RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 GPR26Q8NDV2 337 aa16.64■□□□□ 0.25
DDB1-215ENST00000539712 TFB1MQ8WVM0 346 aaKnown RBP16.64■□□□□ 0.25
DDB1-215ENST00000539712 ZFYVE1Q9HBF4 777 aa16.64■□□□□ 0.25
DDB1-215ENST00000539712 VPS18Q9P253 973 aa16.64■□□□□ 0.25
DDB1-215ENST00000539712 SHOC2Q9UQ13 582 aa16.64■□□□□ 0.25
DDB1-215ENST00000539712 PRKAB1Q9Y478 270 aa16.64■□□□□ 0.25
DDB1-215ENST00000539712 SPO11Q9Y5K1 396 aa16.64■□□□□ 0.25
DDB1-215ENST00000539712 PLD2O14939 933 aa16.63■□□□□ 0.25
DDB1-215ENST00000539712 AURKAO14965 403 aa16.63■□□□□ 0.25
DDB1-215ENST00000539712 NDUFA10O95299 355 aa16.63■□□□□ 0.25
DDB1-215ENST00000539712 ITGA2BP08514 1039 aa16.63■□□□□ 0.25
DDB1-215ENST00000539712 HGFP14210 728 aa16.63■□□□□ 0.25
DDB1-215ENST00000539712 CD1CP29017 333 aa16.63■□□□□ 0.25
DDB1-215ENST00000539712 UGT1A5P35504 534 aa16.63■□□□□ 0.25
DDB1-215ENST00000539712 ACTR1BP42025 376 aa16.63■□□□□ 0.25
DDB1-215ENST00000539712 MLLT3P42568 568 aaPredicted RBP16.63■□□□□ 0.25
DDB1-215ENST00000539712 ACTR1AP61163 376 aa16.63■□□□□ 0.25
DDB1-215ENST00000539712 SPA17Q15506 151 aa16.63■□□□□ 0.25
DDB1-215ENST00000539712 PCSK7Q16549 785 aa16.63■□□□□ 0.25
DDB1-215ENST00000539712 ODF2Q5BJF6 829 aa16.63■□□□□ 0.25
DDB1-215ENST00000539712 FOXR1Q6PIV2 292 aa16.63■□□□□ 0.25
DDB1-215ENST00000539712 KDELC1Q6UW63 502 aa16.63■□□□□ 0.25
DDB1-215ENST00000539712 RAD9BQ6WBX8 426 aa16.63■□□□□ 0.25
DDB1-215ENST00000539712 RAB11FIP2Q7L804 512 aa16.63■□□□□ 0.25
DDB1-215ENST00000539712 CCHCR1Q8TD31 782 aa16.63■□□□□ 0.25
DDB1-215ENST00000539712 TMEM74Q96NL1 305 aa16.63■□□□□ 0.25
DDB1-215ENST00000539712 LACRTQ9GZZ8 138 aa16.63■□□□□ 0.25
DDB1-215ENST00000539712 CDH19Q9H159 772 aa16.63■□□□□ 0.25
DDB1-215ENST00000539712 SEMA6CQ9H3T2 930 aa16.63■□□□□ 0.25
DDB1-215ENST00000539712 RDH14Q9HBH5 336 aa16.63■□□□□ 0.25
DDB1-215ENST00000539712 EPB41L5Q9HCM4 733 aa16.63■□□□□ 0.25
DDB1-215ENST00000539712 UBP1Q9NZI7 540 aa16.63■□□□□ 0.25
DDB1-215ENST00000539712 PKD2L2Q9NZM6 624 aa16.63■□□□□ 0.25
DDB1-215ENST00000539712 NFKBIL1Q9UBC1 381 aaPredicted RBP16.63■□□□□ 0.25
DDB1-215ENST00000539712 ZNF711Q9Y462 761 aa16.63■□□□□ 0.25
DDB1-215ENST00000539712 ADGRG1Q9Y653 693 aa16.63■□□□□ 0.25
DDB1-215ENST00000539712 SCN8AQ9UQD0 1980 aa16.63■□□□□ 0.25
DDB1-215ENST00000539712 ZFC3H1O60293 1989 aaKnown RBP16.62■□□□□ 0.25
DDB1-215ENST00000539712 LOC285095A0A1B0GVY8 99 aa16.62■□□□□ 0.25
DDB1-215ENST00000539712 TMX2-CTNND1H3BSU7 103 aa16.62■□□□□ 0.25
DDB1-215ENST00000539712 PMPCBO75439 489 aa16.62■□□□□ 0.25
DDB1-215ENST00000539712 NDST3O95803 873 aa16.62■□□□□ 0.25
DDB1-215ENST00000539712 CYLC1P35663 651 aaPredicted RBP16.62■□□□□ 0.25
DDB1-215ENST00000539712 DCDC1P59894 354 aa16.62■□□□□ 0.25
DDB1-215ENST00000539712 CFHR1Q03591 330 aa16.62■□□□□ 0.25
DDB1-215ENST00000539712 EIF3IQ13347 325 aaKnown RBP16.62■□□□□ 0.25
DDB1-215ENST00000539712 LRP8Q14114 963 aa16.62■□□□□ 0.25
DDB1-215ENST00000539712 ZNF648Q5T619 568 aaPredicted RBP16.62■□□□□ 0.25
DDB1-215ENST00000539712 BBS12Q6ZW61 710 aa16.62■□□□□ 0.25
DDB1-215ENST00000539712 USP53Q70EK8 1073 aa16.62■□□□□ 0.25
DDB1-215ENST00000539712 BZW1Q7L1Q6 419 aaKnown RBP16.62■□□□□ 0.25
DDB1-215ENST00000539712 ZC3H18Q86VM9 953 aaKnown RBP16.62■□□□□ 0.25
DDB1-215ENST00000539712 GALNT13Q8IUC8 556 aa16.62■□□□□ 0.25
DDB1-215ENST00000539712 ZNF567Q8N184 647 aa16.62■□□□□ 0.25
DDB1-215ENST00000539712 FBXO39Q8N4B4 442 aa16.62■□□□□ 0.25
DDB1-215ENST00000539712 P3H4Q92791 437 aa16.62■□□□□ 0.25
DDB1-215ENST00000539712 HAUS1Q96CS2 278 aa16.62■□□□□ 0.25
DDB1-215ENST00000539712 OXNAD1Q96HP4 312 aaPredicted RBP16.62■□□□□ 0.25
DDB1-215ENST00000539712 HEMGNQ9BXL5 484 aa16.62■□□□□ 0.25
DDB1-215ENST00000539712 ATXN10Q9UBB4 475 aa16.62■□□□□ 0.25
DDB1-215ENST00000539712 ZNHIT2Q9UHR6 403 aa16.62■□□□□ 0.25
DDB1-215ENST00000539712 TMPRSS11EQ9UL52 423 aa16.62■□□□□ 0.25
DDB1-215ENST00000539712 PCDHGA7Q9Y5G6 932 aa16.62■□□□□ 0.25
DDB1-215ENST00000539712 A6NCN8 305 aa16.61■□□□□ 0.25
DDB1-215ENST00000539712 RHPN2P1A8MT19 583 aa16.61■□□□□ 0.25
DDB1-215ENST00000539712 NUAK1O60285 661 aa16.61■□□□□ 0.25
DDB1-215ENST00000539712 ASMTLO95671 621 aa16.61■□□□□ 0.25
DDB1-215ENST00000539712 BPIP17213 487 aa16.61■□□□□ 0.25
DDB1-215ENST00000539712 NFKB1P19838 968 aa16.61■□□□□ 0.25
DDB1-215ENST00000539712 ALDH4A1P30038 563 aa16.61■□□□□ 0.25
DDB1-215ENST00000539712 GPR3P46089 330 aa16.61■□□□□ 0.25
DDB1-215ENST00000539712 WNT3AP56704 352 aa16.61■□□□□ 0.25
DDB1-215ENST00000539712 SQSTM1Q13501 440 aa16.61■□□□□ 0.25
DDB1-215ENST00000539712 NOMO1Q15155 1222 aa16.61■□□□□ 0.25
DDB1-215ENST00000539712 PPP2R5EQ16537 467 aa16.61■□□□□ 0.25
DDB1-215ENST00000539712 AMZ1Q400G9 498 aa16.61■□□□□ 0.25
DDB1-215ENST00000539712 DAAM2Q86T65 1068 aa16.61■□□□□ 0.25
DDB1-215ENST00000539712 TMTC1Q8IUR5 882 aa16.61■□□□□ 0.25
DDB1-215ENST00000539712 SFRP1Q8N474 314 aa16.61■□□□□ 0.25
DDB1-215ENST00000539712 KCNE4Q8WWG9 221 aa16.61■□□□□ 0.25
DDB1-215ENST00000539712 MRGPRX2Q96LB1 330 aa16.61■□□□□ 0.25
DDB1-215ENST00000539712 FCRL3Q96P31 734 aaPredicted RBP16.61■□□□□ 0.25
DDB1-215ENST00000539712 QKIQ96PU8 341 aaKnown RBP eCLIP16.61■□□□□ 0.25
DDB1-215ENST00000539712 NUDT22Q9BRQ3 303 aa16.61■□□□□ 0.25
DDB1-215ENST00000539712 DPH1Q9BZG8 443 aa16.61■□□□□ 0.25
DDB1-215ENST00000539712 STRADBQ9C0K7 418 aa16.61■□□□□ 0.25
DDB1-215ENST00000539712 C10orf88Q9H8K7 445 aa16.61■□□□□ 0.25
DDB1-215ENST00000539712 ARFGAP3Q9NP61 516 aa16.61■□□□□ 0.25
DDB1-215ENST00000539712 TBC1D29Q9UFV1 150 aa16.61■□□□□ 0.25
DDB1-215ENST00000539712 PCDHA3Q9Y5H8 950 aa16.61■□□□□ 0.25
DDB1-215ENST00000539712 BAHCC1Q9P281 2608 aa16.61■□□□□ 0.25
DDB1-215ENST00000539712 TRBV23OR9-2A0A075B6M9 112 aa16.6■□□□□ 0.25
DDB1-215ENST00000539712 BTNL10A8MVZ5 291 aa16.6■□□□□ 0.25
DDB1-215ENST00000539712 KLK10O43240 276 aa16.6■□□□□ 0.25
DDB1-215ENST00000539712 CPNE6O95741 557 aa16.6■□□□□ 0.25
DDB1-215ENST00000539712 EPOP01588 193 aa16.6■□□□□ 0.25
DDB1-215ENST00000539712 ZNF8P17098 575 aaPredicted RBP16.6■□□□□ 0.25
DDB1-215ENST00000539712 SLC5A2P31639 672 aa16.6■□□□□ 0.25
DDB1-215ENST00000539712 CTNNA1P35221 906 aaKnown RBP16.6■□□□□ 0.25
DDB1-215ENST00000539712 ETV5P41161 510 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms