RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 TMEM92Q6UXU6 159 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 ELMOD2Q8IZ81 293 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 PPM1NQ8N819 430 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 NKAIN3Q8N8D7 197 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 SLC7A14Q8TBB6 771 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 ADAM32Q8TC27 787 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 RNF139Q8WU17 664 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 MZB1Q8WU39 189 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 REXO5Q96IC2 774 aaKnown RBP7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 TM9SF2Q99805 663 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 TMEM106CQ9BVX2 250 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 ATP13A1Q9HD20 1204 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 CUEDC1Q9NWM3 386 aaPredicted RBP7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 ZNF624Q9P2J8 865 aaPredicted RBP7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 VPS51Q9UID3 782 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 FBXO10Q9UK96 956 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 FBXW11Q9UKB1 542 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 NEU3Q9UQ49 428 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 PSMD12O00232 456 aaPredicted RBP7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 PITPNM1O00562 1244 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 DCLK1O15075 740 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 UGT1A9O60656 530 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 UGT1A6P19224 532 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 UGT1A1P22309 533 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 UGT1A4P22310 534 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 GRK2P25098 689 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 ADRA1BP35368 520 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 UGT1A3P35503 534 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 UGT1A5P35504 534 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 PGFP49763 221 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 MAPK10P53779 464 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 YWHAHQ04917 246 aaPredicted RBP7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 NME3Q13232 169 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 STX3Q13277 289 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 ITGADQ13349 1161 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 BMPR2Q13873 1038 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 SGCAQ16586 387 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 CYP2A13Q16696 494 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 ALFQ53S48 1182 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 IDO2Q6ZQW0 420 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 BEND4Q6ZU67 534 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 KBTBD6Q86V97 674 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 DBF4BQ8NFT6 615 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 BORCS5Q969J3 196 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 ASB16Q96NS5 453 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 BIRC8Q96P09 236 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 ZPBPQ9BS86 351 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 C9orf16Q9BUW7 83 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 BRINP2Q9C0B6 783 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 SEMA6AQ9H2E6 1030 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 UGT1A7Q9HAW7 530 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 UGT1A10Q9HAW8 530 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 UGT1A8Q9HAW9 530 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 SACM1LQ9NTJ5 587 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 PAK5Q9P286 719 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 ZNHIT2Q9UHR6 403 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 STON1Q9Y6Q2 735 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 SYNJ2BP-COX16A0A087WUM0 186 aa7.97□□□□□ -1.13
PDLIM5-221ENST00000542407 AIM2O14862 343 aa7.97□□□□□ -1.13
PDLIM5-221ENST00000542407 GCATO75600 419 aa7.97□□□□□ -1.13
PDLIM5-221ENST00000542407 OR4Q2P0C623 313 aa7.97□□□□□ -1.13
PDLIM5-221ENST00000542407 ZNF23P17027 643 aa7.97□□□□□ -1.13
PDLIM5-221ENST00000542407 AOC1P19801 751 aa7.97□□□□□ -1.13
PDLIM5-221ENST00000542407 ITGAXP20702 1163 aa7.97□□□□□ -1.13
PDLIM5-221ENST00000542407 CXCR3P49682 368 aa7.97□□□□□ -1.13
PDLIM5-221ENST00000542407 GATMP50440 423 aa7.97□□□□□ -1.13
PDLIM5-221ENST00000542407 NDST2P52849 883 aa7.97□□□□□ -1.13
PDLIM5-221ENST00000542407 ESRRGP62508 458 aa7.97□□□□□ -1.13
PDLIM5-221ENST00000542407 PAFAH1B3Q15102 231 aaKnown RBP7.97□□□□□ -1.13
PDLIM5-221ENST00000542407 VARS2Q5ST30 1063 aaKnown RBP7.97□□□□□ -1.13
PDLIM5-221ENST00000542407 VWA5B1Q5TIE3 1220 aa7.97□□□□□ -1.13
PDLIM5-221ENST00000542407 OR7E24Q6IFN5 339 aa7.97□□□□□ -1.13
PDLIM5-221ENST00000542407 KCNT2Q6UVM3 1135 aa7.97□□□□□ -1.13
PDLIM5-221ENST00000542407 FRMD7Q6ZUT3 714 aa7.97□□□□□ -1.13
PDLIM5-221ENST00000542407 ZNF534Q76KX8 674 aa7.97□□□□□ -1.13
PDLIM5-221ENST00000542407 GPR141Q7Z602 305 aa7.97□□□□□ -1.13
PDLIM5-221ENST00000542407 TAC4Q86UU9 113 aa7.97□□□□□ -1.13
PDLIM5-221ENST00000542407 IGDCC3Q8IVU1 814 aa7.97□□□□□ -1.13
PDLIM5-221ENST00000542407 CDKL3Q8IVW4 592 aaPredicted RBP7.97□□□□□ -1.13
PDLIM5-221ENST00000542407 THEM5Q8N1Q8 247 aa7.97□□□□□ -1.13
PDLIM5-221ENST00000542407 OR6P1Q8NGX9 317 aa7.97□□□□□ -1.13
PDLIM5-221ENST00000542407 SCAMP5Q8TAC9 235 aa7.97□□□□□ -1.13
PDLIM5-221ENST00000542407 PHOSPHO2Q8TCD6 241 aa7.97□□□□□ -1.13
PDLIM5-221ENST00000542407 URGCPQ8TCY9 931 aa7.97□□□□□ -1.13
PDLIM5-221ENST00000542407 ACTRT2Q8TDY3 377 aa7.97□□□□□ -1.13
PDLIM5-221ENST00000542407 EDEM1Q92611 657 aa7.97□□□□□ -1.13
PDLIM5-221ENST00000542407 C7orf26Q96N11 449 aa7.97□□□□□ -1.13
PDLIM5-221ENST00000542407 C19orf43Q9BQ61 176 aa7.97□□□□□ -1.13
PDLIM5-221ENST00000542407 MARCH5Q9NX47 278 aa7.97□□□□□ -1.13
PDLIM5-221ENST00000542407 EHD3Q9NZN3 535 aa7.97□□□□□ -1.13
PDLIM5-221ENST00000542407 COX16Q9P0S2 106 aa7.97□□□□□ -1.13
PDLIM5-221ENST00000542407 HCSTQ9UBK5 93 aa7.97□□□□□ -1.13
PDLIM5-221ENST00000542407 TRPS1Q9UHF7 1281 aa7.97□□□□□ -1.13
PDLIM5-221ENST00000542407 OGDHLQ9ULD0 1010 aa7.97□□□□□ -1.13
PDLIM5-221ENST00000542407 CACNG2Q9Y698 323 aa7.97□□□□□ -1.13
PDLIM5-221ENST00000542407 SCN5AQ14524 2016 aa7.97□□□□□ -1.13
PDLIM5-221ENST00000542407 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.97□□□□□ -1.13
PDLIM5-221ENST00000542407 ARHGEF37A1IGU5 675 aa7.97□□□□□ -1.13
PDLIM5-221ENST00000542407 SDR42E2A6NKP2 422 aa7.97□□□□□ -1.13
PDLIM5-221ENST00000542407 PIP5K1CO60331 668 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms