RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 CDKN2BP42772 138 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 CDK9P50750 372 aaKnown RBP6.46□□□□□ -1.38
LSAMP-207ENST00000539563 LARS2Q15031 903 aaKnown RBP6.46□□□□□ -1.38
LSAMP-207ENST00000539563 SPESP1Q6UW49 350 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 CUZD1Q86UP6 607 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 ALYREFQ86V81 257 aaKnown RBP6.46□□□□□ -1.38
LSAMP-207ENST00000539563 CNTD1Q8N815 330 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 NAT16Q8N8M0 369 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 AGAP11Q8TF27 550 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 WDR12Q9GZL7 423 aaKnown RBP6.46□□□□□ -1.38
LSAMP-207ENST00000539563 CLIC5Q9NZA1 410 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 ITGB1BP2Q9UKP3 347 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 TMEM88BA6NKF7 163 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 MCIDASD6RGH6 385 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 FPGTO14772 594 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 EPHB6O15197 1021 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 CHST10O43529 356 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 BANF1O75531 89 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 USP2O75604 605 aaPredicted RBP6.46□□□□□ -1.38
LSAMP-207ENST00000539563 SEC24AO95486 1093 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 ADSLP30566 484 aaPredicted RBP6.46□□□□□ -1.38
LSAMP-207ENST00000539563 FAUP35544 74 aaKnown RBP6.46□□□□□ -1.38
LSAMP-207ENST00000539563 SLC26A3P40879 764 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 MTHFRP42898 656 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 BRCC3P46736 316 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 GNPDA1P46926 289 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 FLT3LGP49771 235 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 ACLYP53396 1101 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 HADHBP55084 474 aaKnown RBP6.46□□□□□ -1.38
LSAMP-207ENST00000539563 PRMT2P55345 433 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 JAM2P57087 298 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 SCIMPQ6UWF3 145 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 NKD2Q969F2 451 aaPredicted RBP6.46□□□□□ -1.38
LSAMP-207ENST00000539563 CLIP3Q96DZ5 547 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 BTBD9Q96Q07 612 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 HAPLN3Q96S86 360 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 MIOSQ9NXC5 875 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 CFAP97Q9P2B7 532 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 RAPGEFL1Q9UHV5 662 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 IRAK3Q9Y616 596 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 NID2Q14112 1375 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 TBC1D3DA0A087WVF3 549 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 TBC1D3IA0A087WXS9 549 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 TBC1D3EA0A087X179 549 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 TBC1D3KA0A087X1G2 549 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 ABHD14A-ACY1A0A1B0GW23 586 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 TBC1D3FA6NER0 549 aaPredicted RBP6.46□□□□□ -1.38
LSAMP-207ENST00000539563 TBC1D3LB9A6J9 549 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 DHX15O43143 795 aaKnown RBP6.46□□□□□ -1.38
LSAMP-207ENST00000539563 CST3P01034 146 aaPredicted RBP6.46□□□□□ -1.38
LSAMP-207ENST00000539563 C2P06681 752 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 C8GP07360 202 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 TBC1D3HP0C7X1 549 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 TACR2P21452 398 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 EPHA3P29320 983 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 PBX1P40424 430 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 SSR2P43308 183 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 ERVK-21P61565 698 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 MYBPC1Q00872 1141 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 C2orf80Q0P641 193 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 DGCR6Q14129 220 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 KCNA10Q16322 511 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 ATP13A5Q4VNC0 1218 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 METTL21CQ5VZV1 264 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 TBC1D3GQ6DHY5 549 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 TBC1D3CQ6IPX1 549 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 LBX2Q6XYB7 198 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 SLC30A8Q8IWU4 369 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 TBC1D3Q8IZP1 549 aaPredicted RBP6.46□□□□□ -1.38
LSAMP-207ENST00000539563 ZBTB2Q8N680 514 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 CPSF7Q8N684 471 aaKnown RBP6.46□□□□□ -1.38
LSAMP-207ENST00000539563 OR4K2Q8NGD2 314 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 OR10G6Q8NH81 332 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 TNFRSF25Q93038 417 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 C1QTNF1Q9BXJ1 281 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 PDZD7Q9H5P4 517 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 DNAJC11Q9NVH1 559 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 DEC1Q9P2X7 70 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 A0A1B0GVM2 712 aa6.45□□□□□ -1.38
LSAMP-207ENST00000539563 TCAF2A6NFQ2 919 aa6.45□□□□□ -1.38
LSAMP-207ENST00000539563 HAT1O14929 419 aa6.45□□□□□ -1.38
LSAMP-207ENST00000539563 C22orf31O95567 290 aa6.45□□□□□ -1.38
LSAMP-207ENST00000539563 HNRNPLP14866 589 aaKnown RBP eCLIP6.45□□□□□ -1.38
LSAMP-207ENST00000539563 IL10RBQ08334 325 aa6.45□□□□□ -1.38
LSAMP-207ENST00000539563 RFTN1Q14699 578 aaPredicted RBP6.45□□□□□ -1.38
LSAMP-207ENST00000539563 ATXN7L2Q5T6C5 722 aaPredicted RBP6.45□□□□□ -1.38
LSAMP-207ENST00000539563 BEND5Q7L4P6 421 aa6.45□□□□□ -1.38
LSAMP-207ENST00000539563 PLEKHG4BQ96PX9 1271 aa6.45□□□□□ -1.38
LSAMP-207ENST00000539563 MTRRQ9UBK8 725 aa6.45□□□□□ -1.38
LSAMP-207ENST00000539563 NAV1Q8NEY1 1877 aa6.45□□□□□ -1.38
LSAMP-207ENST00000539563 TSPAN1O60635 241 aa6.45□□□□□ -1.38
LSAMP-207ENST00000539563 PRKAR1AP10644 381 aa6.45□□□□□ -1.38
LSAMP-207ENST00000539563 ACADLP28330 430 aa6.45□□□□□ -1.38
LSAMP-207ENST00000539563 BCAP31P51572 246 aa6.45□□□□□ -1.38
LSAMP-207ENST00000539563 USP4Q13107 963 aa6.45□□□□□ -1.38
LSAMP-207ENST00000539563 LDLRAP1Q5SW96 308 aa6.45□□□□□ -1.38
LSAMP-207ENST00000539563 CCNYL2Q5T2Q4 361 aa6.45□□□□□ -1.38
LSAMP-207ENST00000539563 C9orf64Q5T6V5 341 aa6.45□□□□□ -1.38
LSAMP-207ENST00000539563 RNASEH2BQ5TBB1 312 aaKnown RBP6.45□□□□□ -1.38
LSAMP-207ENST00000539563 SDHAF4Q5VUM1 108 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms