RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 FZD3Q9NPG1 666 aa11.82□□□□□ -0.52
DDB1-223ENST00000543658 IL26Q9NPH9 171 aa11.82□□□□□ -0.52
DDB1-223ENST00000543658 AASDHPPTQ9NRN7 309 aa11.82□□□□□ -0.52
DDB1-223ENST00000543658 PHPT1Q9NRX4 125 aaPredicted RBP11.82□□□□□ -0.52
DDB1-223ENST00000543658 MBD1Q9UIS9 605 aaPredicted RBP11.82□□□□□ -0.52
DDB1-223ENST00000543658 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.82□□□□□ -0.52
DDB1-223ENST00000543658 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.81□□□□□ -0.52
DDB1-223ENST00000543658 A0A1W2PPC4 97 aa11.81□□□□□ -0.52
DDB1-223ENST00000543658 A6NNZ2 444 aa11.81□□□□□ -0.52
DDB1-223ENST00000543658 METTL12A8MUP2 240 aa11.81□□□□□ -0.52
DDB1-223ENST00000543658 CFAP99D6REC4 459 aa11.81□□□□□ -0.52
DDB1-223ENST00000543658 F8W8V4 182 aa11.81□□□□□ -0.52
DDB1-223ENST00000543658 CACNB4O00305 520 aaPredicted RBP11.81□□□□□ -0.52
DDB1-223ENST00000543658 INPP4BO15327 924 aa11.81□□□□□ -0.52
DDB1-223ENST00000543658 LATO43561 262 aa11.81□□□□□ -0.52
DDB1-223ENST00000543658 SLC25A14O95258 325 aaPredicted RBP11.81□□□□□ -0.52
DDB1-223ENST00000543658 SP9P0CG40 484 aa11.81□□□□□ -0.52
DDB1-223ENST00000543658 GM2AP17900 193 aa11.81□□□□□ -0.52
DDB1-223ENST00000543658 BCKDHBP21953 392 aa11.81□□□□□ -0.52
DDB1-223ENST00000543658 PSMA3P25788 255 aa11.81□□□□□ -0.52
DDB1-223ENST00000543658 FOXN2P32314 431 aa11.81□□□□□ -0.52
DDB1-223ENST00000543658 ARCN1P48444 511 aaKnown RBP11.81□□□□□ -0.52
DDB1-223ENST00000543658 DHPSP49366 369 aaPredicted RBP11.81□□□□□ -0.52
DDB1-223ENST00000543658 XIAPP98170 497 aa11.81□□□□□ -0.52
DDB1-223ENST00000543658 GTF2H3Q13889 308 aa11.81□□□□□ -0.52
DDB1-223ENST00000543658 FGL2Q14314 439 aa11.81□□□□□ -0.52
DDB1-223ENST00000543658 SLC29A2Q14542 456 aa11.81□□□□□ -0.52
DDB1-223ENST00000543658 STAT4Q14765 748 aa11.81□□□□□ -0.52
DDB1-223ENST00000543658 UAP1Q16222 522 aaPredicted RBP11.81□□□□□ -0.52
DDB1-223ENST00000543658 WSCD2Q2TBF2 565 aa11.81□□□□□ -0.52
DDB1-223ENST00000543658 LDLRAP1Q5SW96 308 aa11.81□□□□□ -0.52
DDB1-223ENST00000543658 PNCKQ6P2M8 343 aa11.81□□□□□ -0.52
DDB1-223ENST00000543658 TRMT10BQ6PF06 316 aaKnown RBP11.81□□□□□ -0.52
DDB1-223ENST00000543658 ZC3H14Q6PJT7 736 aaKnown RBP11.81□□□□□ -0.52
DDB1-223ENST00000543658 CYS1Q717R9 158 aa11.81□□□□□ -0.52
DDB1-223ENST00000543658 ARMCX6Q7L4S7 300 aa11.81□□□□□ -0.52
DDB1-223ENST00000543658 NLRP8Q86W28 1048 aa11.81□□□□□ -0.52
DDB1-223ENST00000543658 TMEFF1Q8IYR6 380 aa11.81□□□□□ -0.52
DDB1-223ENST00000543658 MAML2Q8IZL2 1156 aaPredicted RBP11.81□□□□□ -0.52
DDB1-223ENST00000543658 PPM1NQ8N819 430 aa11.81□□□□□ -0.52
DDB1-223ENST00000543658 FAM174AQ8TBP5 190 aa11.81□□□□□ -0.52
DDB1-223ENST00000543658 HEXDCQ8WVB3 486 aa11.81□□□□□ -0.52
DDB1-223ENST00000543658 SGSM3Q96HU1 749 aa11.81□□□□□ -0.52
DDB1-223ENST00000543658 LENG8Q96PV6 779 aaPredicted RBP11.81□□□□□ -0.52
DDB1-223ENST00000543658 VPS35Q96QK1 796 aa11.81□□□□□ -0.52
DDB1-223ENST00000543658 PRRX2Q99811 253 aa11.81□□□□□ -0.52
DDB1-223ENST00000543658 MIR1-1HGQ9H1L0 117 aa11.81□□□□□ -0.52
DDB1-223ENST00000543658 CCDC68Q9H2F9 335 aa11.81□□□□□ -0.52
DDB1-223ENST00000543658 FAM96AQ9H5X1 160 aa11.81□□□□□ -0.52
DDB1-223ENST00000543658 ACSS3Q9H6R3 686 aa11.81□□□□□ -0.52
DDB1-223ENST00000543658 PCDHGA2Q9Y5H1 932 aa11.81□□□□□ -0.52
DDB1-223ENST00000543658 TTC28Q96AY4 2481 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 ZFC3H1O60293 1989 aaKnown RBP11.8□□□□□ -0.52
DDB1-223ENST00000543658 UBA6A0AVT1 1052 aaPredicted RBP11.8□□□□□ -0.52
DDB1-223ENST00000543658 FAM159BA6NKW6 160 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 POC1B-GALNT4F8VUJ3 575 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 TOR1BO14657 336 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 UGT1A9O60656 530 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 ASMTLO95671 621 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 IGHV4-34P06331 123 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 INHBAP08476 426 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 H2AFXP16104 143 aaPredicted RBP11.8□□□□□ -0.52
DDB1-223ENST00000543658 ZNF7P17097 686 aaPredicted RBP11.8□□□□□ -0.52
DDB1-223ENST00000543658 UGT1A6P19224 532 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 MSH3P20585 1137 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 UGT1A1P22309 533 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 UGT1A4P22310 534 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 KELP23276 732 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 ACRV1P26436 265 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 CD27P26842 260 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 ARNTP27540 789 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 HTR1BP28222 390 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 TEAD1P28347 426 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 UGT1A3P35503 534 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 UGT1A5P35504 534 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 IGFALSP35858 605 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 SLC1A2P43004 574 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 THOP1P52888 689 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 ILF2Q12905 390 aaKnown RBP11.8□□□□□ -0.52
DDB1-223ENST00000543658 ITIH4Q14624 930 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 KBTBD12Q3ZCT8 623 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 ATP13A5Q4VNC0 1218 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 BEND6Q5SZJ8 279 aaPredicted RBP11.8□□□□□ -0.52
DDB1-223ENST00000543658 LYSMD4Q5XG99 296 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 PSAPL1Q6NUJ1 521 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 FBXO38Q6PIJ6 1188 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 PRR23BQ6ZRT6 265 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 KIAA0408Q6ZU52 694 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 SLC26A11Q86WA9 606 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 SERPINA9Q86WD7 417 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 HEATR4Q86WZ0 1026 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 LRRC6Q86X45 466 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 CILP2Q8IUL8 1156 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 UNC5BQ8IZJ1 945 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 RBFAQ8N0V3 343 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 NXPE1Q8N323 547 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 GPR150Q8NGU9 434 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 BTN2A2Q8WVV5 523 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 SCG3Q8WXD2 468 aaKnown RBP11.8□□□□□ -0.52
DDB1-223ENST00000543658 GLYATL1Q969I3 302 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms