RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 TAC4Q86UU9 113 aa12.47□□□□□ -0.41
COL4A6-209ENST00000545689 FAM20CQ8IXL6 584 aa12.47□□□□□ -0.41
COL4A6-209ENST00000545689 FAM47BQ8NA70 645 aa12.47□□□□□ -0.41
COL4A6-209ENST00000545689 CLPTM1LQ96KA5 538 aa12.47□□□□□ -0.41
COL4A6-209ENST00000545689 NOL11Q9H8H0 719 aaKnown RBP12.47□□□□□ -0.41
COL4A6-209ENST00000545689 CHKBQ9Y259 395 aa12.47□□□□□ -0.41
COL4A6-209ENST00000545689 PLK4O00444 970 aa12.47□□□□□ -0.41
COL4A6-209ENST00000545689 CLDN9O95484 217 aa12.47□□□□□ -0.41
COL4A6-209ENST00000545689 SLC35G4P0C7Q5 338 aa12.47□□□□□ -0.41
COL4A6-209ENST00000545689 ABRQ12979 859 aa12.47□□□□□ -0.41
COL4A6-209ENST00000545689 BLMHQ13867 455 aa12.47□□□□□ -0.41
COL4A6-209ENST00000545689 GPR107Q5VW38 600 aa12.47□□□□□ -0.41
COL4A6-209ENST00000545689 LPCAT4Q643R3 524 aa12.47□□□□□ -0.41
COL4A6-209ENST00000545689 CNSTQ6PJW8 725 aa12.47□□□□□ -0.41
COL4A6-209ENST00000545689 SCIMPQ6UWF3 145 aa12.47□□□□□ -0.41
COL4A6-209ENST00000545689 VN1R5Q7Z5H4 357 aa12.47□□□□□ -0.41
COL4A6-209ENST00000545689 BEND7Q8N7W2 519 aaPredicted RBP12.47□□□□□ -0.41
COL4A6-209ENST00000545689 C10orf82Q8WW14 230 aa12.47□□□□□ -0.41
COL4A6-209ENST00000545689 CENPNQ96H22 339 aaPredicted RBP12.47□□□□□ -0.41
COL4A6-209ENST00000545689 HAPLN3Q96S86 360 aa12.47□□□□□ -0.41
COL4A6-209ENST00000545689 GORASP1Q9BQQ3 440 aa12.47□□□□□ -0.41
COL4A6-209ENST00000545689 SEMA3GQ9NS98 782 aa12.47□□□□□ -0.41
COL4A6-209ENST00000545689 KCNU1A8MYU2 1149 aa12.47□□□□□ -0.41
COL4A6-209ENST00000545689 DNM1LO00429 736 aa12.47□□□□□ -0.41
COL4A6-209ENST00000545689 OR6B1O95007 311 aa12.47□□□□□ -0.41
COL4A6-209ENST00000545689 LILRA4P59901 499 aa12.47□□□□□ -0.41
COL4A6-209ENST00000545689 RD3Q7Z3Z2 195 aa12.47□□□□□ -0.41
COL4A6-209ENST00000545689 SMPD3Q9NY59 655 aaPredicted RBP12.47□□□□□ -0.41
COL4A6-209ENST00000545689 ZNF624Q9P2J8 865 aaPredicted RBP12.47□□□□□ -0.41
COL4A6-209ENST00000545689 TRPS1Q9UHF7 1281 aa12.47□□□□□ -0.41
COL4A6-209ENST00000545689 AP3D1O14617 1153 aa12.46□□□□□ -0.41
COL4A6-209ENST00000545689 ATG13O75143 517 aa12.46□□□□□ -0.41
COL4A6-209ENST00000545689 ELFN1P0C7U0 828 aa12.46□□□□□ -0.41
COL4A6-209ENST00000545689 SELPP16109 830 aa12.46□□□□□ -0.41
COL4A6-209ENST00000545689 IL12AP29459 219 aa12.46□□□□□ -0.41
COL4A6-209ENST00000545689 MAPK10P53779 464 aa12.46□□□□□ -0.41
COL4A6-209ENST00000545689 GPAT3Q53EU6 434 aa12.46□□□□□ -0.41
COL4A6-209ENST00000545689 GPR158Q5T848 1215 aa12.46□□□□□ -0.41
COL4A6-209ENST00000545689 SULT1C3Q6IMI6 304 aa12.46□□□□□ -0.41
COL4A6-209ENST00000545689 HEATR4Q86WZ0 1026 aa12.46□□□□□ -0.41
COL4A6-209ENST00000545689 CADM1Q9BY67 442 aaKnown RBP12.46□□□□□ -0.41
COL4A6-209ENST00000545689 GOLGA2P5Q9HBQ8 144 aa12.46□□□□□ -0.41
COL4A6-209ENST00000545689 ATXN10Q9UBB4 475 aa12.46□□□□□ -0.41
COL4A6-209ENST00000545689 EGFL7Q9UHF1 273 aa12.46□□□□□ -0.41
COL4A6-209ENST00000545689 SSR3Q9UNL2 185 aa12.46□□□□□ -0.41
COL4A6-209ENST00000545689 GRIN2DO15399 1336 aa12.46□□□□□ -0.41
COL4A6-209ENST00000545689 A0A1B0GVM2 712 aa12.46□□□□□ -0.41
COL4A6-209ENST00000545689 CCDC189A1A4V9 331 aa12.46□□□□□ -0.41
COL4A6-209ENST00000545689 TCAF2A6NFQ2 919 aa12.46□□□□□ -0.41
COL4A6-209ENST00000545689 A8MUI8 341 aa12.46□□□□□ -0.41
COL4A6-209ENST00000545689 TIPRLO75663 272 aa12.46□□□□□ -0.41
COL4A6-209ENST00000545689 MFN2O95140 757 aa12.46□□□□□ -0.41
COL4A6-209ENST00000545689 SLC25A14O95258 325 aaPredicted RBP12.46□□□□□ -0.41
COL4A6-209ENST00000545689 ASLP04424 464 aa12.46□□□□□ -0.41
COL4A6-209ENST00000545689 TPP2P29144 1249 aaPredicted RBP12.46□□□□□ -0.41
COL4A6-209ENST00000545689 GNA12Q03113 381 aa12.46□□□□□ -0.41
COL4A6-209ENST00000545689 AGMOQ6ZNB7 445 aa12.46□□□□□ -0.41
COL4A6-209ENST00000545689 LPGAT1Q92604 370 aa12.46□□□□□ -0.41
COL4A6-209ENST00000545689 CXorf40BQ96DE9 158 aa12.46□□□□□ -0.41
COL4A6-209ENST00000545689 EXOC2Q96KP1 924 aa12.46□□□□□ -0.41
COL4A6-209ENST00000545689 STK16O75716 305 aa12.46□□□□□ -0.41
COL4A6-209ENST00000545689 TRBC1P01850 177 aa12.46□□□□□ -0.41
COL4A6-209ENST00000545689 ESR1P03372 595 aa12.46□□□□□ -0.41
COL4A6-209ENST00000545689 PTX3P26022 381 aaPredicted RBP12.46□□□□□ -0.41
COL4A6-209ENST00000545689 KIR3DL1P43629 444 aa12.46□□□□□ -0.41
COL4A6-209ENST00000545689 DLG1Q12959 904 aa12.46□□□□□ -0.41
COL4A6-209ENST00000545689 TAF1AQ15573 450 aaPredicted RBP12.46□□□□□ -0.41
COL4A6-209ENST00000545689 SLC10A6Q3KNW5 377 aa12.46□□□□□ -0.41
COL4A6-209ENST00000545689 PPM1JQ5JR12 505 aa12.46□□□□□ -0.41
COL4A6-209ENST00000545689 TMEM63BQ5T3F8 832 aa12.46□□□□□ -0.41
COL4A6-209ENST00000545689 KRT74Q7RTS7 529 aa12.46□□□□□ -0.41
COL4A6-209ENST00000545689 ZNF384Q8TF68 577 aa12.46□□□□□ -0.41
COL4A6-209ENST00000545689 FCRL5Q96RD9 977 aa12.46□□□□□ -0.41
COL4A6-209ENST00000545689 RACGAP1Q9H0H5 632 aa12.46□□□□□ -0.41
COL4A6-209ENST00000545689 MIOSQ9NXC5 875 aa12.46□□□□□ -0.41
COL4A6-209ENST00000545689 GNEQ9Y223 722 aaKnown RBP12.46□□□□□ -0.41
COL4A6-209ENST00000545689 TRIM17Q9Y577 477 aa12.46□□□□□ -0.41
COL4A6-209ENST00000545689 ELOVL7A1L3X0 281 aa12.46□□□□□ -0.42
COL4A6-209ENST00000545689 LGR5O75473 907 aa12.46□□□□□ -0.42
COL4A6-209ENST00000545689 OR6A2O95222 327 aa12.46□□□□□ -0.42
COL4A6-209ENST00000545689 PRPS2P11908 318 aa12.46□□□□□ -0.42
COL4A6-209ENST00000545689 CORO1AP31146 461 aaKnown RBP12.46□□□□□ -0.42
COL4A6-209ENST00000545689 ELP6Q0PNE2 266 aa12.46□□□□□ -0.42
COL4A6-209ENST00000545689 ITGA7Q13683 1181 aa12.46□□□□□ -0.42
COL4A6-209ENST00000545689 SERPINA13PQ6UXR4 307 aa12.46□□□□□ -0.42
COL4A6-209ENST00000545689 DAW1Q8N136 415 aa12.46□□□□□ -0.42
COL4A6-209ENST00000545689 GLB1L3Q8NCI6 653 aaPredicted RBP12.46□□□□□ -0.42
COL4A6-209ENST00000545689 ZNF671Q8TAW3 534 aa12.46□□□□□ -0.42
COL4A6-209ENST00000545689 PCED1BQ96HM7 432 aa12.46□□□□□ -0.42
COL4A6-209ENST00000545689 DPEP3Q9H4B8 488 aa12.46□□□□□ -0.42
COL4A6-209ENST00000545689 C3orf14Q9HBI5 128 aa12.46□□□□□ -0.42
COL4A6-209ENST00000545689 AASDHPPTQ9NRN7 309 aa12.46□□□□□ -0.42
COL4A6-209ENST00000545689 FBXO10Q9UK96 956 aa12.46□□□□□ -0.42
COL4A6-209ENST00000545689 MRPS23Q9Y3D9 190 aaKnown RBP12.46□□□□□ -0.42
COL4A6-209ENST00000545689 KLF11O14901 512 aa12.46□□□□□ -0.42
COL4A6-209ENST00000545689 SH3BGRLO75368 114 aa12.46□□□□□ -0.42
COL4A6-209ENST00000545689 CCNYL3P0C7X3 344 aa12.46□□□□□ -0.42
COL4A6-209ENST00000545689 MTHFRP42898 656 aa12.46□□□□□ -0.42
COL4A6-209ENST00000545689 GPD2P43304 727 aa12.46□□□□□ -0.42
COL4A6-209ENST00000545689 MPP1Q00013 466 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms