RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 BOD1L1Q8NFC6 3051 aa13□□□□□ -0.33
SEMA4D-223ENST00000540475 IGHV1OR21-1A0A087WYE8 117 aa13□□□□□ -0.33
SEMA4D-223ENST00000540475 A6NCN8 305 aa13□□□□□ -0.33
SEMA4D-223ENST00000540475 RHPN2P1A8MT19 583 aa13□□□□□ -0.33
SEMA4D-223ENST00000540475 GPR89AB7ZAQ6 455 aa13□□□□□ -0.33
SEMA4D-223ENST00000540475 AKR1B15C9JRZ8 316 aaPredicted RBP13□□□□□ -0.33
SEMA4D-223ENST00000540475 GPR89BP0CG08 455 aa13□□□□□ -0.33
SEMA4D-223ENST00000540475 HGFP14210 728 aa13□□□□□ -0.33
SEMA4D-223ENST00000540475 COMTP21964 271 aa13□□□□□ -0.33
SEMA4D-223ENST00000540475 ACTR1BP42025 376 aa13□□□□□ -0.33
SEMA4D-223ENST00000540475 CDKN2BP42772 138 aa13□□□□□ -0.33
SEMA4D-223ENST00000540475 CLCNKAP51800 687 aa13□□□□□ -0.33
SEMA4D-223ENST00000540475 LIMK2P53671 638 aa13□□□□□ -0.33
SEMA4D-223ENST00000540475 ACTR1AP61163 376 aa13□□□□□ -0.33
SEMA4D-223ENST00000540475 CFHR1Q03591 330 aa13□□□□□ -0.33
SEMA4D-223ENST00000540475 AP1B1Q10567 949 aa13□□□□□ -0.33
SEMA4D-223ENST00000540475 C16orf72Q14CZ0 275 aa13□□□□□ -0.33
SEMA4D-223ENST00000540475 PRKD1Q15139 912 aaPredicted RBP13□□□□□ -0.33
SEMA4D-223ENST00000540475 PDPK2PQ6A1A2 396 aa13□□□□□ -0.33
SEMA4D-223ENST00000540475 FOXR1Q6PIV2 292 aa13□□□□□ -0.33
SEMA4D-223ENST00000540475 MFSD7Q6UXD7 560 aa13□□□□□ -0.33
SEMA4D-223ENST00000540475 NPNTQ6UXI9 565 aa13□□□□□ -0.33
SEMA4D-223ENST00000540475 BZW1Q7L1Q6 419 aaKnown RBP13□□□□□ -0.33
SEMA4D-223ENST00000540475 TRIM74Q86UV6 250 aa13□□□□□ -0.33
SEMA4D-223ENST00000540475 GALNT13Q8IUC8 556 aa13□□□□□ -0.33
SEMA4D-223ENST00000540475 SFRP1Q8N474 314 aa13□□□□□ -0.33
SEMA4D-223ENST00000540475 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13□□□□□ -0.33
SEMA4D-223ENST00000540475 TC2NQ8N9U0 490 aa13□□□□□ -0.33
SEMA4D-223ENST00000540475 OR4D9Q8NGE8 314 aa13□□□□□ -0.33
SEMA4D-223ENST00000540475 CCHCR1Q8TD31 782 aa13□□□□□ -0.33
SEMA4D-223ENST00000540475 TRAF3IP1Q8TDR0 691 aaPredicted RBP13□□□□□ -0.33
SEMA4D-223ENST00000540475 TEKT5Q96M29 485 aa13□□□□□ -0.33
SEMA4D-223ENST00000540475 SRPK1Q96SB4 655 aaKnown RBP13□□□□□ -0.33
SEMA4D-223ENST00000540475 CARD9Q9H257 536 aa13□□□□□ -0.33
SEMA4D-223ENST00000540475 ZFYVE1Q9HBF4 777 aa13□□□□□ -0.33
SEMA4D-223ENST00000540475 IGHV5-10-1A0A0J9YXX1 117 aa12.99□□□□□ -0.33
SEMA4D-223ENST00000540475 C9orf172C9J069 976 aa12.99□□□□□ -0.33
SEMA4D-223ENST00000540475 PSTPIP1O43586 416 aa12.99□□□□□ -0.33
SEMA4D-223ENST00000540475 NUAK1O60285 661 aa12.99□□□□□ -0.33
SEMA4D-223ENST00000540475 EML2O95834 649 aa12.99□□□□□ -0.33
SEMA4D-223ENST00000540475 JMJD7P0C870 316 aa12.99□□□□□ -0.33
SEMA4D-223ENST00000540475 LIPCP11150 499 aa12.99□□□□□ -0.33
SEMA4D-223ENST00000540475 ITIH1P19827 911 aa12.99□□□□□ -0.33
SEMA4D-223ENST00000540475 CD82P27701 267 aa12.99□□□□□ -0.33
SEMA4D-223ENST00000540475 ALDH4A1P30038 563 aa12.99□□□□□ -0.33
SEMA4D-223ENST00000540475 ETV5P41161 510 aa12.99□□□□□ -0.33
SEMA4D-223ENST00000540475 GPLD1P80108 840 aa12.99□□□□□ -0.33
SEMA4D-223ENST00000540475 CDK18Q07002 472 aa12.99□□□□□ -0.33
SEMA4D-223ENST00000540475 ZFYVE27Q5T4F4 411 aa12.99□□□□□ -0.33
SEMA4D-223ENST00000540475 ARHGAP40Q5TG30 622 aa12.99□□□□□ -0.33
SEMA4D-223ENST00000540475 DOK6Q6PKX4 331 aa12.99□□□□□ -0.33
SEMA4D-223ENST00000540475 LYSMD3Q7Z3D4 306 aa12.99□□□□□ -0.33
SEMA4D-223ENST00000540475 DTX3LQ8TDB6 740 aa12.99□□□□□ -0.33
SEMA4D-223ENST00000540475 RNF25Q96BH1 459 aaPredicted RBP12.99□□□□□ -0.33
SEMA4D-223ENST00000540475 AGAP3Q96P47 875 aa12.99□□□□□ -0.33
SEMA4D-223ENST00000540475 CCNL2Q96S94 520 aaPredicted RBP12.99□□□□□ -0.33
SEMA4D-223ENST00000540475 NUDT22Q9BRQ3 303 aa12.99□□□□□ -0.33
SEMA4D-223ENST00000540475 RDH14Q9HBH5 336 aa12.99□□□□□ -0.33
SEMA4D-223ENST00000540475 GLOD4Q9HC38 313 aa12.99□□□□□ -0.33
SEMA4D-223ENST00000540475 SARS2Q9NP81 518 aaKnown RBP12.99□□□□□ -0.33
SEMA4D-223ENST00000540475 RAD18Q9NS91 495 aa12.99□□□□□ -0.33
SEMA4D-223ENST00000540475 PCDHGA3Q9Y5H0 932 aa12.99□□□□□ -0.33
SEMA4D-223ENST00000540475 ALG6Q9Y672 507 aa12.99□□□□□ -0.33
SEMA4D-223ENST00000540475 ZNF106Q9H2Y7 1883 aaKnown RBP12.99□□□□□ -0.33
SEMA4D-223ENST00000540475 A0A0A6YYK5 440 aaPredicted RBP12.98□□□□□ -0.33
SEMA4D-223ENST00000540475 LOC285095A0A1B0GVY8 99 aa12.98□□□□□ -0.33
SEMA4D-223ENST00000540475 PRR19A6NJB7 356 aa12.98□□□□□ -0.33
SEMA4D-223ENST00000540475 EIF4E1BA6NMX2 242 aaKnown RBP12.98□□□□□ -0.33
SEMA4D-223ENST00000540475 CHUKO15111 745 aa12.98□□□□□ -0.33
SEMA4D-223ENST00000540475 INPP4BO15327 924 aa12.98□□□□□ -0.33
SEMA4D-223ENST00000540475 EPOP01588 193 aa12.98□□□□□ -0.33
SEMA4D-223ENST00000540475 KRT1P04264 644 aa12.98□□□□□ -0.33
SEMA4D-223ENST00000540475 ATP1A1P05023 1023 aaKnown RBP12.98□□□□□ -0.33
SEMA4D-223ENST00000540475 THRAP10827 490 aa12.98□□□□□ -0.33
SEMA4D-223ENST00000540475 PTPN3P26045 913 aa12.98□□□□□ -0.33
SEMA4D-223ENST00000540475 CD68P34810 354 aaPredicted RBP12.98□□□□□ -0.33
SEMA4D-223ENST00000540475 MAGEA1P43355 309 aa12.98□□□□□ -0.33
SEMA4D-223ENST00000540475 ARSDP51689 593 aa12.98□□□□□ -0.33
SEMA4D-223ENST00000540475 ADCY2Q08462 1091 aa12.98□□□□□ -0.33
SEMA4D-223ENST00000540475 C19orf57Q0VDD7 668 aa12.98□□□□□ -0.33
SEMA4D-223ENST00000540475 WASHC5Q12768 1159 aa12.98□□□□□ -0.33
SEMA4D-223ENST00000540475 TFDP2Q14188 446 aa12.98□□□□□ -0.33
SEMA4D-223ENST00000540475 GALNT3Q14435 633 aa12.98□□□□□ -0.33
SEMA4D-223ENST00000540475 MAP9Q49MG5 647 aa12.98□□□□□ -0.33
SEMA4D-223ENST00000540475 TMEM71Q6P5X7 295 aa12.98□□□□□ -0.33
SEMA4D-223ENST00000540475 IYDQ6PHW0 289 aa12.98□□□□□ -0.33
SEMA4D-223ENST00000540475 CCDC81Q6ZN84 652 aa12.98□□□□□ -0.33
SEMA4D-223ENST00000540475 USP53Q70EK8 1073 aa12.98□□□□□ -0.33
SEMA4D-223ENST00000540475 RFX6Q8HWS3 928 aa12.98□□□□□ -0.33
SEMA4D-223ENST00000540475 CCDC170Q8IYT3 715 aa12.98□□□□□ -0.33
SEMA4D-223ENST00000540475 KATNAL2Q8IYT4 538 aa12.98□□□□□ -0.33
SEMA4D-223ENST00000540475 ZNF843Q8N446 348 aa12.98□□□□□ -0.33
SEMA4D-223ENST00000540475 TRAM1L1Q8N609 369 aa12.98□□□□□ -0.33
SEMA4D-223ENST00000540475 RNF214Q8ND24 703 aa12.98□□□□□ -0.33
SEMA4D-223ENST00000540475 GPR26Q8NDV2 337 aa12.98□□□□□ -0.33
SEMA4D-223ENST00000540475 SLC37A2Q8TED4 501 aa12.98□□□□□ -0.33
SEMA4D-223ENST00000540475 ZSCAN5AQ9BUG6 496 aa12.98□□□□□ -0.33
SEMA4D-223ENST00000540475 CEP41Q9BYV8 373 aa12.98□□□□□ -0.33
SEMA4D-223ENST00000540475 SUDS3Q9H7L9 328 aaPredicted RBP12.98□□□□□ -0.33
SEMA4D-223ENST00000540475 TRIM39Q9HCM9 518 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms