RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 OR4D9Q8NGE8 314 aa15.51■□□□□ 0.07
VPS33A-206ENST00000542310 PATE1Q8WXA2 126 aa15.51■□□□□ 0.07
VPS33A-206ENST00000542310 TADA1Q96BN2 335 aa15.51■□□□□ 0.07
VPS33A-206ENST00000542310 IMP4Q96G21 291 aaKnown RBP15.51■□□□□ 0.07
VPS33A-206ENST00000542310 TRIB3Q96RU7 358 aa15.51■□□□□ 0.07
VPS33A-206ENST00000542310 WDR24Q96S15 920 aa15.51■□□□□ 0.07
VPS33A-206ENST00000542310 SRPK1Q96SB4 655 aaKnown RBP15.51■□□□□ 0.07
VPS33A-206ENST00000542310 NUDT22Q9BRQ3 303 aa15.51■□□□□ 0.07
VPS33A-206ENST00000542310 SLC25A51Q9H1U9 297 aa15.51■□□□□ 0.07
VPS33A-206ENST00000542310 SEMA6CQ9H3T2 930 aa15.51■□□□□ 0.07
VPS33A-206ENST00000542310 FAM83DQ9H4H8 585 aa15.51■□□□□ 0.07
VPS33A-206ENST00000542310 RAD18Q9NS91 495 aa15.51■□□□□ 0.07
VPS33A-206ENST00000542310 SEPT10Q9P0V9 454 aa15.51■□□□□ 0.07
VPS33A-206ENST00000542310 CNOT6Q9ULM6 557 aaKnown RBP15.51■□□□□ 0.07
VPS33A-206ENST00000542310 IGHV1OR21-1A0A087WYE8 117 aa15.5■□□□□ 0.07
VPS33A-206ENST00000542310 FADS2P1A8MWK0 482 aa15.5■□□□□ 0.07
VPS33A-206ENST00000542310 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.5■□□□□ 0.07
VPS33A-206ENST00000542310 INPP4BO15327 924 aa15.5■□□□□ 0.07
VPS33A-206ENST00000542310 PSTPIP1O43586 416 aa15.5■□□□□ 0.07
VPS33A-206ENST00000542310 PRB1P04280 392 aa15.5■□□□□ 0.07
VPS33A-206ENST00000542310 SLC2A4P14672 509 aa15.5■□□□□ 0.07
VPS33A-206ENST00000542310 ITIH1P19827 911 aa15.5■□□□□ 0.07
VPS33A-206ENST00000542310 CD1CP29017 333 aa15.5■□□□□ 0.07
VPS33A-206ENST00000542310 NR2C2P49116 596 aa15.5■□□□□ 0.07
VPS33A-206ENST00000542310 LIMK2P53671 638 aa15.5■□□□□ 0.07
VPS33A-206ENST00000542310 HADHBP55084 474 aaKnown RBP15.5■□□□□ 0.07
VPS33A-206ENST00000542310 C16orf72Q14CZ0 275 aa15.5■□□□□ 0.07
VPS33A-206ENST00000542310 AMZ1Q400G9 498 aa15.5■□□□□ 0.07
VPS33A-206ENST00000542310 NT5DC3Q86UY8 548 aa15.5■□□□□ 0.07
VPS33A-206ENST00000542310 RFX6Q8HWS3 928 aa15.5■□□□□ 0.07
VPS33A-206ENST00000542310 SFRP1Q8N474 314 aa15.5■□□□□ 0.07
VPS33A-206ENST00000542310 AVL9Q8NBF6 648 aa15.5■□□□□ 0.07
VPS33A-206ENST00000542310 SLC37A2Q8TED4 501 aa15.5■□□□□ 0.07
VPS33A-206ENST00000542310 LRRN4Q8WUT4 740 aa15.5■□□□□ 0.07
VPS33A-206ENST00000542310 HERPUD2Q9BSE4 406 aa15.5■□□□□ 0.07
VPS33A-206ENST00000542310 ZSCAN5AQ9BUG6 496 aa15.5■□□□□ 0.07
VPS33A-206ENST00000542310 CARD9Q9H257 536 aa15.5■□□□□ 0.07
VPS33A-206ENST00000542310 STN1Q9H668 368 aaKnown RBP15.5■□□□□ 0.07
VPS33A-206ENST00000542310 ZFYVE1Q9HBF4 777 aa15.5■□□□□ 0.07
VPS33A-206ENST00000542310 RDH14Q9HBH5 336 aa15.5■□□□□ 0.07
VPS33A-206ENST00000542310 MAGEE1Q9HCI5 957 aa15.5■□□□□ 0.07
VPS33A-206ENST00000542310 OAS3Q9Y6K5 1087 aaKnown RBP15.5■□□□□ 0.07
VPS33A-206ENST00000542310 SDK2Q58EX2 2172 aa15.5■□□□□ 0.07
VPS33A-206ENST00000542310 ZNF106Q9H2Y7 1883 aaKnown RBP15.49■□□□□ 0.07
VPS33A-206ENST00000542310 PRAMEF33A0A0G2JMD5 474 aa15.49■□□□□ 0.07
VPS33A-206ENST00000542310 IGHV5-10-1A0A0J9YXX1 117 aa15.49■□□□□ 0.07
VPS33A-206ENST00000542310 AKR1B15C9JRZ8 316 aaPredicted RBP15.49■□□□□ 0.07
VPS33A-206ENST00000542310 PPM1DO15297 605 aa15.49■□□□□ 0.07
VPS33A-206ENST00000542310 PRAMEF10O60809 474 aa15.49■□□□□ 0.07
VPS33A-206ENST00000542310 ASMTLO95671 621 aa15.49■□□□□ 0.07
VPS33A-206ENST00000542310 THRAP10827 490 aa15.49■□□□□ 0.07
VPS33A-206ENST00000542310 CSF2RBP32927 897 aa15.49■□□□□ 0.07
VPS33A-206ENST00000542310 ETV5P41161 510 aa15.49■□□□□ 0.07
VPS33A-206ENST00000542310 CFHR1Q03591 330 aa15.49■□□□□ 0.07
VPS33A-206ENST00000542310 GALNT3Q14435 633 aa15.49■□□□□ 0.07
VPS33A-206ENST00000542310 TAZQ16635 292 aa15.49■□□□□ 0.07
VPS33A-206ENST00000542310 ZNF569Q5MCW4 686 aa15.49■□□□□ 0.07
VPS33A-206ENST00000542310 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.49■□□□□ 0.07
VPS33A-206ENST00000542310 TMEM164Q5U3C3 297 aa15.49■□□□□ 0.07
VPS33A-206ENST00000542310 MARK2Q7KZI7 788 aaKnown RBP15.49■□□□□ 0.07
VPS33A-206ENST00000542310 LYSMD3Q7Z3D4 306 aa15.49■□□□□ 0.07
VPS33A-206ENST00000542310 ZNF843Q8N446 348 aa15.49■□□□□ 0.07
VPS33A-206ENST00000542310 CCDC112Q8NEF3 446 aa15.49■□□□□ 0.07
VPS33A-206ENST00000542310 CCDC74BQ96LY2 380 aa15.49■□□□□ 0.07
VPS33A-206ENST00000542310 SARS2Q9NP81 518 aaKnown RBP15.49■□□□□ 0.07
VPS33A-206ENST00000542310 KCNK4Q9NYG8 393 aa15.49■□□□□ 0.07
VPS33A-206ENST00000542310 PLEKHM1Q9Y4G2 1056 aa15.49■□□□□ 0.07
VPS33A-206ENST00000542310 A0A0A6YYK5 440 aaPredicted RBP15.48■□□□□ 0.07
VPS33A-206ENST00000542310 A6NCN8 305 aa15.48■□□□□ 0.07
VPS33A-206ENST00000542310 C9orf172C9J069 976 aa15.48■□□□□ 0.07
VPS33A-206ENST00000542310 SPOPO43791 374 aa15.48■□□□□ 0.07
VPS33A-206ENST00000542310 DUX1O43812 170 aa15.48■□□□□ 0.07
VPS33A-206ENST00000542310 NUAK1O60285 661 aa15.48■□□□□ 0.07
VPS33A-206ENST00000542310 CDKN2BP42772 138 aa15.48■□□□□ 0.07
VPS33A-206ENST00000542310 CLCNKAP51800 687 aa15.48■□□□□ 0.07
VPS33A-206ENST00000542310 EPHA4P54764 986 aa15.48■□□□□ 0.07
VPS33A-206ENST00000542310 CDK18Q07002 472 aa15.48■□□□□ 0.07
VPS33A-206ENST00000542310 TBX2Q13207 712 aaPredicted RBP15.48■□□□□ 0.07
VPS33A-206ENST00000542310 TFDP2Q14188 446 aa15.48■□□□□ 0.07
VPS33A-206ENST00000542310 PRKD1Q15139 912 aaPredicted RBP15.48■□□□□ 0.07
VPS33A-206ENST00000542310 SARM1Q6SZW1 724 aa15.48■□□□□ 0.07
VPS33A-206ENST00000542310 NPNTQ6UXI9 565 aa15.48■□□□□ 0.07
VPS33A-206ENST00000542310 ZNF574Q6ZN55 896 aaPredicted RBP15.48■□□□□ 0.07
VPS33A-206ENST00000542310 DTX1Q86Y01 620 aa15.48■□□□□ 0.07
VPS33A-206ENST00000542310 TRAM1L1Q8N609 369 aa15.48■□□□□ 0.07
VPS33A-206ENST00000542310 AGBL5Q8NDL9 886 aa15.48■□□□□ 0.07
VPS33A-206ENST00000542310 OR10G6Q8NH81 332 aa15.48■□□□□ 0.07
VPS33A-206ENST00000542310 USP7Q93009 1102 aa15.48■□□□□ 0.07
VPS33A-206ENST00000542310 SH3KBP1Q96B97 665 aa15.48■□□□□ 0.07
VPS33A-206ENST00000542310 AGAP3Q96P47 875 aa15.48■□□□□ 0.07
VPS33A-206ENST00000542310 EPB41L1Q9H4G0 881 aa15.48■□□□□ 0.07
VPS33A-206ENST00000542310 FOXJ2Q9P0K8 574 aa15.48■□□□□ 0.07
VPS33A-206ENST00000542310 ZNHIT2Q9UHR6 403 aa15.48■□□□□ 0.07
VPS33A-206ENST00000542310 ZNF711Q9Y462 761 aa15.48■□□□□ 0.07
VPS33A-206ENST00000542310 PCDHGA3Q9Y5H0 932 aa15.48■□□□□ 0.07
VPS33A-206ENST00000542310 ADGRG1Q9Y653 693 aa15.48■□□□□ 0.07
VPS33A-206ENST00000542310 KIR2DS5A0A0G2JLQ3 304 aa15.47■□□□□ 0.07
VPS33A-206ENST00000542310 A0A0G2JNG1 304 aa15.47■□□□□ 0.07
VPS33A-206ENST00000542310 OR5K4A6NMS3 321 aa15.47■□□□□ 0.07
VPS33A-206ENST00000542310 KIR2DS3K7RE56 304 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms