RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 F7P08709 466 aaPredicted RBP10.11□□□□□ -0.79
SPARC-209ENST00000539687 CYP2A6P11509 494 aaPredicted RBP10.11□□□□□ -0.79
SPARC-209ENST00000539687 GFAPP14136 432 aa10.11□□□□□ -0.79
SPARC-209ENST00000539687 ZNF30P17039 623 aa10.11□□□□□ -0.79
SPARC-209ENST00000539687 POLR2EP19388 210 aaKnown RBP10.11□□□□□ -0.79
SPARC-209ENST00000539687 SP100P23497 879 aaPredicted RBP10.11□□□□□ -0.79
SPARC-209ENST00000539687 CD70P32970 193 aa10.11□□□□□ -0.79
SPARC-209ENST00000539687 ATP4BP51164 291 aa10.11□□□□□ -0.79
SPARC-209ENST00000539687 KDSRQ06136 332 aa10.11□□□□□ -0.79
SPARC-209ENST00000539687 PEX6Q13608 980 aa10.11□□□□□ -0.79
SPARC-209ENST00000539687 SQLEQ14534 574 aa10.11□□□□□ -0.79
SPARC-209ENST00000539687 SEMA3AQ14563 771 aa10.11□□□□□ -0.79
SPARC-209ENST00000539687 NAA25Q14CX7 972 aa10.11□□□□□ -0.79
SPARC-209ENST00000539687 PRSS36Q5K4E3 855 aa10.11□□□□□ -0.79
SPARC-209ENST00000539687 ATXN7L2Q5T6C5 722 aaPredicted RBP10.11□□□□□ -0.79
SPARC-209ENST00000539687 ANKS6Q68DC2 871 aa10.11□□□□□ -0.79
SPARC-209ENST00000539687 PTRHD1Q6GMV3 140 aaKnown RBP10.11□□□□□ -0.79
SPARC-209ENST00000539687 METTL2BQ6P1Q9 378 aaKnown RBP10.11□□□□□ -0.79
SPARC-209ENST00000539687 BRAT1Q6PJG6 821 aa10.11□□□□□ -0.79
SPARC-209ENST00000539687 LYSMD3Q7Z3D4 306 aa10.11□□□□□ -0.79
SPARC-209ENST00000539687 NET1Q7Z628 596 aaPredicted RBP10.11□□□□□ -0.79
SPARC-209ENST00000539687 ADAMTSL2Q86TH1 951 aa10.11□□□□□ -0.79
SPARC-209ENST00000539687 LDB1Q86U70 411 aaPredicted RBP10.11□□□□□ -0.79
SPARC-209ENST00000539687 CAMK1DQ8IU85 385 aa10.11□□□□□ -0.79
SPARC-209ENST00000539687 RAVER1Q8IY67 606 aaKnown RBP10.11□□□□□ -0.79
SPARC-209ENST00000539687 CLYBLQ8N0X4 340 aa10.11□□□□□ -0.79
SPARC-209ENST00000539687 LSMEM2Q8N112 164 aa10.11□□□□□ -0.79
SPARC-209ENST00000539687 FBXO39Q8N4B4 442 aa10.11□□□□□ -0.79
SPARC-209ENST00000539687 CELF5Q8N6W0 485 aaKnown RBP10.11□□□□□ -0.79
SPARC-209ENST00000539687 KDM1BQ8NB78 822 aa10.11□□□□□ -0.79
SPARC-209ENST00000539687 FAM13CQ8NE31 585 aa10.11□□□□□ -0.79
SPARC-209ENST00000539687 WFDC5Q8TCV5 224 aa10.11□□□□□ -0.79
SPARC-209ENST00000539687 ANKRD49Q8WVL7 239 aa10.11□□□□□ -0.79
SPARC-209ENST00000539687 SGF29Q96ES7 293 aa10.11□□□□□ -0.79
SPARC-209ENST00000539687 ASIC4Q96FT7 647 aa10.11□□□□□ -0.79
SPARC-209ENST00000539687 SCRN2Q96FV2 425 aa10.11□□□□□ -0.79
SPARC-209ENST00000539687 PLEKHG4BQ96PX9 1271 aa10.11□□□□□ -0.79
SPARC-209ENST00000539687 PANX3Q96QZ0 392 aa10.11□□□□□ -0.79
SPARC-209ENST00000539687 SERPINI1Q99574 410 aa10.11□□□□□ -0.79
SPARC-209ENST00000539687 RTKNQ9BST9 563 aa10.11□□□□□ -0.79
SPARC-209ENST00000539687 C1QTNF3Q9BXJ4 246 aa10.11□□□□□ -0.79
SPARC-209ENST00000539687 CADM1Q9BY67 442 aaKnown RBP10.11□□□□□ -0.79
SPARC-209ENST00000539687 P2RY12Q9H244 342 aa10.11□□□□□ -0.79
SPARC-209ENST00000539687 SUV39H2Q9H5I1 410 aa10.11□□□□□ -0.79
SPARC-209ENST00000539687 DCLRE1BQ9H816 532 aa10.11□□□□□ -0.79
SPARC-209ENST00000539687 MEAF6Q9HAF1 191 aa10.11□□□□□ -0.79
SPARC-209ENST00000539687 NUDT4Q9NZJ9 180 aa10.11□□□□□ -0.79
SPARC-209ENST00000539687 NOP53Q9NZM5 478 aaKnown RBP10.11□□□□□ -0.79
SPARC-209ENST00000539687 CXXC1Q9P0U4 656 aaPredicted RBP10.11□□□□□ -0.79
SPARC-209ENST00000539687 HECAQ9UBI9 543 aaPredicted RBP10.11□□□□□ -0.79
SPARC-209ENST00000539687 ZDHHC2Q9UIJ5 367 aa10.11□□□□□ -0.79
SPARC-209ENST00000539687 PRPF19Q9UMS4 504 aaKnown RBP10.11□□□□□ -0.79
SPARC-209ENST00000539687 TNPO3Q9Y5L0 923 aaKnown RBP10.11□□□□□ -0.79
SPARC-209ENST00000539687 DENND4CQ5VZ89 1909 aa10.11□□□□□ -0.79
SPARC-209ENST00000539687 SUPT3HB4E1H0 165 aa10.1□□□□□ -0.79
SPARC-209ENST00000539687 NEDD8-MDP1E9PL57 170 aa10.1□□□□□ -0.79
SPARC-209ENST00000539687 QSOX1O00391 747 aa10.1□□□□□ -0.79
SPARC-209ENST00000539687 GRID2O43424 1007 aa10.1□□□□□ -0.79
SPARC-209ENST00000539687 ZBTB14O43829 449 aa10.1□□□□□ -0.79
SPARC-209ENST00000539687 KLK8O60259 260 aa10.1□□□□□ -0.79
SPARC-209ENST00000539687 SUPT3HO75486 399 aa10.1□□□□□ -0.79
SPARC-209ENST00000539687 GPC4O75487 556 aa10.1□□□□□ -0.79
SPARC-209ENST00000539687 PAPLNO95428 1278 aa10.1□□□□□ -0.79
SPARC-209ENST00000539687 PRAMEF1O95521 474 aa10.1□□□□□ -0.79
SPARC-209ENST00000539687 CHEK2O96017 543 aa10.1□□□□□ -0.79
SPARC-209ENST00000539687 ADH1CP00326 375 aa10.1□□□□□ -0.79
SPARC-209ENST00000539687 MT-CO1P00395 513 aa10.1□□□□□ -0.79
SPARC-209ENST00000539687 CBSLP0DN79 551 aa10.1□□□□□ -0.79
SPARC-209ENST00000539687 TYRP14679 529 aa10.1□□□□□ -0.79
SPARC-209ENST00000539687 CHRM3P20309 590 aa10.1□□□□□ -0.79
SPARC-209ENST00000539687 DGKAP23743 735 aa10.1□□□□□ -0.79
SPARC-209ENST00000539687 HLA-FP30511 346 aa10.1□□□□□ -0.79
SPARC-209ENST00000539687 ARRB2P32121 409 aa10.1□□□□□ -0.79
SPARC-209ENST00000539687 CBSP35520 551 aa10.1□□□□□ -0.79
SPARC-209ENST00000539687 GMPRP36959 345 aa10.1□□□□□ -0.79
SPARC-209ENST00000539687 XIAPP98170 497 aa10.1□□□□□ -0.79
SPARC-209ENST00000539687 LCP2Q13094 533 aa10.1□□□□□ -0.79
SPARC-209ENST00000539687 KLF10Q13118 480 aa10.1□□□□□ -0.79
SPARC-209ENST00000539687 NFATC2Q13469 925 aa10.1□□□□□ -0.79
SPARC-209ENST00000539687 UBAP2LQ14157 1087 aaKnown RBP10.1□□□□□ -0.79
SPARC-209ENST00000539687 E2F5Q15329 346 aa10.1□□□□□ -0.79
SPARC-209ENST00000539687 SLC9B1Q4ZJI4 515 aa10.1□□□□□ -0.79
SPARC-209ENST00000539687 TTC23LQ6PF05 361 aa10.1□□□□□ -0.79
SPARC-209ENST00000539687 PAQR3Q6TCH7 311 aa10.1□□□□□ -0.79
SPARC-209ENST00000539687 TMEM207Q6UWW9 146 aa10.1□□□□□ -0.79
SPARC-209ENST00000539687 RINLQ6ZS11 566 aa10.1□□□□□ -0.79
SPARC-209ENST00000539687 KIAA0907Q7Z7F0 614 aaPredicted RBP10.1□□□□□ -0.79
SPARC-209ENST00000539687 PIM3Q86V86 326 aa10.1□□□□□ -0.79
SPARC-209ENST00000539687 TREML1Q86YW5 311 aa10.1□□□□□ -0.79
SPARC-209ENST00000539687 SCUBE1Q8IWY4 988 aa10.1□□□□□ -0.79
SPARC-209ENST00000539687 C7orf61Q8IZ16 206 aa10.1□□□□□ -0.79
SPARC-209ENST00000539687 PTGR2Q8N8N7 351 aaPredicted RBP10.1□□□□□ -0.79
SPARC-209ENST00000539687 ENDOVQ8N8Q3 282 aaKnown RBP10.1□□□□□ -0.79
SPARC-209ENST00000539687 TTC16Q8NEE8 873 aa10.1□□□□□ -0.79
SPARC-209ENST00000539687 JADE3Q92613 823 aa10.1□□□□□ -0.79
SPARC-209ENST00000539687 UTP4Q969X6 686 aaKnown RBP10.1□□□□□ -0.79
SPARC-209ENST00000539687 MCCC1Q96RQ3 725 aaPredicted RBP10.1□□□□□ -0.79
SPARC-209ENST00000539687 ATOH8Q96SQ7 321 aa10.1□□□□□ -0.79
SPARC-209ENST00000539687 CDCA3Q99618 268 aaPredicted RBP10.1□□□□□ -0.79
SPARC-209ENST00000539687 GPR21Q99679 349 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms