RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 ZNF252P-AS1Q0IIN9 211 aa9.44□□□□□ -0.9
CTNNA1-243ENST00000540387 TBRG1Q3YBR2 411 aa9.44□□□□□ -0.9
CTNNA1-243ENST00000540387 BRDTQ58F21 947 aaPredicted RBP9.44□□□□□ -0.9
CTNNA1-243ENST00000540387 SEL1L3Q68CR1 1132 aa9.44□□□□□ -0.9
CTNNA1-243ENST00000540387 VN1R5Q7Z5H4 357 aa9.44□□□□□ -0.9
CTNNA1-243ENST00000540387 NOXA1Q86UR1 476 aa9.44□□□□□ -0.9
CTNNA1-243ENST00000540387 HORMAD1Q86X24 394 aa9.44□□□□□ -0.9
CTNNA1-243ENST00000540387 NLGN4XQ8N0W4 816 aa9.44□□□□□ -0.9
CTNNA1-243ENST00000540387 FLCNQ8NFG4 579 aa9.44□□□□□ -0.9
CTNNA1-243ENST00000540387 SLC2A14Q8TDB8 520 aa9.44□□□□□ -0.9
CTNNA1-243ENST00000540387 SLC22A17Q8WUG5 538 aa9.44□□□□□ -0.9
CTNNA1-243ENST00000540387 POLR3FQ9H1D9 316 aaPredicted RBP9.44□□□□□ -0.9
CTNNA1-243ENST00000540387 SPAG4Q9NPE6 437 aa9.44□□□□□ -0.9
CTNNA1-243ENST00000540387 ATP6V1HQ9UI12 483 aa9.44□□□□□ -0.9
CTNNA1-243ENST00000540387 DHRS12A0PJE2 317 aa9.44□□□□□ -0.9
CTNNA1-243ENST00000540387 TYW5A2RUC4 315 aaKnown RBP9.44□□□□□ -0.9
CTNNA1-243ENST00000540387 KRT87PA6NCN2 255 aa9.44□□□□□ -0.9
CTNNA1-243ENST00000540387 SLC16A4O15374 487 aa9.44□□□□□ -0.9
CTNNA1-243ENST00000540387 F2P00734 622 aa9.44□□□□□ -0.9
CTNNA1-243ENST00000540387 CFHP08603 1231 aa9.44□□□□□ -0.9
CTNNA1-243ENST00000540387 RBP1P09455 135 aa9.44□□□□□ -0.9
CTNNA1-243ENST00000540387 PSKH1P11801 424 aa9.44□□□□□ -0.9
CTNNA1-243ENST00000540387 IL7RP16871 459 aa9.44□□□□□ -0.9
CTNNA1-243ENST00000540387 CD68P34810 354 aaPredicted RBP9.44□□□□□ -0.9
CTNNA1-243ENST00000540387 NPTX2P47972 431 aa9.44□□□□□ -0.9
CTNNA1-243ENST00000540387 PPM1JQ5JR12 505 aa9.44□□□□□ -0.9
CTNNA1-243ENST00000540387 RBM48Q5RL73 367 aaKnown RBP9.44□□□□□ -0.9
CTNNA1-243ENST00000540387 STRADAQ7RTN6 431 aa9.44□□□□□ -0.9
CTNNA1-243ENST00000540387 PLPP6Q8IY26 295 aa9.44□□□□□ -0.9
CTNNA1-243ENST00000540387 TNS4Q8IZW8 715 aa9.44□□□□□ -0.9
CTNNA1-243ENST00000540387 SLAIN1Q8ND83 568 aa9.44□□□□□ -0.9
CTNNA1-243ENST00000540387 CDKL2Q92772 493 aa9.44□□□□□ -0.9
CTNNA1-243ENST00000540387 SLC45A3Q96JT2 553 aa9.44□□□□□ -0.9
CTNNA1-243ENST00000540387 BCL7BQ9BQE9 202 aa9.44□□□□□ -0.9
CTNNA1-243ENST00000540387 CBWD1Q9BRT8 395 aa9.44□□□□□ -0.9
CTNNA1-243ENST00000540387 XPNPEP3Q9NQH7 507 aa9.44□□□□□ -0.9
CTNNA1-243ENST00000540387 SETD4Q9NVD3 440 aa9.44□□□□□ -0.9
CTNNA1-243ENST00000540387 ZNF358Q9NW07 568 aa9.44□□□□□ -0.9
CTNNA1-243ENST00000540387 TNFRSF10DQ9UBN6 386 aa9.44□□□□□ -0.9
CTNNA1-243ENST00000540387 WDR81Q562E7 1941 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 IGKV6-21A0A0C4DH24 114 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 E2F8A0AVK6 867 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 C3orf70A6NLC5 250 aaPredicted RBP9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 A8MUA0 341 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 H0YAE9 185 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 K7ENM7 598 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 PMM2O15305 246 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 CHADO15335 359 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 ADAMTS4O75173 837 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 JUNP05412 331 aaKnown RBP9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 CHRNGP07510 517 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 GJB1P08034 283 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 IL10P22301 178 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 CNTFP26441 200 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 ARL2P36404 184 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 TALDO1P37837 337 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 ETV1P50549 477 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 PRMT2P55345 433 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 TFAMQ00059 246 aaKnown RBP9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 PURAQ00577 322 aaKnown RBP9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 KRR1Q13601 381 aaKnown RBP9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 GLRA4Q5JXX5 417 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 SAMD4BQ5PRF9 694 aaKnown RBP9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 EFCAB12Q6NXP0 572 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 CXCL17Q6UXB2 119 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 GALNT11Q8NCW6 608 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 POMGNT1Q8WZA1 660 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 HDAC10Q969S8 669 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 MARC2Q969Z3 335 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 ILKAPQ9H0C8 392 aaPredicted RBP9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 ERVMER34-1Q9H9K5 563 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 TLR9Q9NR96 1032 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 TBC1D13Q9NVG8 400 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 CACNA2D2Q9NY47 1150 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 SLC17A6Q9P2U8 582 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 SARDHQ9UL12 918 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 GRID2O43424 1007 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 SLC4A1P02730 911 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 ALBP02768 609 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 PDGFAP04085 211 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 ATF6P18850 670 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 IL1R2P27930 398 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 CLCN3P51790 818 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 ARPP19P56211 112 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 NCS1P62166 190 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 IL1RL1Q01638 556 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 INCA1Q0VD86 236 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 DMP1Q13316 513 aaPredicted RBP9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 MFSD10Q14728 455 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 PON2Q15165 354 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 GRIK4Q16099 956 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 IMPG1Q17R60 797 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 ZIK1Q3SY52 487 aaPredicted RBP9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 PITRM1Q5JRX3 1037 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 ZNF484Q5JVG2 852 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 MARCH8Q5T0T0 291 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 TMEM151BQ8IW70 566 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 LINC00518Q8N0U6 118 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 LILRB2Q8N423 598 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms