RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 IL26Q9NPH9 171 aa9.16□□□□□ -0.94
SNHG1-215ENST00000540904 EVA1BQ9NVM1 165 aa9.16□□□□□ -0.94
SNHG1-215ENST00000540904 NCKIPSDQ9NZQ3 722 aa9.16□□□□□ -0.94
SNHG1-215ENST00000540904 IL17CQ9P0M4 197 aa9.16□□□□□ -0.94
SNHG1-215ENST00000540904 ZNHIT2Q9UHR6 403 aa9.16□□□□□ -0.94
SNHG1-215ENST00000540904 KLK13Q9UKR3 277 aa9.16□□□□□ -0.94
SNHG1-215ENST00000540904 WASF3Q9UPY6 502 aa9.16□□□□□ -0.94
SNHG1-215ENST00000540904 ZKSCAN5Q9Y2L8 839 aa9.16□□□□□ -0.94
SNHG1-215ENST00000540904 PRKAB1Q9Y478 270 aa9.16□□□□□ -0.94
SNHG1-215ENST00000540904 GPSM3Q9Y4H4 160 aa9.16□□□□□ -0.94
SNHG1-215ENST00000540904 ARL5AQ9Y689 179 aa9.16□□□□□ -0.94
SNHG1-215ENST00000540904 OAS3Q9Y6K5 1087 aaKnown RBP9.16□□□□□ -0.94
SNHG1-215ENST00000540904 U3KQA8 63 aa9.16□□□□□ -0.94
SNHG1-215ENST00000540904 CACNA1AO00555 2505 aa9.16□□□□□ -0.94
SNHG1-215ENST00000540904 PCNX2A6NKB5 2137 aa9.16□□□□□ -0.94
SNHG1-215ENST00000540904 FAM149AA5PLN7 773 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 C2orf81A6NN90 581 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 B4DGG1 531 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 E7EVH7 732 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 STX7O15400 261 aaKnown RBP9.15□□□□□ -0.94
SNHG1-215ENST00000540904 PSMD3O43242 534 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 MTX2O75431 263 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 AP2A1O95782 977 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 ZSCAN5DPP0CG00 497 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 CDK4P11802 303 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 LPOP22079 712 aaPredicted RBP9.15□□□□□ -0.94
SNHG1-215ENST00000540904 AK4P27144 223 aaPredicted RBP9.15□□□□□ -0.94
SNHG1-215ENST00000540904 SPAM1P38567 509 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 ADCY8P40145 1251 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 KCNJ1P48048 391 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 RPIAP49247 311 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 LMAN1P49257 510 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 CLDN6P56747 220 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 CCDC173Q0VFZ6 552 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 ILKQ13418 452 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 PTPRCAPQ14761 206 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 TAF1AQ15573 450 aaPredicted RBP9.15□□□□□ -0.94
SNHG1-215ENST00000540904 KCTD19Q17RG1 926 aaPredicted RBP9.15□□□□□ -0.94
SNHG1-215ENST00000540904 ATP13A5Q4VNC0 1218 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 PYCR3Q53H96 274 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 ZNF648Q5T619 568 aaPredicted RBP9.15□□□□□ -0.94
SNHG1-215ENST00000540904 ZDHHC20Q5W0Z9 365 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 PDPK2PQ6A1A2 396 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 DENND5AQ6IQ26 1287 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 GUSBP11Q6P575 273 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 DRICH1Q6PGQ1 229 aaPredicted RBP9.15□□□□□ -0.94
SNHG1-215ENST00000540904 SLC30A9Q6PML9 568 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 FAM151BQ6UXP7 276 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 MARCH9Q86YJ5 346 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 GALNT13Q8IUC8 556 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 PHYKPLQ8IUZ5 450 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 SPNS2Q8IVW8 549 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 KLHDC8BQ8IXV7 354 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 ARL10Q8N8L6 244 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 PRELID2Q8N945 189 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 GLIS1Q8NBF1 620 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 KYQ8NBH2 561 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 OR4K2Q8NGD2 314 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 IFI44Q8TCB0 444 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 BRSK1Q8TDC3 778 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 GPBAR1Q8TDU6 330 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 COG1Q8WTW3 980 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 GLYATL1Q969I3 302 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 SCARF2Q96GP6 870 aaPredicted RBP9.15□□□□□ -0.94
SNHG1-215ENST00000540904 PBKQ96KB5 322 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 OSBPL9Q96SU4 736 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 AP1M1Q9BXS5 423 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 GSDMCQ9BYG8 508 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 DPEP2Q9H4A9 486 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 ETNK1Q9HBU6 452 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 ARNT2Q9HBZ2 717 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 RAB6BQ9NRW1 208 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 HOMER3Q9NSC5 361 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 PIH1D1Q9NWS0 290 aaKnown RBP9.15□□□□□ -0.94
SNHG1-215ENST00000540904 TRNAU1APQ9NX07 287 aaKnown RBP9.15□□□□□ -0.94
SNHG1-215ENST00000540904 SMARCAL1Q9NZC9 954 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.15□□□□□ -0.94
SNHG1-215ENST00000540904 VPS18Q9P253 973 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 PAK5Q9P286 719 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 ATXN10Q9UBB4 475 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 NFKBIL1Q9UBC1 381 aaPredicted RBP9.15□□□□□ -0.94
SNHG1-215ENST00000540904 FEZ2Q9UHY8 353 aaPredicted RBP9.15□□□□□ -0.94
SNHG1-215ENST00000540904 KCTD3Q9Y597 815 aa9.15□□□□□ -0.94
SNHG1-215ENST00000540904 TP53BP1Q12888 1972 aaPredicted RBP9.15□□□□□ -0.95
SNHG1-215ENST00000540904 COL5A1P20908 1838 aaPredicted RBP9.15□□□□□ -0.95
SNHG1-215ENST00000540904 GLYATL1P3A0A0U1RQE8 302 aa9.14□□□□□ -0.95
SNHG1-215ENST00000540904 EME2A4GXA9 379 aaPredicted RBP9.14□□□□□ -0.95
SNHG1-215ENST00000540904 PGRMC1O00264 195 aaKnown RBP9.14□□□□□ -0.95
SNHG1-215ENST00000540904 GPR39O43194 453 aa9.14□□□□□ -0.95
SNHG1-215ENST00000540904 UGT1A9O60656 530 aa9.14□□□□□ -0.95
SNHG1-215ENST00000540904 DNAJC6O75061 913 aa9.14□□□□□ -0.95
SNHG1-215ENST00000540904 PPFIA2O75334 1257 aa9.14□□□□□ -0.95
SNHG1-215ENST00000540904 CRTAMO95727 393 aa9.14□□□□□ -0.95
SNHG1-215ENST00000540904 APRTP07741 180 aa9.14□□□□□ -0.95
SNHG1-215ENST00000540904 ZNF8P17098 575 aaPredicted RBP9.14□□□□□ -0.95
SNHG1-215ENST00000540904 TPH1P17752 444 aa9.14□□□□□ -0.95
SNHG1-215ENST00000540904 UGT1A6P19224 532 aa9.14□□□□□ -0.95
SNHG1-215ENST00000540904 UGT1A1P22309 533 aa9.14□□□□□ -0.95
SNHG1-215ENST00000540904 UGT1A4P22310 534 aa9.14□□□□□ -0.95
SNHG1-215ENST00000540904 RPL22P35268 128 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms