RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 PPIL1Q9Y3C6 166 aa14.72□□□□□ -0.05
ATL3-203ENST00000538786 PCDHB1Q9Y5F3 818 aa14.72□□□□□ -0.05
ATL3-203ENST00000538786 WNT6Q9Y6F9 365 aa14.72□□□□□ -0.05
ATL3-203ENST00000538786 GOLGA8QA0A0J9YX86 632 aa14.72□□□□□ -0.05
ATL3-203ENST00000538786 GOLGA8OA6NCC3 632 aa14.72□□□□□ -0.05
ATL3-203ENST00000538786 TMEM233B4DJY2 109 aa14.72□□□□□ -0.05
ATL3-203ENST00000538786 GOLGA8NF8WBI6 632 aa14.72□□□□□ -0.05
ATL3-203ENST00000538786 GAPDHSO14556 408 aaPredicted RBP14.72□□□□□ -0.05
ATL3-203ENST00000538786 DCXO43602 365 aa14.72□□□□□ -0.05
ATL3-203ENST00000538786 NIPSNAP2O75323 286 aa14.72□□□□□ -0.05
ATL3-203ENST00000538786 CA3P07451 260 aa14.72□□□□□ -0.05
ATL3-203ENST00000538786 MTHFD2P13995 350 aa14.72□□□□□ -0.05
ATL3-203ENST00000538786 EPHA3P29320 983 aa14.72□□□□□ -0.05
ATL3-203ENST00000538786 CCNHP51946 323 aaPredicted RBP14.72□□□□□ -0.05
ATL3-203ENST00000538786 FAM151BQ6UXP7 276 aa14.72□□□□□ -0.05
ATL3-203ENST00000538786 DPY19L3Q6ZPD9 716 aa14.72□□□□□ -0.05
ATL3-203ENST00000538786 SNX20Q7Z614 316 aa14.72□□□□□ -0.05
ATL3-203ENST00000538786 RAB44Q7Z6P3 723 aaPredicted RBP14.72□□□□□ -0.05
ATL3-203ENST00000538786 KIAA0907Q7Z7F0 614 aaPredicted RBP14.72□□□□□ -0.05
ATL3-203ENST00000538786 CUZD1Q86UP6 607 aa14.72□□□□□ -0.05
ATL3-203ENST00000538786 ARHGAP24Q8N264 748 aa14.72□□□□□ -0.05
ATL3-203ENST00000538786 CBARPQ8N350 705 aaPredicted RBP14.72□□□□□ -0.05
ATL3-203ENST00000538786 CMTM5Q96DZ9 223 aa14.72□□□□□ -0.05
ATL3-203ENST00000538786 SCRN2Q96FV2 425 aa14.72□□□□□ -0.05
ATL3-203ENST00000538786 ZNF641Q96N77 438 aaPredicted RBP14.72□□□□□ -0.05
ATL3-203ENST00000538786 TTC1Q99614 292 aa14.72□□□□□ -0.05
ATL3-203ENST00000538786 IL26Q9NPH9 171 aa14.72□□□□□ -0.05
ATL3-203ENST00000538786 GALPQ9UBC7 116 aa14.72□□□□□ -0.05
ATL3-203ENST00000538786 SLCO3A1Q9UIG8 710 aa14.72□□□□□ -0.05
ATL3-203ENST00000538786 MRPS23Q9Y3D9 190 aaKnown RBP14.72□□□□□ -0.05
ATL3-203ENST00000538786 GOLGA8CPA6NN73 597 aa14.71□□□□□ -0.05
ATL3-203ENST00000538786 GRXCR1A8MXD5 290 aa14.71□□□□□ -0.05
ATL3-203ENST00000538786 E5RI56 91 aa14.71□□□□□ -0.05
ATL3-203ENST00000538786 NEMP1O14524 444 aa14.71□□□□□ -0.05
ATL3-203ENST00000538786 PRMT5O14744 637 aaPredicted RBP14.71□□□□□ -0.05
ATL3-203ENST00000538786 GPR39O43194 453 aa14.71□□□□□ -0.05
ATL3-203ENST00000538786 JUNP05412 331 aaKnown RBP14.71□□□□□ -0.05
ATL3-203ENST00000538786 ITGALP20701 1170 aa14.71□□□□□ -0.05
ATL3-203ENST00000538786 PRDX6P30041 224 aa14.71□□□□□ -0.05
ATL3-203ENST00000538786 PTPN5P54829 565 aa14.71□□□□□ -0.05
ATL3-203ENST00000538786 NFATC2Q13469 925 aa14.71□□□□□ -0.05
ATL3-203ENST00000538786 CBX2Q14781 532 aaPredicted RBP14.71□□□□□ -0.05
ATL3-203ENST00000538786 PDCD2Q16342 344 aaPredicted RBP14.71□□□□□ -0.05
ATL3-203ENST00000538786 DNAL1Q4LDG9 190 aa14.71□□□□□ -0.05
ATL3-203ENST00000538786 UNC50Q53HI1 259 aa14.71□□□□□ -0.05
ATL3-203ENST00000538786 WASHC2DQ5SRD0 308 aa14.71□□□□□ -0.05
ATL3-203ENST00000538786 LYPLAL1Q5VWZ2 237 aa14.71□□□□□ -0.05
ATL3-203ENST00000538786 GRAMD4Q6IC98 578 aa14.71□□□□□ -0.05
ATL3-203ENST00000538786 UGT3A1Q6NUS8 523 aa14.71□□□□□ -0.05
ATL3-203ENST00000538786 TPRG1Q6ZUI0 275 aa14.71□□□□□ -0.05
ATL3-203ENST00000538786 RBM23Q86U06 439 aaKnown RBP14.71□□□□□ -0.05
ATL3-203ENST00000538786 PLPP6Q8IY26 295 aa14.71□□□□□ -0.05
ATL3-203ENST00000538786 AHI1Q8N157 1196 aa14.71□□□□□ -0.05
ATL3-203ENST00000538786 PHTF2Q8N3S3 785 aa14.71□□□□□ -0.05
ATL3-203ENST00000538786 PTGR2Q8N8N7 351 aaPredicted RBP14.71□□□□□ -0.05
ATL3-203ENST00000538786 SIDT2Q8NBJ9 832 aaKnown RBP14.71□□□□□ -0.05
ATL3-203ENST00000538786 FBXO27Q8NI29 283 aa14.71□□□□□ -0.05
ATL3-203ENST00000538786 CD200R1Q8TD46 325 aa14.71□□□□□ -0.05
ATL3-203ENST00000538786 EXT2Q93063 718 aa14.71□□□□□ -0.05
ATL3-203ENST00000538786 MAELQ96JY0 434 aaKnown RBP14.71□□□□□ -0.05
ATL3-203ENST00000538786 ASB2Q96Q27 587 aa14.71□□□□□ -0.05
ATL3-203ENST00000538786 SLC30A3Q99726 388 aa14.71□□□□□ -0.05
ATL3-203ENST00000538786 OSBPL1AQ9BXW6 950 aa14.71□□□□□ -0.05
ATL3-203ENST00000538786 RNF112Q9ULX5 631 aa14.71□□□□□ -0.05
ATL3-203ENST00000538786 ANKRD36A6QL64 1941 aa14.71□□□□□ -0.05
ATL3-203ENST00000538786 TRBV5-4A0A0C4DH59 114 aa14.7□□□□□ -0.06
ATL3-203ENST00000538786 GLYATL1P3A0A0U1RQE8 302 aa14.7□□□□□ -0.06
ATL3-203ENST00000538786 A0A1W2PQ67 120 aa14.7□□□□□ -0.06
ATL3-203ENST00000538786 NPIPB15A6NHN6 443 aaPredicted RBP14.7□□□□□ -0.06
ATL3-203ENST00000538786 SYCE1LA8MT33 242 aa14.7□□□□□ -0.06
ATL3-203ENST00000538786 UBXN8O00124 270 aa14.7□□□□□ -0.06
ATL3-203ENST00000538786 BNIP3LO60238 219 aa14.7□□□□□ -0.06
ATL3-203ENST00000538786 MAGEC1O60732 1142 aa14.7□□□□□ -0.06
ATL3-203ENST00000538786 SUPT7LO94864 414 aa14.7□□□□□ -0.06
ATL3-203ENST00000538786 TSPAN12O95859 305 aa14.7□□□□□ -0.06
ATL3-203ENST00000538786 ZNF7P17097 686 aaPredicted RBP14.7□□□□□ -0.06
ATL3-203ENST00000538786 BPIP17213 487 aa14.7□□□□□ -0.06
ATL3-203ENST00000538786 CHRM3P20309 590 aa14.7□□□□□ -0.06
ATL3-203ENST00000538786 RPS3P23396 243 aaKnown RBP eCLIP14.7□□□□□ -0.06
ATL3-203ENST00000538786 PGM1P36871 562 aa14.7□□□□□ -0.06
ATL3-203ENST00000538786 SPAM1P38567 509 aa14.7□□□□□ -0.06
ATL3-203ENST00000538786 COPAP53621 1224 aa14.7□□□□□ -0.06
ATL3-203ENST00000538786 IL2P60568 153 aa14.7□□□□□ -0.06
ATL3-203ENST00000538786 SATB1Q01826 763 aa14.7□□□□□ -0.06
ATL3-203ENST00000538786 KLF10Q13118 480 aa14.7□□□□□ -0.06
ATL3-203ENST00000538786 GPM6BQ13491 265 aa14.7□□□□□ -0.06
ATL3-203ENST00000538786 TSNQ15631 228 aaKnown RBP14.7□□□□□ -0.06
ATL3-203ENST00000538786 PFKFB4Q16877 469 aa14.7□□□□□ -0.06
ATL3-203ENST00000538786 FAM109BQ6ICB4 259 aaPredicted RBP14.7□□□□□ -0.06
ATL3-203ENST00000538786 CRTC1Q6UUV9 634 aa14.7□□□□□ -0.06
ATL3-203ENST00000538786 USP45Q70EL2 814 aa14.7□□□□□ -0.06
ATL3-203ENST00000538786 RPS27LQ71UM5 84 aaKnown RBP14.7□□□□□ -0.06
ATL3-203ENST00000538786 SERPINA9Q86WD7 417 aa14.7□□□□□ -0.06
ATL3-203ENST00000538786 RBFAQ8N0V3 343 aa14.7□□□□□ -0.06
ATL3-203ENST00000538786 CELF5Q8N6W0 485 aaKnown RBP14.7□□□□□ -0.06
ATL3-203ENST00000538786 KIAA1958Q8N8K9 716 aa14.7□□□□□ -0.06
ATL3-203ENST00000538786 GIMAP7Q8NHV1 300 aa14.7□□□□□ -0.06
ATL3-203ENST00000538786 PPP1R36Q96LQ0 422 aa14.7□□□□□ -0.06
ATL3-203ENST00000538786 MCCC1Q96RQ3 725 aaPredicted RBP14.7□□□□□ -0.06
ATL3-203ENST00000538786 ZDHHC6Q9H6R6 413 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms