RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 SEMA3CQ99985 751 aa17.11■□□□□ 0.33
SPIDR-227ENST00000541342 MEAF6Q9HAF1 191 aa17.11■□□□□ 0.33
SPIDR-227ENST00000541342 GREM1O60565 184 aa17.11■□□□□ 0.33
SPIDR-227ENST00000541342 CLDN11O75508 207 aa17.11■□□□□ 0.33
SPIDR-227ENST00000541342 SEPT6Q14141 434 aa17.11■□□□□ 0.33
SPIDR-227ENST00000541342 ZNF789Q5FWF6 425 aa17.11■□□□□ 0.33
SPIDR-227ENST00000541342 ALDH16A1Q8IZ83 802 aa17.11■□□□□ 0.33
SPIDR-227ENST00000541342 ARL14EPQ8N8R7 260 aaPredicted RBP17.11■□□□□ 0.33
SPIDR-227ENST00000541342 LPGAT1Q92604 370 aa17.11■□□□□ 0.33
SPIDR-227ENST00000541342 CYP4F12Q9HCS2 524 aa17.11■□□□□ 0.33
SPIDR-227ENST00000541342 TCRBV3S1A0A5B6 114 aa17.11■□□□□ 0.33
SPIDR-227ENST00000541342 PLOD2O00469 737 aa17.11■□□□□ 0.33
SPIDR-227ENST00000541342 ATXN1LP0C7T5 689 aaKnown RBP17.11■□□□□ 0.33
SPIDR-227ENST00000541342 CYTH1Q15438 398 aa17.11■□□□□ 0.33
SPIDR-227ENST00000541342 SIRPB2Q5JXA9 342 aa17.11■□□□□ 0.33
SPIDR-227ENST00000541342 C8orf82Q6P1X6 216 aaPredicted RBP17.11■□□□□ 0.33
SPIDR-227ENST00000541342 C2CD4AQ8NCU7 369 aaPredicted RBP17.11■□□□□ 0.33
SPIDR-227ENST00000541342 ELMO2Q96JJ3 720 aa17.11■□□□□ 0.33
SPIDR-227ENST00000541342 NSMCE3Q96MG7 304 aa17.11■□□□□ 0.33
SPIDR-227ENST00000541342 OLFM1Q99784 485 aa17.11■□□□□ 0.33
SPIDR-227ENST00000541342 POLR1EQ9GZS1 481 aaKnown RBP17.11■□□□□ 0.33
SPIDR-227ENST00000541342 OLAHQ9NV23 265 aa17.11■□□□□ 0.33
SPIDR-227ENST00000541342 CROCCQ5TZA2 2017 aa17.1■□□□□ 0.33
SPIDR-227ENST00000541342 CARNS1A5YM72 827 aa17.1■□□□□ 0.33
SPIDR-227ENST00000541342 SERPINH1P50454 418 aaKnown RBP17.1■□□□□ 0.33
SPIDR-227ENST00000541342 EMP3P54852 163 aa17.1■□□□□ 0.33
SPIDR-227ENST00000541342 SMAD3P84022 425 aaKnown RBP17.1■□□□□ 0.33
SPIDR-227ENST00000541342 UGP2Q16851 508 aa17.1■□□□□ 0.33
SPIDR-227ENST00000541342 ZNF470Q6ECI4 717 aa17.1■□□□□ 0.33
SPIDR-227ENST00000541342 FIBCD1Q8N539 461 aa17.1■□□□□ 0.33
SPIDR-227ENST00000541342 OR9I1Q8NGQ6 314 aa17.1■□□□□ 0.33
SPIDR-227ENST00000541342 DDI1Q8WTU0 396 aa17.1■□□□□ 0.33
SPIDR-227ENST00000541342 SPON2Q9BUD6 331 aa17.1■□□□□ 0.33
SPIDR-227ENST00000541342 RETREG1Q9H6L5 497 aa17.1■□□□□ 0.33
SPIDR-227ENST00000541342 CCDC167Q9P0B6 97 aa17.1■□□□□ 0.33
SPIDR-227ENST00000541342 STOML2Q9UJZ1 356 aa17.1■□□□□ 0.33
SPIDR-227ENST00000541342 LOC285095A0A1B0GVY8 99 aa17.1■□□□□ 0.33
SPIDR-227ENST00000541342 H0YJX3 145 aa17.1■□□□□ 0.33
SPIDR-227ENST00000541342 ZNF235Q14590 738 aa17.1■□□□□ 0.33
SPIDR-227ENST00000541342 TECRLQ5HYJ1 363 aa17.1■□□□□ 0.33
SPIDR-227ENST00000541342 CXorf57Q6NSI4 855 aaKnown RBP17.1■□□□□ 0.33
SPIDR-227ENST00000541342 CYP2R1Q6VVX0 501 aa17.1■□□□□ 0.33
SPIDR-227ENST00000541342 GAREM2Q75VX8 874 aa17.1■□□□□ 0.33
SPIDR-227ENST00000541342 GPR65Q8IYL9 337 aa17.1■□□□□ 0.33
SPIDR-227ENST00000541342 GAB3Q8WWW8 586 aa17.1■□□□□ 0.33
SPIDR-227ENST00000541342 ZNF599Q96NL3 588 aa17.1■□□□□ 0.33
SPIDR-227ENST00000541342 UHRF1Q96T88 793 aaPredicted RBP17.1■□□□□ 0.33
SPIDR-227ENST00000541342 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.1■□□□□ 0.33
SPIDR-227ENST00000541342 A0A1B0GVM2 712 aa17.09■□□□□ 0.33
SPIDR-227ENST00000541342 KDELR3O43731 214 aa17.09■□□□□ 0.33
SPIDR-227ENST00000541342 OLFM2O95897 454 aa17.09■□□□□ 0.33
SPIDR-227ENST00000541342 ATP5F1P24539 256 aaPredicted RBP17.09■□□□□ 0.33
SPIDR-227ENST00000541342 CHST9Q7L1S5 443 aa17.09■□□□□ 0.33
SPIDR-227ENST00000541342 HERC6Q8IVU3 1022 aa17.09■□□□□ 0.33
SPIDR-227ENST00000541342 HS6ST3Q8IZP7 471 aa17.09■□□□□ 0.33
SPIDR-227ENST00000541342 MYO1HQ8N1T3 1032 aa17.09■□□□□ 0.33
SPIDR-227ENST00000541342 TSPAN14Q8NG11 270 aa17.09■□□□□ 0.33
SPIDR-227ENST00000541342 CLP1Q92989 425 aaKnown RBP17.09■□□□□ 0.33
SPIDR-227ENST00000541342 CIB1Q99828 191 aa17.09■□□□□ 0.33
SPIDR-227ENST00000541342 SLC39A3Q9BRY0 314 aa17.09■□□□□ 0.33
SPIDR-227ENST00000541342 GALNT8Q9NY28 637 aa17.09■□□□□ 0.33
SPIDR-227ENST00000541342 MAFFQ9ULX9 164 aa17.09■□□□□ 0.33
SPIDR-227ENST00000541342 A8MT66 165 aa17.09■□□□□ 0.33
SPIDR-227ENST00000541342 UBFD1O14562 309 aaKnown RBP17.09■□□□□ 0.33
SPIDR-227ENST00000541342 RHOCP08134 193 aa17.09■□□□□ 0.33
SPIDR-227ENST00000541342 ZNF23P17027 643 aa17.09■□□□□ 0.33
SPIDR-227ENST00000541342 POLD2P49005 469 aa17.09■□□□□ 0.33
SPIDR-227ENST00000541342 CYP4F8P98187 520 aa17.09■□□□□ 0.33
SPIDR-227ENST00000541342 FASTKQ14296 549 aaKnown RBP17.09■□□□□ 0.33
SPIDR-227ENST00000541342 AGKQ53H12 422 aa17.09■□□□□ 0.33
SPIDR-227ENST00000541342 ALG1LQ6GMV1 187 aa17.09■□□□□ 0.33
SPIDR-227ENST00000541342 BADQ92934 168 aa17.09■□□□□ 0.33
SPIDR-227ENST00000541342 PHF12Q96QT6 1004 aa17.09■□□□□ 0.33
SPIDR-227ENST00000541342 DUS2Q9NX74 493 aaKnown RBP17.09■□□□□ 0.33
SPIDR-227ENST00000541342 MTF2Q9Y483 593 aaPredicted RBP17.09■□□□□ 0.33
SPIDR-227ENST00000541342 HEMK1Q9Y5R4 338 aaPredicted RBP17.09■□□□□ 0.33
SPIDR-227ENST00000541342 DOCK6Q96HP0 2047 aa17.09■□□□□ 0.33
SPIDR-227ENST00000541342 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.09■□□□□ 0.33
SPIDR-227ENST00000541342 ILVBLA1L0T0 632 aa17.09■□□□□ 0.33
SPIDR-227ENST00000541342 PSMD12O00232 456 aaPredicted RBP17.09■□□□□ 0.33
SPIDR-227ENST00000541342 TRMUO75648 421 aaKnown RBP17.09■□□□□ 0.33
SPIDR-227ENST00000541342 FGBP02675 491 aa17.09■□□□□ 0.33
SPIDR-227ENST00000541342 RGRP47804 291 aa17.09■□□□□ 0.33
SPIDR-227ENST00000541342 ALDH3B2P48448 385 aa17.09■□□□□ 0.33
SPIDR-227ENST00000541342 PLK1P53350 603 aa17.09■□□□□ 0.33
SPIDR-227ENST00000541342 ZNF177Q13360 481 aaPredicted RBP17.09■□□□□ 0.33
SPIDR-227ENST00000541342 CSHL1Q14406 222 aa17.09■□□□□ 0.33
SPIDR-227ENST00000541342 LILRA6Q6PI73 481 aa17.09■□□□□ 0.33
SPIDR-227ENST00000541342 ITIH5Q86UX2 942 aa17.09■□□□□ 0.33
SPIDR-227ENST00000541342 TMC8Q8IU68 726 aa17.09■□□□□ 0.33
SPIDR-227ENST00000541342 DUS3LQ96G46 650 aaKnown RBP17.09■□□□□ 0.33
SPIDR-227ENST00000541342 RANBP9Q96S59 729 aa17.09■□□□□ 0.33
SPIDR-227ENST00000541342 LRRC3Q9BY71 257 aa17.09■□□□□ 0.33
SPIDR-227ENST00000541342 TMEM181Q9P2C4 612 aa17.09■□□□□ 0.33
SPIDR-227ENST00000541342 CNOT6Q9ULM6 557 aaKnown RBP17.09■□□□□ 0.33
SPIDR-227ENST00000541342 SNX13Q9Y5W8 968 aa17.09■□□□□ 0.33
SPIDR-227ENST00000541342 RPL10P27635 214 aaKnown RBP17.08■□□□□ 0.33
SPIDR-227ENST00000541342 PFKPQ01813 784 aa17.08■□□□□ 0.33
SPIDR-227ENST00000541342 SQLEQ14534 574 aa17.08■□□□□ 0.33
SPIDR-227ENST00000541342 MYBPC3Q14896 1274 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms