RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 CCDC163A0A0D9SF12 145 aa18.8■□□□□ 0.6
TNFRSF1A-213ENST00000540022 CD3EAPO15446 510 aaKnown RBP18.8■□□□□ 0.6
TNFRSF1A-213ENST00000540022 CACNG1Q06432 222 aa18.8■□□□□ 0.6
TNFRSF1A-213ENST00000540022 DPTQ07507 201 aa18.8■□□□□ 0.6
TNFRSF1A-213ENST00000540022 SGCGQ13326 291 aa18.8■□□□□ 0.6
TNFRSF1A-213ENST00000540022 CTBP1Q13363 440 aa18.8■□□□□ 0.6
TNFRSF1A-213ENST00000540022 NFATC2Q13469 925 aa18.8■□□□□ 0.6
TNFRSF1A-213ENST00000540022 WSCD2Q2TBF2 565 aa18.8■□□□□ 0.6
TNFRSF1A-213ENST00000540022 ATP13A5Q4VNC0 1218 aa18.8■□□□□ 0.6
TNFRSF1A-213ENST00000540022 USP39Q53GS9 565 aaKnown RBP18.8■□□□□ 0.6
TNFRSF1A-213ENST00000540022 FASTKD1Q53R41 847 aaKnown RBP18.8■□□□□ 0.6
TNFRSF1A-213ENST00000540022 ZNF470Q6ECI4 717 aa18.8■□□□□ 0.6
TNFRSF1A-213ENST00000540022 LDB1Q86U70 411 aaPredicted RBP18.8■□□□□ 0.6
TNFRSF1A-213ENST00000540022 WDR5BQ86VZ2 330 aa18.8■□□□□ 0.6
TNFRSF1A-213ENST00000540022 CNTN4Q8IWV2 1026 aa18.8■□□□□ 0.6
TNFRSF1A-213ENST00000540022 CTAGE3PQ8IX95 158 aa18.8■□□□□ 0.6
TNFRSF1A-213ENST00000540022 TRAM1L1Q8N609 369 aa18.8■□□□□ 0.6
TNFRSF1A-213ENST00000540022 PPM1NQ8N819 430 aa18.8■□□□□ 0.6
TNFRSF1A-213ENST00000540022 SUMF1Q8NBK3 374 aa18.8■□□□□ 0.6
TNFRSF1A-213ENST00000540022 GPR150Q8NGU9 434 aa18.8■□□□□ 0.6
TNFRSF1A-213ENST00000540022 DTX3LQ8TDB6 740 aa18.8■□□□□ 0.6
TNFRSF1A-213ENST00000540022 CDKL2Q92772 493 aa18.8■□□□□ 0.6
TNFRSF1A-213ENST00000540022 FAM167BQ9BTA0 163 aa18.8■□□□□ 0.6
TNFRSF1A-213ENST00000540022 CATSPERZQ9NTU4 200 aa18.8■□□□□ 0.6
TNFRSF1A-213ENST00000540022 ZFATQ9P243 1243 aa18.8■□□□□ 0.6
TNFRSF1A-213ENST00000540022 NFS1Q9Y697 457 aa18.8■□□□□ 0.6
TNFRSF1A-213ENST00000540022 AGAP14A8MT82 685 aa18.79■□□□□ 0.6
TNFRSF1A-213ENST00000540022 FADS2P1A8MWK0 482 aa18.79■□□□□ 0.6
TNFRSF1A-213ENST00000540022 K7ESM1 405 aa18.79■□□□□ 0.6
TNFRSF1A-213ENST00000540022 LATO43561 262 aa18.79■□□□□ 0.6
TNFRSF1A-213ENST00000540022 SOD1P00441 154 aa18.79■□□□□ 0.6
TNFRSF1A-213ENST00000540022 IGHV4-34P06331 123 aa18.79■□□□□ 0.6
TNFRSF1A-213ENST00000540022 ITGALP20701 1170 aa18.79■□□□□ 0.6
TNFRSF1A-213ENST00000540022 STAT4Q14765 748 aa18.79■□□□□ 0.6
TNFRSF1A-213ENST00000540022 KIAA0895LQ68EN5 471 aa18.79■□□□□ 0.6
TNFRSF1A-213ENST00000540022 SNX20Q7Z614 316 aa18.79■□□□□ 0.6
TNFRSF1A-213ENST00000540022 NLRP8Q86W28 1048 aa18.79■□□□□ 0.6
TNFRSF1A-213ENST00000540022 LONP2Q86WA8 852 aa18.79■□□□□ 0.6
TNFRSF1A-213ENST00000540022 OTUD6BQ8N6M0 293 aa18.79■□□□□ 0.6
TNFRSF1A-213ENST00000540022 TP53I13Q8NBR0 393 aaPredicted RBP18.79■□□□□ 0.6
TNFRSF1A-213ENST00000540022 PLA2G15Q8NCC3 412 aa18.79■□□□□ 0.6
TNFRSF1A-213ENST00000540022 CALML6Q8TD86 181 aa18.79■□□□□ 0.6
TNFRSF1A-213ENST00000540022 ASB12Q8WXK4 309 aa18.79■□□□□ 0.6
TNFRSF1A-213ENST00000540022 MRRFQ96E11 262 aaKnown RBP18.79■□□□□ 0.6
TNFRSF1A-213ENST00000540022 KLF6Q99612 283 aaPredicted RBP18.79■□□□□ 0.6
TNFRSF1A-213ENST00000540022 ZSCAN5AQ9BUG6 496 aa18.79■□□□□ 0.6
TNFRSF1A-213ENST00000540022 MBNL1Q9NR56 388 aaKnown RBP18.79■□□□□ 0.6
TNFRSF1A-213ENST00000540022 KCTD5Q9NXV2 234 aa18.79■□□□□ 0.6
TNFRSF1A-213ENST00000540022 VPS18Q9P253 973 aa18.79■□□□□ 0.6
TNFRSF1A-213ENST00000540022 TMPRSS11EQ9UL52 423 aa18.79■□□□□ 0.6
TNFRSF1A-213ENST00000540022 PSAT1Q9Y617 370 aa18.79■□□□□ 0.6
TNFRSF1A-213ENST00000540022 TRBV5-4A0A0C4DH59 114 aa18.79■□□□□ 0.6
TNFRSF1A-213ENST00000540022 EXOC1LA0A1B0GW35 172 aa18.79■□□□□ 0.6
TNFRSF1A-213ENST00000540022 RAD51BO15315 384 aa18.79■□□□□ 0.6
TNFRSF1A-213ENST00000540022 SLC31A1O15431 190 aa18.79■□□□□ 0.6
TNFRSF1A-213ENST00000540022 HRO43593 1189 aa18.79■□□□□ 0.6
TNFRSF1A-213ENST00000540022 BCKDHBP21953 392 aa18.79■□□□□ 0.6
TNFRSF1A-213ENST00000540022 SLC1A2P43004 574 aa18.79■□□□□ 0.6
TNFRSF1A-213ENST00000540022 CCR5P51681 352 aa18.79■□□□□ 0.6
TNFRSF1A-213ENST00000540022 ITGA9Q13797 1035 aa18.79■□□□□ 0.6
TNFRSF1A-213ENST00000540022 LRRC14Q15048 493 aa18.79■□□□□ 0.6
TNFRSF1A-213ENST00000540022 KLHL38Q2WGJ6 581 aa18.79■□□□□ 0.6
TNFRSF1A-213ENST00000540022 SETMARQ53H47 684 aaPredicted RBP18.79■□□□□ 0.6
TNFRSF1A-213ENST00000540022 MRNIPQ6NTE8 343 aa18.79■□□□□ 0.6
TNFRSF1A-213ENST00000540022 MARK2Q7KZI7 788 aaKnown RBP18.79■□□□□ 0.6
TNFRSF1A-213ENST00000540022 TAS2R42Q7RTR8 314 aa18.79■□□□□ 0.6
TNFRSF1A-213ENST00000540022 CILP2Q8IUL8 1156 aa18.79■□□□□ 0.6
TNFRSF1A-213ENST00000540022 LMNTD2Q8IXW0 634 aa18.79■□□□□ 0.6
TNFRSF1A-213ENST00000540022 CENPTQ96BT3 561 aa18.79■□□□□ 0.6
TNFRSF1A-213ENST00000540022 SPACA7Q96KW9 195 aa18.79■□□□□ 0.6
TNFRSF1A-213ENST00000540022 ZIM3Q96PE6 472 aa18.79■□□□□ 0.6
TNFRSF1A-213ENST00000540022 EBF2Q9HAK2 575 aa18.79■□□□□ 0.6
TNFRSF1A-213ENST00000540022 FZD3Q9NPG1 666 aa18.79■□□□□ 0.6
TNFRSF1A-213ENST00000540022 ZNF446Q9NWS9 450 aa18.79■□□□□ 0.6
TNFRSF1A-213ENST00000540022 FBXO5Q9UKT4 447 aa18.79■□□□□ 0.6
TNFRSF1A-213ENST00000540022 DMXL1Q9Y485 3027 aa18.79■□□□□ 0.6
TNFRSF1A-213ENST00000540022 POC1B-GALNT4F8VUJ3 575 aa18.78■□□□□ 0.6
TNFRSF1A-213ENST00000540022 FSBPO95073 299 aa18.78■□□□□ 0.6
TNFRSF1A-213ENST00000540022 OGNP20774 298 aaKnown RBP18.78■□□□□ 0.6
TNFRSF1A-213ENST00000540022 GCAP28676 217 aa18.78■□□□□ 0.6
TNFRSF1A-213ENST00000540022 MPP1Q00013 466 aa18.78■□□□□ 0.6
TNFRSF1A-213ENST00000540022 GPR33Q49SQ1 333 aa18.78■□□□□ 0.6
TNFRSF1A-213ENST00000540022 ZNF789Q5FWF6 425 aa18.78■□□□□ 0.6
TNFRSF1A-213ENST00000540022 KDM7AQ6ZMT4 941 aa18.78■□□□□ 0.6
TNFRSF1A-213ENST00000540022 HDXQ7Z353 690 aa18.78■□□□□ 0.6
TNFRSF1A-213ENST00000540022 LRRC6Q86X45 466 aa18.78■□□□□ 0.6
TNFRSF1A-213ENST00000540022 C2CD4AQ8NCU7 369 aaPredicted RBP18.78■□□□□ 0.6
TNFRSF1A-213ENST00000540022 ZBTB9Q96C00 473 aa18.78■□□□□ 0.6
TNFRSF1A-213ENST00000540022 BIRC7Q96CA5 298 aa18.78■□□□□ 0.6
TNFRSF1A-213ENST00000540022 PAFAH2Q99487 392 aa18.78■□□□□ 0.6
TNFRSF1A-213ENST00000540022 MYOCQ99972 504 aa18.78■□□□□ 0.6
TNFRSF1A-213ENST00000540022 CCDC77Q9BR77 488 aa18.78■□□□□ 0.6
TNFRSF1A-213ENST00000540022 DCHS1Q96JQ0 3298 aa18.77■□□□□ 0.6
TNFRSF1A-213ENST00000540022 SCN8AQ9UQD0 1980 aa18.77■□□□□ 0.6
TNFRSF1A-213ENST00000540022 NDUFS2O75306 463 aa18.77■□□□□ 0.6
TNFRSF1A-213ENST00000540022 FAM155BO75949 473 aa18.77■□□□□ 0.6
TNFRSF1A-213ENST00000540022 S1PR4O95977 384 aa18.77■□□□□ 0.6
TNFRSF1A-213ENST00000540022 PCCBP05166 539 aa18.77■□□□□ 0.6
TNFRSF1A-213ENST00000540022 GABRB3P28472 473 aa18.77■□□□□ 0.6
TNFRSF1A-213ENST00000540022 GPR1P46091 355 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms