RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 SRRM1Q8IYB3 904 aaKnown RBP17.15■□□□□ 0.34
CLN6-202ENST00000538696 OR13C4Q8NGS5 318 aa17.15■□□□□ 0.34
CLN6-202ENST00000538696 CDKL2Q92772 493 aa17.15■□□□□ 0.34
CLN6-202ENST00000538696 BIRC7Q96CA5 298 aa17.15■□□□□ 0.34
CLN6-202ENST00000538696 NUS1Q96E22 293 aa17.15■□□□□ 0.34
CLN6-202ENST00000538696 DTD2Q96FN9 168 aa17.15■□□□□ 0.34
CLN6-202ENST00000538696 SELENOSQ9BQE4 189 aa17.15■□□□□ 0.34
CLN6-202ENST00000538696 ORAI3Q9BRQ5 295 aa17.15■□□□□ 0.34
CLN6-202ENST00000538696 DUSP15Q9H1R2 295 aaPredicted RBP17.15■□□□□ 0.34
CLN6-202ENST00000538696 EBF2Q9HAK2 575 aa17.15■□□□□ 0.34
CLN6-202ENST00000538696 PKD2L2Q9NZM6 624 aa17.15■□□□□ 0.34
CLN6-202ENST00000538696 CD84Q9UIB8 345 aa17.15■□□□□ 0.34
CLN6-202ENST00000538696 ZNF180Q9UJW8 692 aa17.15■□□□□ 0.34
CLN6-202ENST00000538696 PSAT1Q9Y617 370 aa17.15■□□□□ 0.34
CLN6-202ENST00000538696 A0A1W2PPM1 405 aa17.14■□□□□ 0.33
CLN6-202ENST00000538696 C2orf81A6NN90 581 aa17.14■□□□□ 0.33
CLN6-202ENST00000538696 WNT9AO14904 365 aa17.14■□□□□ 0.33
CLN6-202ENST00000538696 BPIP17213 487 aa17.14■□□□□ 0.33
CLN6-202ENST00000538696 KRT15P19012 456 aa17.14■□□□□ 0.33
CLN6-202ENST00000538696 ARNTP27540 789 aa17.14■□□□□ 0.33
CLN6-202ENST00000538696 TCF15Q12870 199 aa17.14■□□□□ 0.33
CLN6-202ENST00000538696 AGERQ15109 404 aa17.14■□□□□ 0.33
CLN6-202ENST00000538696 PLK5Q496M5 336 aa17.14■□□□□ 0.33
CLN6-202ENST00000538696 HSP90AA5PQ58FG0 334 aa17.14■□□□□ 0.33
CLN6-202ENST00000538696 LPCAT2Q7L5N7 544 aa17.14■□□□□ 0.33
CLN6-202ENST00000538696 CYP2U1Q7Z449 544 aa17.14■□□□□ 0.33
CLN6-202ENST00000538696 RAVER1Q8IY67 606 aaKnown RBP17.14■□□□□ 0.33
CLN6-202ENST00000538696 TP53I13Q8NBR0 393 aaPredicted RBP17.14■□□□□ 0.33
CLN6-202ENST00000538696 OR4K2Q8NGD2 314 aa17.14■□□□□ 0.33
CLN6-202ENST00000538696 ASB12Q8WXK4 309 aa17.14■□□□□ 0.33
CLN6-202ENST00000538696 SNX19Q92543 992 aa17.14■□□□□ 0.33
CLN6-202ENST00000538696 DNAJC1Q96KC8 554 aaKnown RBP17.14■□□□□ 0.33
CLN6-202ENST00000538696 HSPA12BQ96MM6 686 aa17.14■□□□□ 0.33
CLN6-202ENST00000538696 AGAP2Q99490 1192 aa17.14■□□□□ 0.33
CLN6-202ENST00000538696 SLC17A9Q9BYT1 436 aa17.14■□□□□ 0.33
CLN6-202ENST00000538696 IARS2Q9NSE4 1012 aaKnown RBP17.14■□□□□ 0.33
CLN6-202ENST00000538696 ZFATQ9P243 1243 aa17.14■□□□□ 0.33
CLN6-202ENST00000538696 IQANK1A0A1B0GTG1 560 aa17.13■□□□□ 0.33
CLN6-202ENST00000538696 MEI4A8MW99 385 aa17.13■□□□□ 0.33
CLN6-202ENST00000538696 GOLGA8TH3BQL2 631 aa17.13■□□□□ 0.33
CLN6-202ENST00000538696 CCL22O00626 93 aa17.13■□□□□ 0.33
CLN6-202ENST00000538696 RAD51BO15315 384 aa17.13■□□□□ 0.33
CLN6-202ENST00000538696 STX7O15400 261 aaKnown RBP17.13■□□□□ 0.33
CLN6-202ENST00000538696 SLC31A1O15431 190 aa17.13■□□□□ 0.33
CLN6-202ENST00000538696 PAK4O96013 591 aaPredicted RBP17.13■□□□□ 0.33
CLN6-202ENST00000538696 PSMA3P25788 255 aa17.13■□□□□ 0.33
CLN6-202ENST00000538696 ARCN1P48444 511 aaKnown RBP17.13■□□□□ 0.33
CLN6-202ENST00000538696 TMPRSS15P98073 1019 aa17.13■□□□□ 0.33
CLN6-202ENST00000538696 PDE1BQ01064 536 aa17.13■□□□□ 0.33
CLN6-202ENST00000538696 SGCGQ13326 291 aa17.13■□□□□ 0.33
CLN6-202ENST00000538696 LAMB3Q13751 1172 aa17.13■□□□□ 0.33
CLN6-202ENST00000538696 BMPR2Q13873 1038 aa17.13■□□□□ 0.33
CLN6-202ENST00000538696 WSCD2Q2TBF2 565 aa17.13■□□□□ 0.33
CLN6-202ENST00000538696 SETMARQ53H47 684 aaPredicted RBP17.13■□□□□ 0.33
CLN6-202ENST00000538696 TEDDM1Q5T9Z0 273 aa17.13■□□□□ 0.33
CLN6-202ENST00000538696 PDPK2PQ6A1A2 396 aa17.13■□□□□ 0.33
CLN6-202ENST00000538696 CEP68Q76N32 757 aa17.13■□□□□ 0.33
CLN6-202ENST00000538696 ARMCX6Q7L4S7 300 aa17.13■□□□□ 0.33
CLN6-202ENST00000538696 NRSN1Q8IZ57 195 aa17.13■□□□□ 0.33
CLN6-202ENST00000538696 PELI3Q8N2H9 469 aa17.13■□□□□ 0.33
CLN6-202ENST00000538696 GPR26Q8NDV2 337 aa17.13■□□□□ 0.33
CLN6-202ENST00000538696 OR13J1Q8NGT2 312 aa17.13■□□□□ 0.33
CLN6-202ENST00000538696 STYXQ8WUJ0 223 aa17.13■□□□□ 0.33
CLN6-202ENST00000538696 KLF6Q99612 283 aaPredicted RBP17.13■□□□□ 0.33
CLN6-202ENST00000538696 PRRX2Q99811 253 aa17.13■□□□□ 0.33
CLN6-202ENST00000538696 MYOCQ99972 504 aa17.13■□□□□ 0.33
CLN6-202ENST00000538696 ABCG8Q9H221 673 aa17.13■□□□□ 0.33
CLN6-202ENST00000538696 FZD3Q9NPG1 666 aa17.13■□□□□ 0.33
CLN6-202ENST00000538696 NLE1Q9NVX2 485 aaPredicted RBP17.13■□□□□ 0.33
CLN6-202ENST00000538696 NFKBIL1Q9UBC1 381 aaPredicted RBP17.13■□□□□ 0.33
CLN6-202ENST00000538696 FKBPLQ9UIM3 349 aa17.13■□□□□ 0.33
CLN6-202ENST00000538696 RIMKLBQ9ULI2 386 aa17.13■□□□□ 0.33
CLN6-202ENST00000538696 PKP3Q9Y446 797 aa17.13■□□□□ 0.33
CLN6-202ENST00000538696 R4GN57 208 aa17.13■□□□□ 0.33
CLN6-202ENST00000538696 A0A1W2PPC4 97 aa17.12■□□□□ 0.33
CLN6-202ENST00000538696 RGSL1A5PLK6 1076 aa17.12■□□□□ 0.33
CLN6-202ENST00000538696 TRIM49D1C9J1S8 452 aa17.12■□□□□ 0.33
CLN6-202ENST00000538696 RRP9O43818 475 aaKnown RBP17.12■□□□□ 0.33
CLN6-202ENST00000538696 VAPBO95292 243 aa17.12■□□□□ 0.33
CLN6-202ENST00000538696 IGFALSP35858 605 aa17.12■□□□□ 0.33
CLN6-202ENST00000538696 SPAM1P38567 509 aa17.12■□□□□ 0.33
CLN6-202ENST00000538696 PTGER3P43115 390 aa17.12■□□□□ 0.33
CLN6-202ENST00000538696 SERPINB9P50453 376 aa17.12■□□□□ 0.33
CLN6-202ENST00000538696 ARSDP51689 593 aa17.12■□□□□ 0.33
CLN6-202ENST00000538696 DCDC1P59894 354 aa17.12■□□□□ 0.33
CLN6-202ENST00000538696 IRF4Q15306 451 aa17.12■□□□□ 0.33
CLN6-202ENST00000538696 ZNF765Q7L2R6 523 aa17.12■□□□□ 0.33
CLN6-202ENST00000538696 TAOK1Q7L7X3 1001 aa17.12■□□□□ 0.33
CLN6-202ENST00000538696 NLRP9Q7RTR0 991 aa17.12■□□□□ 0.33
CLN6-202ENST00000538696 C4orf33Q8N1A6 199 aa17.12■□□□□ 0.33
CLN6-202ENST00000538696 ARFGAP2Q8N6H7 521 aa17.12■□□□□ 0.33
CLN6-202ENST00000538696 FOXJ1Q92949 421 aa17.12■□□□□ 0.33
CLN6-202ENST00000538696 SCAMP4Q969E2 229 aa17.12■□□□□ 0.33
CLN6-202ENST00000538696 MBNL1Q9NR56 388 aaKnown RBP17.12■□□□□ 0.33
CLN6-202ENST00000538696 ACTL7BQ9Y614 415 aa17.12■□□□□ 0.33
CLN6-202ENST00000538696 SLCO1B1Q9Y6L6 691 aa17.12■□□□□ 0.33
CLN6-202ENST00000538696 HMX2A2RU54 273 aa17.11■□□□□ 0.33
CLN6-202ENST00000538696 GAPDHSO14556 408 aaPredicted RBP17.11■□□□□ 0.33
CLN6-202ENST00000538696 PCCBP05166 539 aa17.11■□□□□ 0.33
CLN6-202ENST00000538696 SNRPAP09012 282 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms