RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 MACC1Q6ZN28 852 aa13.53□□□□□ -0.24
SP140-213ENST00000543928 PRR23CQ6ZRP0 262 aa13.53□□□□□ -0.24
SP140-213ENST00000543928 MICALCLQ6ZW33 695 aa13.53□□□□□ -0.24
SP140-213ENST00000543928 TRIM74Q86UV6 250 aa13.53□□□□□ -0.24
SP140-213ENST00000543928 PDIK1LQ8N165 341 aa13.53□□□□□ -0.24
SP140-213ENST00000543928 AGGF1Q8N302 714 aaeCLIP13.53□□□□□ -0.24
SP140-213ENST00000543928 OR13J1Q8NGT2 312 aa13.53□□□□□ -0.24
SP140-213ENST00000543928 OR2I1PQ8NGU4 316 aa13.53□□□□□ -0.24
SP140-213ENST00000543928 ZNF398Q8TD17 642 aa13.53□□□□□ -0.24
SP140-213ENST00000543928 PTCD2Q8WV60 388 aaKnown RBP13.53□□□□□ -0.24
SP140-213ENST00000543928 CDKN2AIPNLQ96HQ2 116 aa13.53□□□□□ -0.24
SP140-213ENST00000543928 HIC2Q96JB3 615 aa13.53□□□□□ -0.24
SP140-213ENST00000543928 SIGLEC10Q96LC7 697 aa13.53□□□□□ -0.24
SP140-213ENST00000543928 TBATAQ96M53 351 aa13.53□□□□□ -0.24
SP140-213ENST00000543928 WDR92Q96MX6 357 aa13.53□□□□□ -0.24
SP140-213ENST00000543928 KIFC1Q9BW19 673 aa13.53□□□□□ -0.24
SP140-213ENST00000543928 ASB8Q9H765 288 aa13.53□□□□□ -0.24
SP140-213ENST00000543928 SUDS3Q9H7L9 328 aaPredicted RBP13.53□□□□□ -0.24
SP140-213ENST00000543928 UGT1A7Q9HAW7 530 aa13.53□□□□□ -0.24
SP140-213ENST00000543928 UGT1A10Q9HAW8 530 aa13.53□□□□□ -0.24
SP140-213ENST00000543928 UGT1A8Q9HAW9 530 aa13.53□□□□□ -0.24
SP140-213ENST00000543928 MRM3Q9HC36 420 aaKnown RBP13.53□□□□□ -0.24
SP140-213ENST00000543928 SAMD15Q9P1V8 674 aa13.53□□□□□ -0.24
SP140-213ENST00000543928 DMGDHQ9UI17 866 aaKnown RBP13.53□□□□□ -0.24
SP140-213ENST00000543928 APPL1Q9UKG1 709 aa13.53□□□□□ -0.24
SP140-213ENST00000543928 TMPRSS11EQ9UL52 423 aa13.53□□□□□ -0.24
SP140-213ENST00000543928 CNOT6Q9ULM6 557 aaKnown RBP13.53□□□□□ -0.24
SP140-213ENST00000543928 SOX13Q9UN79 622 aa13.53□□□□□ -0.24
SP140-213ENST00000543928 ZNF106Q9H2Y7 1883 aaKnown RBP13.53□□□□□ -0.24
SP140-213ENST00000543928 PTPRZ1P23471 2315 aaPredicted RBP13.52□□□□□ -0.24
SP140-213ENST00000543928 CCDC162PA2VCL2 907 aa13.52□□□□□ -0.25
SP140-213ENST00000543928 TMEM202A6NGA9 273 aa13.52□□□□□ -0.25
SP140-213ENST00000543928 H7C0S8 307 aa13.52□□□□□ -0.25
SP140-213ENST00000543928 BANF1O75531 89 aa13.52□□□□□ -0.25
SP140-213ENST00000543928 SRP72O76094 671 aaKnown RBP13.52□□□□□ -0.25
SP140-213ENST00000543928 CER1O95813 267 aa13.52□□□□□ -0.25
SP140-213ENST00000543928 KELP23276 732 aa13.52□□□□□ -0.25
SP140-213ENST00000543928 NMBRP28336 390 aa13.52□□□□□ -0.25
SP140-213ENST00000543928 ATXN3P54252 364 aaPredicted RBP13.52□□□□□ -0.25
SP140-213ENST00000543928 PLTPP55058 493 aa13.52□□□□□ -0.25
SP140-213ENST00000543928 ARL4CP56559 192 aa13.52□□□□□ -0.25
SP140-213ENST00000543928 ACVR1Q04771 509 aa13.52□□□□□ -0.25
SP140-213ENST00000543928 DHX9Q08211 1270 aaKnown RBP13.52□□□□□ -0.25
SP140-213ENST00000543928 EIF2B5Q13144 721 aaKnown RBP13.52□□□□□ -0.25
SP140-213ENST00000543928 ITGA9Q13797 1035 aa13.52□□□□□ -0.25
SP140-213ENST00000543928 HIF1AQ16665 826 aa13.52□□□□□ -0.25
SP140-213ENST00000543928 BBS9Q3SYG4 887 aa13.52□□□□□ -0.25
SP140-213ENST00000543928 AASDHQ4L235 1098 aaPredicted RBP13.52□□□□□ -0.25
SP140-213ENST00000543928 MSS51Q4VC12 460 aa13.52□□□□□ -0.25
SP140-213ENST00000543928 ZNF542PQ5EBM4 170 aa13.52□□□□□ -0.25
SP140-213ENST00000543928 DNAJC21Q5F1R6 531 aaKnown RBP13.52□□□□□ -0.25
SP140-213ENST00000543928 ARMC3Q5W041 872 aa13.52□□□□□ -0.25
SP140-213ENST00000543928 DOK6Q6PKX4 331 aa13.52□□□□□ -0.25
SP140-213ENST00000543928 ENPP7Q6UWV6 458 aa13.52□□□□□ -0.25
SP140-213ENST00000543928 CES3Q6UWW8 571 aa13.52□□□□□ -0.25
SP140-213ENST00000543928 PARGQ86W56 976 aa13.52□□□□□ -0.25
SP140-213ENST00000543928 GPR161Q8N6U8 529 aaKnown RBP13.52□□□□□ -0.25
SP140-213ENST00000543928 BTN2A2Q8WVV5 523 aa13.52□□□□□ -0.25
SP140-213ENST00000543928 SEC14L1Q92503 715 aa13.52□□□□□ -0.25
SP140-213ENST00000543928 PEX13Q92968 403 aa13.52□□□□□ -0.25
SP140-213ENST00000543928 ART4Q93070 314 aa13.52□□□□□ -0.25
SP140-213ENST00000543928 GLYATL1Q969I3 302 aa13.52□□□□□ -0.25
SP140-213ENST00000543928 HDAC10Q969S8 669 aa13.52□□□□□ -0.25
SP140-213ENST00000543928 MFSD3Q96ES6 412 aa13.52□□□□□ -0.25
SP140-213ENST00000543928 COX14Q96I36 57 aa13.52□□□□□ -0.25
SP140-213ENST00000543928 VPS35Q96QK1 796 aa13.52□□□□□ -0.25
SP140-213ENST00000543928 TRIM56Q9BRZ2 755 aaKnown RBP13.52□□□□□ -0.25
SP140-213ENST00000543928 GAREM1Q9H706 876 aa13.52□□□□□ -0.25
SP140-213ENST00000543928 ERVMER34-1Q9H9K5 563 aa13.52□□□□□ -0.25
SP140-213ENST00000543928 IL21RQ9HBE5 538 aa13.52□□□□□ -0.25
SP140-213ENST00000543928 EPB41L5Q9HCM4 733 aa13.52□□□□□ -0.25
SP140-213ENST00000543928 ARFGAP3Q9NP61 516 aa13.52□□□□□ -0.25
SP140-213ENST00000543928 RXFP3Q9NSD7 469 aa13.52□□□□□ -0.25
SP140-213ENST00000543928 TREX1Q9NSU2 369 aa13.52□□□□□ -0.25
SP140-213ENST00000543928 KLQ9UEF7 1012 aa13.52□□□□□ -0.25
SP140-213ENST00000543928 TMEM98Q9Y2Y6 226 aa13.52□□□□□ -0.25
SP140-213ENST00000543928 MAD1L1Q9Y6D9 718 aa13.52□□□□□ -0.25
SP140-213ENST00000543928 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.52□□□□□ -0.25
SP140-213ENST00000543928 SLC30A1Q9Y6M5 507 aa13.52□□□□□ -0.25
SP140-213ENST00000543928 TMEM131Q92545 1883 aa13.52□□□□□ -0.25
SP140-213ENST00000543928 GVINP1Q7Z2Y8 2422 aa13.52□□□□□ -0.25
SP140-213ENST00000543928 CABIN1Q9Y6J0 2220 aa13.51□□□□□ -0.25
SP140-213ENST00000543928 FAM237BA0A1B0GVD1 139 aa13.51□□□□□ -0.25
SP140-213ENST00000543928 MAGEB16A2A368 324 aa13.51□□□□□ -0.25
SP140-213ENST00000543928 OR51F1A6NGY5 319 aa13.51□□□□□ -0.25
SP140-213ENST00000543928 BHMG1C9JSJ3 638 aaPredicted RBP13.51□□□□□ -0.25
SP140-213ENST00000543928 FOXD2O60548 495 aaPredicted RBP13.51□□□□□ -0.25
SP140-213ENST00000543928 SLC25A14O95258 325 aaPredicted RBP13.51□□□□□ -0.25
SP140-213ENST00000543928 ASMTLO95671 621 aa13.51□□□□□ -0.25
SP140-213ENST00000543928 ITGALP20701 1170 aa13.51□□□□□ -0.25
SP140-213ENST00000543928 CA5AP35218 305 aa13.51□□□□□ -0.25
SP140-213ENST00000543928 POLD2P49005 469 aa13.51□□□□□ -0.25
SP140-213ENST00000543928 PRAMEP78395 509 aa13.51□□□□□ -0.25
SP140-213ENST00000543928 CAV1Q03135 178 aa13.51□□□□□ -0.25
SP140-213ENST00000543928 NFATC2Q13469 925 aa13.51□□□□□ -0.25
SP140-213ENST00000543928 ZNF423Q2M1K9 1284 aa13.51□□□□□ -0.25
SP140-213ENST00000543928 ALG11Q2TAA5 492 aa13.51□□□□□ -0.25
SP140-213ENST00000543928 ZRANB3Q5FWF4 1079 aa13.51□□□□□ -0.25
SP140-213ENST00000543928 KCTD16Q68DU8 428 aa13.51□□□□□ -0.25
SP140-213ENST00000543928 ZDHHC24Q6UX98 284 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms