RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 ZFP69Q49AA0 526 aa4.69□□□□□ -1.66
CCDC7-209ENST00000539197 FBXO47Q5MNV8 452 aa4.69□□□□□ -1.66
CCDC7-209ENST00000539197 MAP3K21Q5TCX8 1036 aa4.69□□□□□ -1.66
CCDC7-209ENST00000539197 PQLC2Q6ZP29 291 aa4.69□□□□□ -1.66
CCDC7-209ENST00000539197 GPR180Q86V85 440 aa4.69□□□□□ -1.66
CCDC7-209ENST00000539197 SLC44A1Q8WWI5 657 aa4.69□□□□□ -1.66
CCDC7-209ENST00000539197 ZNF653Q96CK0 615 aa4.69□□□□□ -1.66
CCDC7-209ENST00000539197 ARHGEF26Q96DR7 871 aa4.69□□□□□ -1.66
CCDC7-209ENST00000539197 MPHOSPH8Q99549 860 aa4.69□□□□□ -1.66
CCDC7-209ENST00000539197 IFIH1Q9BYX4 1025 aaKnown RBP4.69□□□□□ -1.66
CCDC7-209ENST00000539197 TRIM15Q9C019 465 aa4.69□□□□□ -1.66
CCDC7-209ENST00000539197 INTS2Q9H0H0 1204 aaKnown RBP4.69□□□□□ -1.66
CCDC7-209ENST00000539197 BICC1Q9H694 974 aaKnown RBP4.69□□□□□ -1.66
CCDC7-209ENST00000539197 SLC7A10Q9NS82 523 aa4.69□□□□□ -1.66
CCDC7-209ENST00000539197 ZDHHC18Q9NUE0 388 aa4.69□□□□□ -1.66
CCDC7-209ENST00000539197 KLHL20Q9Y2M5 609 aa4.69□□□□□ -1.66
CCDC7-209ENST00000539197 CEPT1Q9Y6K0 416 aa4.69□□□□□ -1.66
CCDC7-209ENST00000539197 A0A0J9YWU9 116 aa4.68□□□□□ -1.66
CCDC7-209ENST00000539197 GUCY1B2O75343 617 aa4.68□□□□□ -1.66
CCDC7-209ENST00000539197 HOXA13P31271 388 aaPredicted RBP4.68□□□□□ -1.66
CCDC7-209ENST00000539197 AHRP35869 848 aa4.68□□□□□ -1.66
CCDC7-209ENST00000539197 GABRB2P47870 512 aa4.68□□□□□ -1.66
CCDC7-209ENST00000539197 ARCN1P48444 511 aaKnown RBP4.68□□□□□ -1.66
CCDC7-209ENST00000539197 CCR5P51681 352 aa4.68□□□□□ -1.66
CCDC7-209ENST00000539197 ARL4CP56559 192 aa4.68□□□□□ -1.66
CCDC7-209ENST00000539197 SIGIRRQ6IA17 410 aa4.68□□□□□ -1.66
CCDC7-209ENST00000539197 BBS12Q6ZW61 710 aa4.68□□□□□ -1.66
CCDC7-209ENST00000539197 RRM2BQ7LG56 351 aa4.68□□□□□ -1.66
CCDC7-209ENST00000539197 NRROSQ86YC3 692 aa4.68□□□□□ -1.66
CCDC7-209ENST00000539197 RBM15BQ8NDT2 890 aaKnown RBP4.68□□□□□ -1.66
CCDC7-209ENST00000539197 THAP6Q8TBB0 222 aa4.68□□□□□ -1.66
CCDC7-209ENST00000539197 TAAR8Q969N4 342 aa4.68□□□□□ -1.66
CCDC7-209ENST00000539197 EIF2AK1Q9BQI3 630 aaKnown RBP4.68□□□□□ -1.66
CCDC7-209ENST00000539197 PYM1Q9BRP8 204 aaKnown RBP4.68□□□□□ -1.66
CCDC7-209ENST00000539197 H2AFJQ9BTM1 129 aa4.68□□□□□ -1.66
CCDC7-209ENST00000539197 HCN3Q9P1Z3 774 aa4.68□□□□□ -1.66
CCDC7-209ENST00000539197 IGKV6D-41A0A0C4DH26 115 aa4.67□□□□□ -1.66
CCDC7-209ENST00000539197 TEX13CA0A0J9YWL9 993 aa4.67□□□□□ -1.66
CCDC7-209ENST00000539197 C5orf60A6NFR6 353 aa4.67□□□□□ -1.66
CCDC7-209ENST00000539197 TAF4O00268 1085 aa4.67□□□□□ -1.66
CCDC7-209ENST00000539197 NCAM2O15394 837 aa4.67□□□□□ -1.66
CCDC7-209ENST00000539197 MAP2K2P36507 400 aa4.67□□□□□ -1.66
CCDC7-209ENST00000539197 PGM1P36871 562 aa4.67□□□□□ -1.66
CCDC7-209ENST00000539197 CLDN20P56880 219 aa4.67□□□□□ -1.66
CCDC7-209ENST00000539197 UFM1P61960 85 aa4.67□□□□□ -1.66
CCDC7-209ENST00000539197 SPOCK1Q08629 439 aa4.67□□□□□ -1.66
CCDC7-209ENST00000539197 COL28A1Q2UY09 1125 aa4.67□□□□□ -1.66
CCDC7-209ENST00000539197 ZC2HC1CQ53FD0 456 aaPredicted RBP4.67□□□□□ -1.66
CCDC7-209ENST00000539197 ZNF790Q6PG37 636 aa4.67□□□□□ -1.66
CCDC7-209ENST00000539197 MAP7D3Q8IWC1 876 aa4.67□□□□□ -1.66
CCDC7-209ENST00000539197 ENAHQ8N8S7 591 aaPredicted RBP4.67□□□□□ -1.66
CCDC7-209ENST00000539197 KLHL15Q96M94 604 aa4.67□□□□□ -1.66
CCDC7-209ENST00000539197 INTS10Q9NVR2 710 aaKnown RBP4.67□□□□□ -1.66
CCDC7-209ENST00000539197 C2orf42Q9NWW7 574 aa4.67□□□□□ -1.66
CCDC7-209ENST00000539197 MARCH4Q9P2E8 410 aaPredicted RBP4.67□□□□□ -1.66
CCDC7-209ENST00000539197 CNOT7Q9UIV1 285 aaKnown RBP4.67□□□□□ -1.66
CCDC7-209ENST00000539197 SH2B2O14492 632 aaPredicted RBP4.66□□□□□ -1.66
CCDC7-209ENST00000539197 MLYCDO95822 493 aa4.66□□□□□ -1.66
CCDC7-209ENST00000539197 CSF2RAP15509 400 aa4.66□□□□□ -1.66
CCDC7-209ENST00000539197 TCTE1Q5JU00 501 aa4.66□□□□□ -1.66
CCDC7-209ENST00000539197 C10orf62Q5T681 223 aaPredicted RBP4.66□□□□□ -1.66
CCDC7-209ENST00000539197 FAAP20Q6NZ36 180 aa4.66□□□□□ -1.66
CCDC7-209ENST00000539197 PLEKHM3Q6ZWE6 761 aa4.66□□□□□ -1.66
CCDC7-209ENST00000539197 CPOQ8IVL8 374 aa4.66□□□□□ -1.66
CCDC7-209ENST00000539197 ZNF473Q8WTR7 871 aaKnown RBP4.66□□□□□ -1.66
CCDC7-209ENST00000539197 FGF22Q9HCT0 170 aa4.66□□□□□ -1.66
CCDC7-209ENST00000539197 ACSS1Q9NUB1 689 aaPredicted RBP4.66□□□□□ -1.66
CCDC7-209ENST00000539197 CACNG5Q9UF02 275 aa4.66□□□□□ -1.66
CCDC7-209ENST00000539197 A4GNTQ9UNA3 340 aa4.66□□□□□ -1.66
CCDC7-209ENST00000539197 PCDHGB3Q9Y5G1 929 aa4.66□□□□□ -1.66
CCDC7-209ENST00000539197 SCINQ9Y6U3 715 aa4.66□□□□□ -1.66
CCDC7-209ENST00000539197 SMCHD1A6NHR9 2005 aa4.66□□□□□ -1.66
CCDC7-209ENST00000539197 UTYO14607 1347 aa4.66□□□□□ -1.66
CCDC7-209ENST00000539197 GAGE10A6NGK3 116 aa4.65□□□□□ -1.67
CCDC7-209ENST00000539197 LDLRAD4O15165 306 aa4.65□□□□□ -1.67
CCDC7-209ENST00000539197 CLIC2O15247 247 aa4.65□□□□□ -1.67
CCDC7-209ENST00000539197 SEC31AO94979 1220 aaKnown RBP4.65□□□□□ -1.67
CCDC7-209ENST00000539197 CSRP3P50461 194 aa4.65□□□□□ -1.67
CCDC7-209ENST00000539197 DCST1Q5T197 706 aa4.65□□□□□ -1.67
CCDC7-209ENST00000539197 C18orf63Q68DL7 685 aa4.65□□□□□ -1.67
CCDC7-209ENST00000539197 SPINK14Q6IE38 97 aa4.65□□□□□ -1.67
CCDC7-209ENST00000539197 PIWIL4Q7Z3Z4 852 aaKnown RBP4.65□□□□□ -1.67
CCDC7-209ENST00000539197 CCDC13Q8IYE1 715 aa4.65□□□□□ -1.67
CCDC7-209ENST00000539197 SAMD3Q8N6K7 520 aa4.65□□□□□ -1.67
CCDC7-209ENST00000539197 CCT6BQ92526 530 aa4.65□□□□□ -1.67
CCDC7-209ENST00000539197 APBB2Q92870 758 aa4.65□□□□□ -1.67
CCDC7-209ENST00000539197 PPP1R13BQ96KQ4 1090 aa4.65□□□□□ -1.67
CCDC7-209ENST00000539197 TCP11L1Q9NUJ3 509 aa4.65□□□□□ -1.67
CCDC7-209ENST00000539197 ADPRHL2Q9NX46 363 aa4.65□□□□□ -1.67
CCDC7-209ENST00000539197 FBXL2Q9UKC9 423 aa4.65□□□□□ -1.67
CCDC7-209ENST00000539197 JRKLQ9Y4A0 524 aa4.65□□□□□ -1.67
CCDC7-209ENST00000539197 DUXAA6NLW8 204 aa4.64□□□□□ -1.67
CCDC7-209ENST00000539197 TCERG1O14776 1098 aaKnown RBP4.64□□□□□ -1.67
CCDC7-209ENST00000539197 NBNO60934 754 aa4.64□□□□□ -1.67
CCDC7-209ENST00000539197 SORBS2O94875 1100 aaKnown RBP4.64□□□□□ -1.67
CCDC7-209ENST00000539197 TSHBP01222 138 aa4.64□□□□□ -1.67
CCDC7-209ENST00000539197 GGT5P36269 586 aa4.64□□□□□ -1.67
CCDC7-209ENST00000539197 GNAQP50148 359 aa4.64□□□□□ -1.67
CCDC7-209ENST00000539197 MLLT10P55197 1068 aa4.64□□□□□ -1.67
CCDC7-209ENST00000539197 DECR1Q16698 335 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms