RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 TEX101Q9BY14 249 aa14.38□□□□□ -0.11
TNFRSF1A-216ENST00000543995 GDF3Q9NR23 364 aa14.38□□□□□ -0.11
TNFRSF1A-216ENST00000543995 TREX1Q9NSU2 369 aa14.38□□□□□ -0.11
TNFRSF1A-216ENST00000543995 SEMA4GQ9NTN9 838 aa14.38□□□□□ -0.11
TNFRSF1A-216ENST00000543995 SNX11Q9Y5W9 270 aa14.38□□□□□ -0.11
TNFRSF1A-216ENST00000543995 RPS6KL1Q9Y6S9 549 aa14.38□□□□□ -0.11
TNFRSF1A-216ENST00000543995 VPS13AQ96RL7 3174 aa14.38□□□□□ -0.11
TNFRSF1A-216ENST00000543995 FAM237BA0A1B0GVD1 139 aa14.37□□□□□ -0.11
TNFRSF1A-216ENST00000543995 H7C0S8 307 aa14.37□□□□□ -0.11
TNFRSF1A-216ENST00000543995 GAPDHSO14556 408 aaPredicted RBP14.37□□□□□ -0.11
TNFRSF1A-216ENST00000543995 ARHGAP33O14559 1287 aa14.37□□□□□ -0.11
TNFRSF1A-216ENST00000543995 GPR39O43194 453 aa14.37□□□□□ -0.11
TNFRSF1A-216ENST00000543995 UGT1A9O60656 530 aa14.37□□□□□ -0.11
TNFRSF1A-216ENST00000543995 ASMTLO95671 621 aa14.37□□□□□ -0.11
TNFRSF1A-216ENST00000543995 UGT1A6P19224 532 aa14.37□□□□□ -0.11
TNFRSF1A-216ENST00000543995 UGT1A1P22309 533 aa14.37□□□□□ -0.11
TNFRSF1A-216ENST00000543995 UGT1A4P22310 534 aa14.37□□□□□ -0.11
TNFRSF1A-216ENST00000543995 UGT1A3P35503 534 aa14.37□□□□□ -0.11
TNFRSF1A-216ENST00000543995 UGT1A5P35504 534 aa14.37□□□□□ -0.11
TNFRSF1A-216ENST00000543995 ELK3P41970 407 aa14.37□□□□□ -0.11
TNFRSF1A-216ENST00000543995 NXPH1P58417 271 aa14.37□□□□□ -0.11
TNFRSF1A-216ENST00000543995 KIAA1024LP59773 190 aa14.37□□□□□ -0.11
TNFRSF1A-216ENST00000543995 XIAPP98170 497 aa14.37□□□□□ -0.11
TNFRSF1A-216ENST00000543995 SF3A2Q15428 464 aaKnown RBP14.37□□□□□ -0.11
TNFRSF1A-216ENST00000543995 DOK6Q6PKX4 331 aa14.37□□□□□ -0.11
TNFRSF1A-216ENST00000543995 AFTPHQ6ULP2 937 aa14.37□□□□□ -0.11
TNFRSF1A-216ENST00000543995 IL27RAQ6UWB1 636 aa14.37□□□□□ -0.11
TNFRSF1A-216ENST00000543995 ENPP7Q6UWV6 458 aa14.37□□□□□ -0.11
TNFRSF1A-216ENST00000543995 ZDHHC24Q6UX98 284 aa14.37□□□□□ -0.11
TNFRSF1A-216ENST00000543995 MACC1Q6ZN28 852 aa14.37□□□□□ -0.11
TNFRSF1A-216ENST00000543995 SNX20Q7Z614 316 aa14.37□□□□□ -0.11
TNFRSF1A-216ENST00000543995 TRIM74Q86UV6 250 aa14.37□□□□□ -0.11
TNFRSF1A-216ENST00000543995 CCDC25Q86WR0 208 aa14.37□□□□□ -0.11
TNFRSF1A-216ENST00000543995 SPATS2Q86XZ4 545 aaKnown RBP14.37□□□□□ -0.11
TNFRSF1A-216ENST00000543995 PHYKPLQ8IUZ5 450 aa14.37□□□□□ -0.11
TNFRSF1A-216ENST00000543995 IFT20Q8IY31 132 aa14.37□□□□□ -0.11
TNFRSF1A-216ENST00000543995 AGGF1Q8N302 714 aaeCLIP14.37□□□□□ -0.11
TNFRSF1A-216ENST00000543995 DTX3LQ8TDB6 740 aa14.37□□□□□ -0.11
TNFRSF1A-216ENST00000543995 GLYATL1Q969I3 302 aa14.37□□□□□ -0.11
TNFRSF1A-216ENST00000543995 ZNF669Q96BR6 464 aaPredicted RBP14.37□□□□□ -0.11
TNFRSF1A-216ENST00000543995 TRIM56Q9BRZ2 755 aaKnown RBP14.37□□□□□ -0.11
TNFRSF1A-216ENST00000543995 GTPBP2Q9BX10 602 aaKnown RBP14.37□□□□□ -0.11
TNFRSF1A-216ENST00000543995 FAM96AQ9H5X1 160 aa14.37□□□□□ -0.11
TNFRSF1A-216ENST00000543995 UGT1A7Q9HAW7 530 aa14.37□□□□□ -0.11
TNFRSF1A-216ENST00000543995 UGT1A10Q9HAW8 530 aa14.37□□□□□ -0.11
TNFRSF1A-216ENST00000543995 UGT1A8Q9HAW9 530 aa14.37□□□□□ -0.11
TNFRSF1A-216ENST00000543995 MTRF1LQ9UGC7 380 aaKnown RBP14.37□□□□□ -0.11
TNFRSF1A-216ENST00000543995 CRLS1Q9UJA2 301 aa14.37□□□□□ -0.11
TNFRSF1A-216ENST00000543995 MOSPD1Q9UJG1 213 aa14.37□□□□□ -0.11
TNFRSF1A-216ENST00000543995 CHMP2BQ9UQN3 213 aa14.37□□□□□ -0.11
TNFRSF1A-216ENST00000543995 MYO15AQ9UKN7 3530 aa14.37□□□□□ -0.11
TNFRSF1A-216ENST00000543995 PLXNB3Q9ULL4 1909 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 SPTY2D1-AS1A0A0U1RR47 76 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 CCDC162PA2VCL2 907 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 OR51F1A6NGY5 319 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 LRP3O75074 770 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 USP1O94782 785 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 POLBP06746 335 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 HOXC4P09017 264 aaPredicted RBP14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 ENGP17813 658 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 PGAM1P18669 254 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 CTSKP43235 329 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 ATXN3P54252 364 aaPredicted RBP14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 ACVR1Q04771 509 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 NFATC2Q13469 925 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 CSRP2Q16527 193 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 TPRG1LQ5T0D9 272 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 TAS2R42Q7RTR8 314 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 PARGQ86W56 976 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 ANKMY2Q8IV38 441 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 ZBED8Q8IZ13 594 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 OTUD6BQ8N6M0 293 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 OR56A4Q8NGH8 313 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 BTN2A2Q8WVV5 523 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 LRRC39Q96DD0 335 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 CFAP36Q96G28 342 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 WDR92Q96MX6 357 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 VPS35Q96QK1 796 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 EBNA1BP2Q99848 306 aaKnown RBP14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 NAT9Q9BTE0 207 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 FAM129AQ9BZQ8 928 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 ZDHHC5Q9C0B5 715 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 ARFGAP3Q9NP61 516 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 SAYSD1Q9NPB0 183 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 GPR27Q9NS67 375 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 DNAJC28Q9NX36 388 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 KLQ9UEF7 1012 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 CNOT6Q9ULM6 557 aaKnown RBP14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 TMEM98Q9Y2Y6 226 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 PCDH15Q96QU1 1955 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 BHMG1C9JSJ3 638 aaPredicted RBP14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 GOT2P00505 430 aaKnown RBP14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 PSMA3P25788 255 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 TUBB4BP68371 445 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 BNC1Q01954 994 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 CACNG1Q06432 222 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 CUL1Q13616 776 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 FZD2Q14332 565 aa14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 SMAD1Q15797 465 aaKnown RBP14.36□□□□□ -0.11
TNFRSF1A-216ENST00000543995 ANKRD20A4Q4UJ75 823 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms