RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 MAGEL2Q9UJ55 1249 aa16.75■□□□□ 0.27
SCARB1-205ENST00000538291 EFR3BQ9Y2G0 817 aa16.75■□□□□ 0.27
SCARB1-205ENST00000538291 USP2O75604 605 aaPredicted RBP16.75■□□□□ 0.27
SCARB1-205ENST00000538291 STK16O75716 305 aa16.75■□□□□ 0.27
SCARB1-205ENST00000538291 CHRNGP07510 517 aa16.75■□□□□ 0.27
SCARB1-205ENST00000538291 TPSB2P20231 275 aa16.75■□□□□ 0.27
SCARB1-205ENST00000538291 CLCNKBP51801 687 aa16.75■□□□□ 0.27
SCARB1-205ENST00000538291 GNA12Q03113 381 aa16.75■□□□□ 0.27
SCARB1-205ENST00000538291 LAPTM5Q13571 262 aa16.75■□□□□ 0.27
SCARB1-205ENST00000538291 TPSAB1Q15661 275 aa16.75■□□□□ 0.27
SCARB1-205ENST00000538291 OTOP3Q7RTS5 596 aa16.75■□□□□ 0.27
SCARB1-205ENST00000538291 C15orf41Q9Y2V0 281 aa16.75■□□□□ 0.27
SCARB1-205ENST00000538291 MATN4O95460 622 aa16.74■□□□□ 0.27
SCARB1-205ENST00000538291 NUDT17P0C025 328 aa16.74■□□□□ 0.27
SCARB1-205ENST00000538291 UBAP2LQ14157 1087 aaKnown RBP16.74■□□□□ 0.27
SCARB1-205ENST00000538291 TTC29Q8NA56 475 aaPredicted RBP16.74■□□□□ 0.27
SCARB1-205ENST00000538291 TMEM27Q9HBJ8 222 aa16.74■□□□□ 0.27
SCARB1-205ENST00000538291 RIPK3Q9Y572 518 aa16.74■□□□□ 0.27
SCARB1-205ENST00000538291 BBIP1A8MTZ0 92 aa16.74■□□□□ 0.27
SCARB1-205ENST00000538291 UNC5CO95185 931 aa16.74■□□□□ 0.27
SCARB1-205ENST00000538291 COL6A2P12110 1019 aa16.74■□□□□ 0.27
SCARB1-205ENST00000538291 GAD2Q05329 585 aa16.74■□□□□ 0.27
SCARB1-205ENST00000538291 SLC47A1Q96FL8 570 aa16.74■□□□□ 0.27
SCARB1-205ENST00000538291 SEZ6LQ9BYH1 1024 aa16.74■□□□□ 0.27
SCARB1-205ENST00000538291 MAGEH1Q9H213 219 aa16.74■□□□□ 0.27
SCARB1-205ENST00000538291 LRTM1Q9HBL6 345 aa16.74■□□□□ 0.27
SCARB1-205ENST00000538291 NT5EP21589 574 aa16.74■□□□□ 0.27
SCARB1-205ENST00000538291 CCNCP24863 283 aa16.74■□□□□ 0.27
SCARB1-205ENST00000538291 ARSHQ5FYA8 562 aa16.74■□□□□ 0.27
SCARB1-205ENST00000538291 C2orf73Q8N5S3 287 aaPredicted RBP16.74■□□□□ 0.27
SCARB1-205ENST00000538291 ING5Q8WYH8 240 aa16.74■□□□□ 0.27
SCARB1-205ENST00000538291 IL12RB2Q99665 862 aa16.74■□□□□ 0.27
SCARB1-205ENST00000538291 POLMQ9NP87 494 aaPredicted RBP16.74■□□□□ 0.27
SCARB1-205ENST00000538291 PACSIN3Q9UKS6 424 aa16.74■□□□□ 0.27
SCARB1-205ENST00000538291 SAMD4AQ9UPU9 718 aaKnown RBP16.74■□□□□ 0.27
SCARB1-205ENST00000538291 AP1S1P61966 158 aa16.74■□□□□ 0.27
SCARB1-205ENST00000538291 TTMPQ5BVD1 217 aa16.74■□□□□ 0.27
SCARB1-205ENST00000538291 LINGO4Q6UY18 593 aa16.74■□□□□ 0.27
SCARB1-205ENST00000538291 MREGQ8N565 214 aa16.74■□□□□ 0.27
SCARB1-205ENST00000538291 TRPV3Q8NET8 790 aa16.74■□□□□ 0.27
SCARB1-205ENST00000538291 OR2T12Q8NG77 320 aa16.74■□□□□ 0.27
SCARB1-205ENST00000538291 LMLNQ96KR4 655 aa16.74■□□□□ 0.27
SCARB1-205ENST00000538291 KCTD15Q96SI1 283 aaPredicted RBP16.74■□□□□ 0.27
SCARB1-205ENST00000538291 TNKS2Q9H2K2 1166 aa16.74■□□□□ 0.27
SCARB1-205ENST00000538291 FAM124BQ9H5Z6 455 aaPredicted RBP16.74■□□□□ 0.27
SCARB1-205ENST00000538291 TMEM138Q9NPI0 162 aa16.74■□□□□ 0.27
SCARB1-205ENST00000538291 MFSD11O43934 449 aa16.74■□□□□ 0.27
SCARB1-205ENST00000538291 ZNF155Q12901 538 aaPredicted RBP16.74■□□□□ 0.27
SCARB1-205ENST00000538291 NAE1Q13564 534 aa16.74■□□□□ 0.27
SCARB1-205ENST00000538291 NAIF1Q69YI7 327 aaPredicted RBP16.74■□□□□ 0.27
SCARB1-205ENST00000538291 BEND5Q7L4P6 421 aa16.74■□□□□ 0.27
SCARB1-205ENST00000538291 TRIM63Q969Q1 353 aa16.74■□□□□ 0.27
SCARB1-205ENST00000538291 PWWP2AQ96N64 755 aa16.74■□□□□ 0.27
SCARB1-205ENST00000538291 HEPHQ9BQS7 1158 aa16.74■□□□□ 0.27
SCARB1-205ENST00000538291 LRMDAQ9H2I8 198 aa16.74■□□□□ 0.27
SCARB1-205ENST00000538291 SEC14L3Q9UDX4 400 aa16.74■□□□□ 0.27
SCARB1-205ENST00000538291 IRGMA1A4Y4 181 aa16.73■□□□□ 0.27
SCARB1-205ENST00000538291 OR5F1O95221 314 aa16.73■□□□□ 0.27
SCARB1-205ENST00000538291 SLC20A2Q08357 652 aa16.73■□□□□ 0.27
SCARB1-205ENST00000538291 RAPSNQ13702 412 aa16.73■□□□□ 0.27
SCARB1-205ENST00000538291 LARS2Q15031 903 aaKnown RBP16.73■□□□□ 0.27
SCARB1-205ENST00000538291 DLG2Q15700 870 aa16.73■□□□□ 0.27
SCARB1-205ENST00000538291 ECM1Q16610 540 aa16.73■□□□□ 0.27
SCARB1-205ENST00000538291 UNC5BQ8IZJ1 945 aa16.73■□□□□ 0.27
SCARB1-205ENST00000538291 SLC43A3Q8NBI5 491 aa16.73■□□□□ 0.27
SCARB1-205ENST00000538291 KREMEN1Q96MU8 473 aa16.73■□□□□ 0.27
SCARB1-205ENST00000538291 TCF12Q99081 682 aa16.73■□□□□ 0.27
SCARB1-205ENST00000538291 MIOSQ9NXC5 875 aa16.73■□□□□ 0.27
SCARB1-205ENST00000538291 ZFP37Q9Y6Q3 630 aaPredicted RBP16.73■□□□□ 0.27
SCARB1-205ENST00000538291 PIAS1O75925 651 aa16.73■□□□□ 0.27
SCARB1-205ENST00000538291 LYNP07948 512 aa16.73■□□□□ 0.27
SCARB1-205ENST00000538291 KIR3DL1P43629 444 aa16.73■□□□□ 0.27
SCARB1-205ENST00000538291 CHN2P52757 468 aa16.73■□□□□ 0.27
SCARB1-205ENST00000538291 MINDY4Q4G0A6 757 aa16.73■□□□□ 0.27
SCARB1-205ENST00000538291 ZNF662Q6ZS27 426 aa16.73■□□□□ 0.27
SCARB1-205ENST00000538291 PTCHD4Q6ZW05 846 aa16.73■□□□□ 0.27
SCARB1-205ENST00000538291 SLC26A9Q7LBE3 791 aa16.73■□□□□ 0.27
SCARB1-205ENST00000538291 LRRN4CLQ8ND94 238 aa16.73■□□□□ 0.27
SCARB1-205ENST00000538291 SLC22A17Q8WUG5 538 aa16.73■□□□□ 0.27
SCARB1-205ENST00000538291 FAM84AQ96KN4 292 aa16.73■□□□□ 0.27
SCARB1-205ENST00000538291 RHOBTB2Q9BYZ6 727 aa16.73■□□□□ 0.27
SCARB1-205ENST00000538291 DPEP2Q9H4A9 486 aa16.73■□□□□ 0.27
SCARB1-205ENST00000538291 RNPEPL1Q9HAU8 725 aa16.73■□□□□ 0.27
SCARB1-205ENST00000538291 CCNB1IP1Q9NPC3 277 aa16.73■□□□□ 0.27
SCARB1-205ENST00000538291 FAM92AA1XBS5 289 aa16.73■□□□□ 0.27
SCARB1-205ENST00000538291 LYPLA1O75608 230 aaPredicted RBP16.73■□□□□ 0.27
SCARB1-205ENST00000538291 LAMP2P13473 410 aa16.73■□□□□ 0.27
SCARB1-205ENST00000538291 SP2Q02086 613 aa16.73■□□□□ 0.27
SCARB1-205ENST00000538291 PLD4Q96BZ4 506 aa16.73■□□□□ 0.27
SCARB1-205ENST00000538291 WRAP53Q9BUR4 548 aaKnown RBP16.73■□□□□ 0.27
SCARB1-205ENST00000538291 PRPF19Q9UMS4 504 aaKnown RBP16.73■□□□□ 0.27
SCARB1-205ENST00000538291 CPQQ9Y646 472 aa16.73■□□□□ 0.27
SCARB1-205ENST00000538291 XKRYO14609 159 aa16.73■□□□□ 0.27
SCARB1-205ENST00000538291 C2P06681 752 aa16.73■□□□□ 0.27
SCARB1-205ENST00000538291 ALPPL2P10696 532 aa16.73■□□□□ 0.27
SCARB1-205ENST00000538291 GRSF1Q12849 480 aaKnown RBP eCLIP16.73■□□□□ 0.27
SCARB1-205ENST00000538291 IPCEF1Q8WWN9 437 aaPredicted RBP16.73■□□□□ 0.27
SCARB1-205ENST00000538291 ARNTL2Q8WYA1 636 aa16.73■□□□□ 0.27
SCARB1-205ENST00000538291 DNASE1L2Q92874 299 aa16.73■□□□□ 0.27
SCARB1-205ENST00000538291 GTF2IRD1Q9UHL9 959 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms