RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 ARHGAP12Q8IWW6 846 aa9.3□□□□□ -0.92
CHD4-212ENST00000545083 TP53INP2Q8IXH6 220 aa9.3□□□□□ -0.92
CHD4-212ENST00000545083 RBMXL3Q8N7X1 1067 aaKnown RBP9.3□□□□□ -0.92
CHD4-212ENST00000545083 SCAMP4Q969E2 229 aa9.3□□□□□ -0.92
CHD4-212ENST00000545083 RANBP9Q96S59 729 aa9.3□□□□□ -0.92
CHD4-212ENST00000545083 BRD8Q9H0E9 1235 aa9.3□□□□□ -0.92
CHD4-212ENST00000545083 ING2Q9H160 280 aa9.3□□□□□ -0.92
CHD4-212ENST00000545083 SLAMF7Q9NQ25 335 aa9.3□□□□□ -0.92
CHD4-212ENST00000545083 GPATCH2LQ9NWQ4 482 aa9.3□□□□□ -0.92
CHD4-212ENST00000545083 KCTD5Q9NXV2 234 aa9.3□□□□□ -0.92
CHD4-212ENST00000545083 HOOK1Q9UJC3 728 aaKnown RBP9.3□□□□□ -0.92
CHD4-212ENST00000545083 PADI1Q9ULC6 663 aa9.3□□□□□ -0.92
CHD4-212ENST00000545083 FZD10Q9ULW2 581 aa9.3□□□□□ -0.92
CHD4-212ENST00000545083 KCNK6Q9Y257 313 aa9.3□□□□□ -0.92
CHD4-212ENST00000545083 SLC5A6Q9Y289 635 aa9.3□□□□□ -0.92
CHD4-212ENST00000545083 DIDO1Q9BTC0 2240 aaKnown RBP9.29□□□□□ -0.92
CHD4-212ENST00000545083 ARHGAP42A6NI28 874 aa9.29□□□□□ -0.92
CHD4-212ENST00000545083 LILRA5A6NI73 299 aa9.29□□□□□ -0.92
CHD4-212ENST00000545083 PSMD11O00231 422 aa9.29□□□□□ -0.92
CHD4-212ENST00000545083 FGF10O15520 208 aaPredicted RBP9.29□□□□□ -0.92
CHD4-212ENST00000545083 SNX2O60749 519 aa9.29□□□□□ -0.92
CHD4-212ENST00000545083 FGFR1OPO95684 399 aaKnown RBP9.29□□□□□ -0.92
CHD4-212ENST00000545083 CCNYL3P0C7X3 344 aa9.29□□□□□ -0.92
CHD4-212ENST00000545083 FGF5P12034 268 aa9.29□□□□□ -0.92
CHD4-212ENST00000545083 KRT3P12035 628 aa9.29□□□□□ -0.92
CHD4-212ENST00000545083 TYRP1P17643 537 aa9.29□□□□□ -0.92
CHD4-212ENST00000545083 CHRNB2P17787 502 aa9.29□□□□□ -0.92
CHD4-212ENST00000545083 CTPS1P17812 591 aa9.29□□□□□ -0.92
CHD4-212ENST00000545083 GPD1P21695 349 aa9.29□□□□□ -0.92
CHD4-212ENST00000545083 PTGIRP43119 386 aa9.29□□□□□ -0.92
CHD4-212ENST00000545083 AP1S1P61966 158 aa9.29□□□□□ -0.92
CHD4-212ENST00000545083 UBE2IP63279 158 aaKnown RBP9.29□□□□□ -0.92
CHD4-212ENST00000545083 FMO1Q01740 532 aa9.29□□□□□ -0.92
CHD4-212ENST00000545083 IL11RAQ14626 422 aa9.29□□□□□ -0.92
CHD4-212ENST00000545083 CHRNA6Q15825 494 aa9.29□□□□□ -0.92
CHD4-212ENST00000545083 CHST15Q7LFX5 561 aaPredicted RBP9.29□□□□□ -0.92
CHD4-212ENST00000545083 SLC9B2Q86UD5 537 aa9.29□□□□□ -0.92
CHD4-212ENST00000545083 PLXDC1Q8IUK5 500 aa9.29□□□□□ -0.92
CHD4-212ENST00000545083 ELOA2Q8IYF1 753 aaPredicted RBP9.29□□□□□ -0.92
CHD4-212ENST00000545083 NPWQ8N729 165 aa9.29□□□□□ -0.92
CHD4-212ENST00000545083 MARVELD3Q96A59 401 aa9.29□□□□□ -0.92
CHD4-212ENST00000545083 SH3KBP1Q96B97 665 aa9.29□□□□□ -0.92
CHD4-212ENST00000545083 AP2M1Q96CW1 435 aa9.29□□□□□ -0.92
CHD4-212ENST00000545083 SNRNP40Q96DI7 357 aaKnown RBP9.29□□□□□ -0.92
CHD4-212ENST00000545083 COX14Q96I36 57 aa9.29□□□□□ -0.92
CHD4-212ENST00000545083 C5orf34Q96MH7 638 aa9.29□□□□□ -0.92
CHD4-212ENST00000545083 TGM7Q96PF1 710 aa9.29□□□□□ -0.92
CHD4-212ENST00000545083 PSKH2Q96QS6 385 aa9.29□□□□□ -0.92
CHD4-212ENST00000545083 MCCC1Q96RQ3 725 aaPredicted RBP9.29□□□□□ -0.92
CHD4-212ENST00000545083 NUDT9Q9BW91 350 aa9.29□□□□□ -0.92
CHD4-212ENST00000545083 NAA15Q9BXJ9 866 aaKnown RBP9.29□□□□□ -0.92
CHD4-212ENST00000545083 UNKQ9C0B0 810 aaKnown RBP9.29□□□□□ -0.92
CHD4-212ENST00000545083 EPB41L1Q9H4G0 881 aa9.29□□□□□ -0.92
CHD4-212ENST00000545083 STN1Q9H668 368 aaKnown RBP9.29□□□□□ -0.92
CHD4-212ENST00000545083 SP110Q9HB58 689 aa9.29□□□□□ -0.92
CHD4-212ENST00000545083 ACSS2Q9NR19 701 aa9.29□□□□□ -0.92
CHD4-212ENST00000545083 ASF1BQ9NVP2 202 aa9.29□□□□□ -0.92
CHD4-212ENST00000545083 SCHIP1Q9P0W5 487 aaPredicted RBP9.29□□□□□ -0.92
CHD4-212ENST00000545083 KIAA1468Q9P260 1216 aa9.29□□□□□ -0.92
CHD4-212ENST00000545083 CPNE7Q9UBL6 633 aa9.29□□□□□ -0.92
CHD4-212ENST00000545083 CNOT8Q9UFF9 292 aaKnown RBP9.29□□□□□ -0.92
CHD4-212ENST00000545083 ZNHIT2Q9UHR6 403 aa9.29□□□□□ -0.92
CHD4-212ENST00000545083 NOCTQ9UK39 431 aaKnown RBP9.29□□□□□ -0.92
CHD4-212ENST00000545083 SLC30A1Q9Y6M5 507 aa9.29□□□□□ -0.92
CHD4-212ENST00000545083 CROCCQ5TZA2 2017 aa9.29□□□□□ -0.92
CHD4-212ENST00000545083 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.28□□□□□ -0.92
CHD4-212ENST00000545083 ARHGAP10A1A4S6 786 aa9.28□□□□□ -0.92
CHD4-212ENST00000545083 C21orf140B9A014 251 aa9.28□□□□□ -0.92
CHD4-212ENST00000545083 DFFAO00273 331 aa9.28□□□□□ -0.92
CHD4-212ENST00000545083 DPM1O60762 260 aa9.28□□□□□ -0.92
CHD4-212ENST00000545083 SOCS5O75159 536 aa9.28□□□□□ -0.92
CHD4-212ENST00000545083 CEACAM4O75871 244 aa9.28□□□□□ -0.92
CHD4-212ENST00000545083 ASMTLO95671 621 aa9.28□□□□□ -0.92
CHD4-212ENST00000545083 ATP1A1P05023 1023 aaKnown RBP9.28□□□□□ -0.92
CHD4-212ENST00000545083 CYP2A6P11509 494 aaPredicted RBP9.28□□□□□ -0.92
CHD4-212ENST00000545083 ACP5P13686 325 aa9.28□□□□□ -0.92
CHD4-212ENST00000545083 F3P13726 295 aa9.28□□□□□ -0.92
CHD4-212ENST00000545083 PTPN4P29074 926 aa9.28□□□□□ -0.92
CHD4-212ENST00000545083 TPI1P60174 286 aa9.28□□□□□ -0.92
CHD4-212ENST00000545083 SLC10A7Q0GE19 358 aa9.28□□□□□ -0.92
CHD4-212ENST00000545083 LBRQ14739 615 aaKnown RBP9.28□□□□□ -0.92
CHD4-212ENST00000545083 CA9Q16790 459 aa9.28□□□□□ -0.92
CHD4-212ENST00000545083 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.28□□□□□ -0.92
CHD4-212ENST00000545083 ZRANB3Q5FWF4 1079 aa9.28□□□□□ -0.92
CHD4-212ENST00000545083 KLHDC7AQ5VTJ3 777 aa9.28□□□□□ -0.92
CHD4-212ENST00000545083 PGBD5Q8N414 524 aa9.28□□□□□ -0.92
CHD4-212ENST00000545083 LZTR1Q8N653 840 aa9.28□□□□□ -0.92
CHD4-212ENST00000545083 TTC13Q8NBP0 860 aa9.28□□□□□ -0.92
CHD4-212ENST00000545083 FDCSPQ8NFU4 85 aa9.28□□□□□ -0.92
CHD4-212ENST00000545083 THAP4Q8WY91 577 aa9.28□□□□□ -0.92
CHD4-212ENST00000545083 RSC1A1Q92681 617 aa9.28□□□□□ -0.92
CHD4-212ENST00000545083 PNPLA2Q96AD5 504 aa9.28□□□□□ -0.92
CHD4-212ENST00000545083 SCRN2Q96FV2 425 aa9.28□□□□□ -0.92
CHD4-212ENST00000545083 PLEKHG4BQ96PX9 1271 aa9.28□□□□□ -0.92
CHD4-212ENST00000545083 PCDHB18PQ96TA0 734 aa9.28□□□□□ -0.92
CHD4-212ENST00000545083 HERPUD2Q9BSE4 406 aa9.28□□□□□ -0.92
CHD4-212ENST00000545083 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.28□□□□□ -0.92
CHD4-212ENST00000545083 NOD2Q9HC29 1040 aa9.28□□□□□ -0.92
CHD4-212ENST00000545083 RWDD2AQ9UIY3 292 aa9.28□□□□□ -0.92
CHD4-212ENST00000545083 CNOT6Q9ULM6 557 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms