RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 ESRP1Q6NXG1 681 aaKnown RBP19.29■□□□□ 0.68
SUDS3-204ENST00000543473 PTCD2Q8WV60 388 aaKnown RBP19.29■□□□□ 0.68
SUDS3-204ENST00000543473 TPK1Q9H3S4 243 aa19.29■□□□□ 0.68
SUDS3-204ENST00000543473 ING3Q9NXR8 418 aa19.29■□□□□ 0.68
SUDS3-204ENST00000543473 OAZ3Q9UMX2 235 aa19.29■□□□□ 0.68
SUDS3-204ENST00000543473 MOXD2PA6NHM9 499 aa19.29■□□□□ 0.68
SUDS3-204ENST00000543473 URODP06132 367 aa19.29■□□□□ 0.68
SUDS3-204ENST00000543473 IRF9Q00978 393 aa19.29■□□□□ 0.68
SUDS3-204ENST00000543473 ELAVL2Q12926 359 aaKnown RBP19.29■□□□□ 0.68
SUDS3-204ENST00000543473 RAP1GAP2Q684P5 730 aa19.29■□□□□ 0.68
SUDS3-204ENST00000543473 AHSA2Q719I0 299 aa19.29■□□□□ 0.68
SUDS3-204ENST00000543473 KRT78Q8N1N4 520 aa19.29■□□□□ 0.68
SUDS3-204ENST00000543473 NELL1Q92832 810 aa19.29■□□□□ 0.68
SUDS3-204ENST00000543473 XPNPEP1Q9NQW7 623 aa19.29■□□□□ 0.68
SUDS3-204ENST00000543473 SPEF2Q9C093 1822 aa19.29■□□□□ 0.68
SUDS3-204ENST00000543473 XKR5Q6UX68 686 aa19.29■□□□□ 0.68
SUDS3-204ENST00000543473 DENND6AQ8IWF6 608 aa19.29■□□□□ 0.68
SUDS3-204ENST00000543473 FCRL2Q96LA5 508 aaPredicted RBP19.29■□□□□ 0.68
SUDS3-204ENST00000543473 MLPHQ9BV36 600 aaPredicted RBP19.29■□□□□ 0.68
SUDS3-204ENST00000543473 IFT80Q9P2H3 777 aaPredicted RBP19.29■□□□□ 0.68
SUDS3-204ENST00000543473 FZD9O00144 591 aa19.29■□□□□ 0.68
SUDS3-204ENST00000543473 FBXW4P57775 412 aa19.29■□□□□ 0.68
SUDS3-204ENST00000543473 FCHO2Q0JRZ9 810 aa19.29■□□□□ 0.68
SUDS3-204ENST00000543473 DUSP28Q4G0W2 176 aa19.29■□□□□ 0.68
SUDS3-204ENST00000543473 ARMC12Q5T9G4 340 aa19.29■□□□□ 0.68
SUDS3-204ENST00000543473 NEK10Q6ZWH5 1172 aa19.29■□□□□ 0.68
SUDS3-204ENST00000543473 SCAIQ8N9R8 606 aa19.29■□□□□ 0.68
SUDS3-204ENST00000543473 NDRG1Q92597 394 aaKnown RBP19.29■□□□□ 0.68
SUDS3-204ENST00000543473 ASB8Q9H765 288 aa19.29■□□□□ 0.68
SUDS3-204ENST00000543473 GNPTGQ9UJJ9 305 aa19.29■□□□□ 0.68
SUDS3-204ENST00000543473 CKMP06732 381 aa19.28■□□□□ 0.68
SUDS3-204ENST00000543473 ARL2P36404 184 aa19.28■□□□□ 0.68
SUDS3-204ENST00000543473 GRM5P41594 1212 aa19.28■□□□□ 0.68
SUDS3-204ENST00000543473 ENTPD1P49961 510 aa19.28■□□□□ 0.68
SUDS3-204ENST00000543473 SCNN1GP51170 649 aa19.28■□□□□ 0.68
SUDS3-204ENST00000543473 MTA1Q13330 715 aa19.28■□□□□ 0.68
SUDS3-204ENST00000543473 GATAD2AQ86YP4 633 aa19.28■□□□□ 0.68
SUDS3-204ENST00000543473 LRRC17Q8N6Y2 441 aa19.28■□□□□ 0.68
SUDS3-204ENST00000543473 PACRGLQ8N7B6 248 aa19.28■□□□□ 0.68
SUDS3-204ENST00000543473 SPATA22Q8NHS9 363 aa19.28■□□□□ 0.68
SUDS3-204ENST00000543473 C12orf43Q96C57 262 aaKnown RBP19.28■□□□□ 0.68
SUDS3-204ENST00000543473 KLHL5Q96PQ7 755 aa19.28■□□□□ 0.68
SUDS3-204ENST00000543473 FEM1AQ9BSK4 669 aa19.28■□□□□ 0.68
SUDS3-204ENST00000543473 PDP1Q9P0J1 537 aaPredicted RBP19.28■□□□□ 0.68
SUDS3-204ENST00000543473 NR2E3Q9Y5X4 410 aa19.28■□□□□ 0.68
SUDS3-204ENST00000543473 AIREO43918 545 aa19.28■□□□□ 0.68
SUDS3-204ENST00000543473 DNAJA2O60884 412 aa19.28■□□□□ 0.68
SUDS3-204ENST00000543473 STX11O75558 287 aa19.28■□□□□ 0.68
SUDS3-204ENST00000543473 LRATO95237 230 aa19.28■□□□□ 0.68
SUDS3-204ENST00000543473 ABL2P42684 1182 aa19.28■□□□□ 0.68
SUDS3-204ENST00000543473 COPZ1P61923 177 aa19.28■□□□□ 0.68
SUDS3-204ENST00000543473 HSPA14Q0VDF9 509 aa19.28■□□□□ 0.68
SUDS3-204ENST00000543473 ZNF829Q3KNS6 432 aaPredicted RBP19.28■□□□□ 0.68
SUDS3-204ENST00000543473 FAM171A1Q5VUB5 890 aa19.28■□□□□ 0.68
SUDS3-204ENST00000543473 TXLNGYQ9BZA5 131 aa19.28■□□□□ 0.68
SUDS3-204ENST00000543473 MOV10Q9HCE1 1003 aaKnown RBP19.28■□□□□ 0.68
SUDS3-204ENST00000543473 BPIFA1Q9NP55 256 aa19.28■□□□□ 0.68
SUDS3-204ENST00000543473 SUV39H1O43463 412 aa19.28■□□□□ 0.68
SUDS3-204ENST00000543473 FGF1P05230 155 aa19.28■□□□□ 0.68
SUDS3-204ENST00000543473 CLTBP09497 229 aa19.28■□□□□ 0.68
SUDS3-204ENST00000543473 YAP1P46937 504 aaKnown RBP19.28■□□□□ 0.68
SUDS3-204ENST00000543473 TUBA4AP68366 448 aa19.28■□□□□ 0.68
SUDS3-204ENST00000543473 LCP2Q13094 533 aa19.28■□□□□ 0.68
SUDS3-204ENST00000543473 LDB1Q86U70 411 aaPredicted RBP19.28■□□□□ 0.68
SUDS3-204ENST00000543473 ABCG8Q9H221 673 aa19.28■□□□□ 0.68
SUDS3-204ENST00000543473 SIRPGQ9P1W8 387 aa19.28■□□□□ 0.68
SUDS3-204ENST00000543473 ING4Q9UNL4 249 aa19.28■□□□□ 0.68
SUDS3-204ENST00000543473 BTN3A3O00478 584 aa19.28■□□□□ 0.68
SUDS3-204ENST00000543473 PTPN3P26045 913 aa19.28■□□□□ 0.68
SUDS3-204ENST00000543473 RFX3P48380 749 aa19.28■□□□□ 0.68
SUDS3-204ENST00000543473 SPIBQ01892 262 aa19.28■□□□□ 0.68
SUDS3-204ENST00000543473 RHDQ02161 417 aa19.28■□□□□ 0.68
SUDS3-204ENST00000543473 PIP5K1BO14986 540 aa19.27■□□□□ 0.68
SUDS3-204ENST00000543473 FLT3LGP49771 235 aa19.27■□□□□ 0.68
SUDS3-204ENST00000543473 CLCQ05315 142 aa19.27■□□□□ 0.68
SUDS3-204ENST00000543473 SLC39A12Q504Y0 691 aa19.27■□□□□ 0.68
SUDS3-204ENST00000543473 ZC3H7AQ8IWR0 971 aaKnown RBP19.27■□□□□ 0.68
SUDS3-204ENST00000543473 DENND1AQ8TEH3 1009 aa19.27■□□□□ 0.68
SUDS3-204ENST00000543473 KAT8Q9H7Z6 458 aaKnown RBP19.27■□□□□ 0.68
SUDS3-204ENST00000543473 SF3B1O75533 1304 aaKnown RBP eCLIP19.27■□□□□ 0.686e-7■■■■■ 199.1
SUDS3-204ENST00000543473 CCDC162PA2VCL2 907 aa19.27■□□□□ 0.68
SUDS3-204ENST00000543473 PRKAR2AP13861 404 aaKnown RBP19.27■□□□□ 0.68
SUDS3-204ENST00000543473 ELP6Q0PNE2 266 aa19.27■□□□□ 0.68
SUDS3-204ENST00000543473 GALNT3Q14435 633 aa19.27■□□□□ 0.68
SUDS3-204ENST00000543473 FAM131AQ6UXB0 335 aa19.27■□□□□ 0.68
SUDS3-204ENST00000543473 ZNF614Q8N883 585 aa19.27■□□□□ 0.68
SUDS3-204ENST00000543473 DCBLD1Q8N8Z6 715 aa19.27■□□□□ 0.68
SUDS3-204ENST00000543473 PPTC7Q8NI37 304 aa19.27■□□□□ 0.68
SUDS3-204ENST00000543473 TCAF1Q9Y4C2 921 aa19.27■□□□□ 0.68
SUDS3-204ENST00000543473 TBX1O43435 398 aa19.27■□□□□ 0.67
SUDS3-204ENST00000543473 TCF3P15923 654 aa19.27■□□□□ 0.67
SUDS3-204ENST00000543473 CSNK2BP67870 215 aa19.27■□□□□ 0.67
SUDS3-204ENST00000543473 LSAMPQ13449 338 aa19.27■□□□□ 0.67
SUDS3-204ENST00000543473 CMPK2Q5EBM0 449 aa19.27■□□□□ 0.67
SUDS3-204ENST00000543473 CLHC1Q8NHS4 586 aa19.27■□□□□ 0.67
SUDS3-204ENST00000543473 PLEKHO2Q8TD55 490 aa19.27■□□□□ 0.67
SUDS3-204ENST00000543473 ZNF214Q9UL59 606 aaPredicted RBP19.27■□□□□ 0.67
SUDS3-204ENST00000543473 MRPS7Q9Y2R9 242 aaKnown RBP19.27■□□□□ 0.67
SUDS3-204ENST00000543473 MFHAS1Q9Y4C4 1052 aa19.27■□□□□ 0.67
SUDS3-204ENST00000543473 NEMP2A6NFY4 417 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms