RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 TMEM165Q9HC07 324 aa9.28□□□□□ -0.92
GNE-206ENST00000543356 KLC4Q9NSK0 619 aa9.28□□□□□ -0.92
GNE-206ENST00000543356 OXSMQ9NWU1 459 aa9.28□□□□□ -0.92
GNE-206ENST00000543356 XPR1Q9UBH6 696 aa9.28□□□□□ -0.92
GNE-206ENST00000543356 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.28□□□□□ -0.92
GNE-206ENST00000543356 TMEM265A0A087WTH1 108 aa9.27□□□□□ -0.92
GNE-206ENST00000543356 EDDM13A0A1B0GTR0 161 aa9.27□□□□□ -0.92
GNE-206ENST00000543356 UPK3BL1B0FP48 263 aa9.27□□□□□ -0.92
GNE-206ENST00000543356 TMEM114B3SHH9 223 aa9.27□□□□□ -0.92
GNE-206ENST00000543356 UPK3BL2E5RIL1 263 aa9.27□□□□□ -0.92
GNE-206ENST00000543356 ESR1P03372 595 aa9.27□□□□□ -0.92
GNE-206ENST00000543356 CCDC166P0CW27 439 aa9.27□□□□□ -0.92
GNE-206ENST00000543356 PKMP14618 531 aaKnown RBP9.27□□□□□ -0.92
GNE-206ENST00000543356 LHCGRP22888 699 aa9.27□□□□□ -0.92
GNE-206ENST00000543356 RPS3P23396 243 aaKnown RBP eCLIP9.27□□□□□ -0.92
GNE-206ENST00000543356 SP100P23497 879 aaPredicted RBP9.27□□□□□ -0.92
GNE-206ENST00000543356 VIPR1P32241 457 aa9.27□□□□□ -0.92
GNE-206ENST00000543356 PPARGP37231 505 aaPredicted RBP9.27□□□□□ -0.92
GNE-206ENST00000543356 GLRBP48167 497 aa9.27□□□□□ -0.92
GNE-206ENST00000543356 MESP2Q0VG99 397 aa9.27□□□□□ -0.92
GNE-206ENST00000543356 IFT88Q13099 833 aa9.27□□□□□ -0.92
GNE-206ENST00000543356 NFATC2Q13469 925 aa9.27□□□□□ -0.92
GNE-206ENST00000543356 ACAP2Q15057 778 aa9.27□□□□□ -0.92
GNE-206ENST00000543356 HNRNPA1L2Q32P51 320 aaKnown RBP9.27□□□□□ -0.92
GNE-206ENST00000543356 GPR33Q49SQ1 333 aa9.27□□□□□ -0.92
GNE-206ENST00000543356 FNDC3BQ53EP0 1204 aaKnown RBP9.27□□□□□ -0.92
GNE-206ENST00000543356 ZNF805Q5CZA5 627 aa9.27□□□□□ -0.92
GNE-206ENST00000543356 ARSIQ5FYB1 569 aa9.27□□□□□ -0.92
GNE-206ENST00000543356 PARM1Q6UWI2 310 aa9.27□□□□□ -0.92
GNE-206ENST00000543356 TMEM207Q6UWW9 146 aa9.27□□□□□ -0.92
GNE-206ENST00000543356 FAM151BQ6UXP7 276 aa9.27□□□□□ -0.92
GNE-206ENST00000543356 MTSS1LQ765P7 747 aa9.27□□□□□ -0.92
GNE-206ENST00000543356 PIM3Q86V86 326 aa9.27□□□□□ -0.92
GNE-206ENST00000543356 NECTIN4Q96NY8 510 aa9.27□□□□□ -0.92
GNE-206ENST00000543356 BIRC8Q96P09 236 aa9.27□□□□□ -0.92
GNE-206ENST00000543356 PLEKHG4BQ96PX9 1271 aa9.27□□□□□ -0.92
GNE-206ENST00000543356 TTC1Q99614 292 aa9.27□□□□□ -0.92
GNE-206ENST00000543356 POMKQ9H5K3 350 aa9.27□□□□□ -0.92
GNE-206ENST00000543356 IL26Q9NPH9 171 aa9.27□□□□□ -0.92
GNE-206ENST00000543356 CLDND1Q9NY35 253 aa9.27□□□□□ -0.92
GNE-206ENST00000543356 TAS2R13Q9NYV9 303 aa9.27□□□□□ -0.92
GNE-206ENST00000543356 B4GALT6Q9UBX8 382 aa9.27□□□□□ -0.92
GNE-206ENST00000543356 MED16Q9Y2X0 877 aa9.27□□□□□ -0.92
GNE-206ENST00000543356 PCDHB1Q9Y5F3 818 aa9.27□□□□□ -0.92
GNE-206ENST00000543356 OAS3Q9Y6K5 1087 aaKnown RBP9.27□□□□□ -0.92
GNE-206ENST00000543356 USH1CQ9Y6N9 552 aa9.27□□□□□ -0.92
GNE-206ENST00000543356 PLXNA2O75051 1894 aa9.27□□□□□ -0.93
GNE-206ENST00000543356 CCT8L1PA6NM43 557 aa9.27□□□□□ -0.93
GNE-206ENST00000543356 AGAP14A8MT82 685 aa9.27□□□□□ -0.93
GNE-206ENST00000543356 ARNTLO00327 626 aa9.27□□□□□ -0.93
GNE-206ENST00000543356 ZSCAN9O15535 394 aaPredicted RBP9.27□□□□□ -0.93
GNE-206ENST00000543356 TRIM13O60858 407 aa9.27□□□□□ -0.93
GNE-206ENST00000543356 DNAJC6O75061 913 aa9.27□□□□□ -0.93
GNE-206ENST00000543356 RHOBTB1O94844 696 aa9.27□□□□□ -0.93
GNE-206ENST00000543356 RBP1P09455 135 aa9.27□□□□□ -0.93
GNE-206ENST00000543356 C1SP09871 688 aa9.27□□□□□ -0.93
GNE-206ENST00000543356 ZNF37AP17032 561 aaPredicted RBP9.27□□□□□ -0.93
GNE-206ENST00000543356 POU3F3P20264 500 aaPredicted RBP9.27□□□□□ -0.93
GNE-206ENST00000543356 FMO4P31512 558 aa9.27□□□□□ -0.93
GNE-206ENST00000543356 SLC1A6P48664 564 aa9.27□□□□□ -0.93
GNE-206ENST00000543356 ASPHQ12797 758 aa9.27□□□□□ -0.93
GNE-206ENST00000543356 PDAP1Q13442 181 aaKnown RBP9.27□□□□□ -0.93
GNE-206ENST00000543356 ITGA9Q13797 1035 aa9.27□□□□□ -0.93
GNE-206ENST00000543356 CSHL1Q14406 222 aa9.27□□□□□ -0.93
GNE-206ENST00000543356 CTSL3PQ5NE16 218 aa9.27□□□□□ -0.93
GNE-206ENST00000543356 LIPMQ5VYY2 423 aa9.27□□□□□ -0.93
GNE-206ENST00000543356 ZCCHC23Q6ZST2 131 aa9.27□□□□□ -0.93
GNE-206ENST00000543356 TAS2R42Q7RTR8 314 aa9.27□□□□□ -0.93
GNE-206ENST00000543356 CRLF3Q8IUI8 442 aa9.27□□□□□ -0.93
GNE-206ENST00000543356 UCMAQ8WVF2 138 aa9.27□□□□□ -0.93
GNE-206ENST00000543356 ANKRD49Q8WVL7 239 aa9.27□□□□□ -0.93
GNE-206ENST00000543356 EZH1Q92800 747 aaPredicted RBP9.27□□□□□ -0.93
GNE-206ENST00000543356 FGF14Q92915 247 aa9.27□□□□□ -0.93
GNE-206ENST00000543356 SIKE1Q9BRV8 207 aa9.27□□□□□ -0.93
GNE-206ENST00000543356 TMEM245Q9H330 911 aa9.27□□□□□ -0.93
GNE-206ENST00000543356 SYTL2Q9HCH5 934 aa9.27□□□□□ -0.93
GNE-206ENST00000543356 NPHS2Q9NP85 383 aa9.27□□□□□ -0.93
GNE-206ENST00000543356 NFKBIL1Q9UBC1 381 aaPredicted RBP9.27□□□□□ -0.93
GNE-206ENST00000543356 EPS15L1Q9UBC2 864 aa9.27□□□□□ -0.93
GNE-206ENST00000543356 MTCH2Q9Y6C9 303 aa9.27□□□□□ -0.93
GNE-206ENST00000543356 VPS26AO75436 327 aa9.26□□□□□ -0.93
GNE-206ENST00000543356 KIAA0754O94854 1291 aa9.26□□□□□ -0.93
GNE-206ENST00000543356 PRNPP04156 253 aa9.26□□□□□ -0.93
GNE-206ENST00000543356 RPSAP08865 295 aaKnown RBP9.26□□□□□ -0.93
GNE-206ENST00000543356 TIMP2P16035 220 aa9.26□□□□□ -0.93
GNE-206ENST00000543356 ACRV1P26436 265 aa9.26□□□□□ -0.93
GNE-206ENST00000543356 GDI1P31150 447 aa9.26□□□□□ -0.93
GNE-206ENST00000543356 LTBRP36941 435 aa9.26□□□□□ -0.93
GNE-206ENST00000543356 PFKPQ01813 784 aa9.26□□□□□ -0.93
GNE-206ENST00000543356 PTSQ03393 145 aa9.26□□□□□ -0.93
GNE-206ENST00000543356 OVGP1Q12889 678 aa9.26□□□□□ -0.93
GNE-206ENST00000543356 ZNF234Q14588 700 aa9.26□□□□□ -0.93
GNE-206ENST00000543356 ITPRIPL2Q3MIP1 535 aa9.26□□□□□ -0.93
GNE-206ENST00000543356 DPPA4Q7L190 304 aa9.26□□□□□ -0.93
GNE-206ENST00000543356 SERPINA9Q86WD7 417 aa9.26□□□□□ -0.93
GNE-206ENST00000543356 MYLK4Q86YV6 388 aaPredicted RBP9.26□□□□□ -0.93
GNE-206ENST00000543356 RBFAQ8N0V3 343 aa9.26□□□□□ -0.93
GNE-206ENST00000543356 TMIEQ8NEW7 156 aa9.26□□□□□ -0.93
GNE-206ENST00000543356 ST13P5Q8NFI4 369 aaPredicted RBP9.26□□□□□ -0.93
GNE-206ENST00000543356 DTX3LQ8TDB6 740 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms