000545707 AAK1Q2M2I8 961 aa15.7■□□□□ 0.1
LDLR-204ENST00000545707 TIGD2Q4W5G0 525 aa15.7■□□□□ 0.1
LDLR-204ENST00000545707 ANKS6Q68DC2 871 aa15.7■□□□□ 0.1
LDLR-204ENST00000545707 NADSYN1Q6IA69 706 aa15.7■□□□□ 0.1
LDLR-204ENST00000545707 KIAA2013Q8IYS2 634 aa15.7■□□□□ 0.1
LDLR-204ENST00000545707 RHEBL1Q8TAI7 183 aa15.7■□□□□ 0.1
LDLR-204ENST00000545707 MAGEE2Q8TD90 523 aaPredicted RBP15.7■□□□□ 0.1
LDLR-204ENST00000545707 KIAA1191Q96A73 305 aa15.7■□□□□ 0.1
LDLR-204ENST00000545707 RMDN1Q96DB5 314 aa15.7■□□□□ 0.1
LDLR-204ENST00000545707 CENPNQ96H22 339 aaPredicted RBP15.7■□□□□ 0.1
LDLR-204ENST00000545707 SYT17Q9BSW7 474 aa15.7■□□□□ 0.1
LDLR-204ENST00000545707 CCSER2Q9H7U1 834 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms