RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 PHYKPLQ8IUZ5 450 aa9.21□□□□□ -0.94
DDB1-211ENST00000538280 MFN1Q8IWA4 741 aa9.21□□□□□ -0.94
DDB1-211ENST00000538280 CLYBLQ8N0X4 340 aa9.21□□□□□ -0.94
DDB1-211ENST00000538280 GJD3Q8N144 294 aa9.21□□□□□ -0.94
DDB1-211ENST00000538280 CFAP52Q8N1V2 620 aa9.21□□□□□ -0.94
DDB1-211ENST00000538280 PQLC1Q8N2U9 271 aa9.21□□□□□ -0.94
DDB1-211ENST00000538280 TTC30BQ8N4P2 665 aa9.21□□□□□ -0.94
DDB1-211ENST00000538280 MDGA1Q8NFP4 955 aa9.21□□□□□ -0.94
DDB1-211ENST00000538280 KIAA1191Q96A73 305 aa9.21□□□□□ -0.94
DDB1-211ENST00000538280 CDRT15Q96T59 188 aa9.21□□□□□ -0.94
DDB1-211ENST00000538280 NPAS2Q99743 824 aa9.21□□□□□ -0.94
DDB1-211ENST00000538280 ZBED2Q9BTP6 218 aa9.21□□□□□ -0.94
DDB1-211ENST00000538280 CINPQ9BW66 212 aaPredicted RBP9.21□□□□□ -0.94
DDB1-211ENST00000538280 VCXQ9H320 206 aa9.21□□□□□ -0.94
DDB1-211ENST00000538280 EBF3Q9H4W6 596 aa9.21□□□□□ -0.94
DDB1-211ENST00000538280 SYTL2Q9HCH5 934 aa9.21□□□□□ -0.94
DDB1-211ENST00000538280 MRPL40Q9NQ50 206 aaKnown RBP9.21□□□□□ -0.94
DDB1-211ENST00000538280 CRYL1Q9Y2S2 319 aa9.21□□□□□ -0.94
DDB1-211ENST00000538280 ASB3Q9Y575 518 aa9.21□□□□□ -0.94
DDB1-211ENST00000538280 ACTL7AQ9Y615 435 aa9.21□□□□□ -0.94
DDB1-211ENST00000538280 OAS3Q9Y6K5 1087 aaKnown RBP9.21□□□□□ -0.94
DDB1-211ENST00000538280 ANAPC1Q9H1A4 1944 aa9.21□□□□□ -0.94
DDB1-211ENST00000538280 PIEZO1Q92508 2521 aa9.2□□□□□ -0.94
DDB1-211ENST00000538280 PRR33A8MZF0 331 aa9.2□□□□□ -0.94
DDB1-211ENST00000538280 NT5C1B-RDH14C9J2C7 533 aa9.2□□□□□ -0.94
DDB1-211ENST00000538280 H3BMM5 538 aa9.2□□□□□ -0.94
DDB1-211ENST00000538280 STX16-NPEPL1H3BU86 382 aa9.2□□□□□ -0.94
DDB1-211ENST00000538280 STX16O14662 325 aa9.2□□□□□ -0.94
DDB1-211ENST00000538280 UBDO15205 165 aa9.2□□□□□ -0.94
DDB1-211ENST00000538280 FZD6O60353 706 aa9.2□□□□□ -0.94
DDB1-211ENST00000538280 SUPT7LO94864 414 aa9.2□□□□□ -0.94
DDB1-211ENST00000538280 SEC24AO95486 1093 aa9.2□□□□□ -0.94
DDB1-211ENST00000538280 C8BP07358 591 aa9.2□□□□□ -0.94
DDB1-211ENST00000538280 LYNP07948 512 aa9.2□□□□□ -0.94
DDB1-211ENST00000538280 SNRPB2P08579 225 aaKnown RBP9.2□□□□□ -0.94
DDB1-211ENST00000538280 ALDOCP09972 364 aaKnown RBP9.2□□□□□ -0.94
DDB1-211ENST00000538280 PRR35P0CG20 571 aa9.2□□□□□ -0.94
DDB1-211ENST00000538280 ARSAP15289 507 aa9.2□□□□□ -0.94
DDB1-211ENST00000538280 GPX3P22352 226 aa9.2□□□□□ -0.94
DDB1-211ENST00000538280 CORO1AP31146 461 aaKnown RBP9.2□□□□□ -0.94
DDB1-211ENST00000538280 CLCN2P51788 898 aa9.2□□□□□ -0.94
DDB1-211ENST00000538280 PSME3P61289 254 aa9.2□□□□□ -0.94
DDB1-211ENST00000538280 RPS24P62847 133 aaKnown RBP9.2□□□□□ -0.94
DDB1-211ENST00000538280 ARF5P84085 180 aa9.2□□□□□ -0.94
DDB1-211ENST00000538280 MS4A2Q01362 244 aa9.2□□□□□ -0.94
DDB1-211ENST00000538280 TRAP1Q12931 704 aaKnown RBP9.2□□□□□ -0.94
DDB1-211ENST00000538280 ART3Q13508 389 aa9.2□□□□□ -0.94
DDB1-211ENST00000538280 FLOT2Q14254 428 aa9.2□□□□□ -0.94
DDB1-211ENST00000538280 FASTKQ14296 549 aaKnown RBP9.2□□□□□ -0.94
DDB1-211ENST00000538280 GRM2Q14416 872 aa9.2□□□□□ -0.94
DDB1-211ENST00000538280 USP41Q3LFD5 358 aa9.2□□□□□ -0.94
DDB1-211ENST00000538280 TPGS2Q68CL5 300 aa9.2□□□□□ -0.94
DDB1-211ENST00000538280 IL31Q6EBC2 164 aa9.2□□□□□ -0.94
DDB1-211ENST00000538280 NCEH1Q6PIU2 408 aa9.2□□□□□ -0.94
DDB1-211ENST00000538280 RPS27LQ71UM5 84 aaKnown RBP9.2□□□□□ -0.94
DDB1-211ENST00000538280 PTGR2Q8N8N7 351 aaPredicted RBP9.2□□□□□ -0.94
DDB1-211ENST00000538280 WBP2Q969T9 261 aa9.2□□□□□ -0.94
DDB1-211ENST00000538280 PHF21BQ96EK2 531 aa9.2□□□□□ -0.94
DDB1-211ENST00000538280 C19orf60Q96EN9 201 aa9.2□□□□□ -0.94
DDB1-211ENST00000538280 PHOX2BQ99453 314 aa9.2□□□□□ -0.94
DDB1-211ENST00000538280 RAD9AQ99638 391 aa9.2□□□□□ -0.94
DDB1-211ENST00000538280 CLSTN3Q9BQT9 956 aa9.2□□□□□ -0.94
DDB1-211ENST00000538280 SLC25A23Q9BV35 468 aa9.2□□□□□ -0.94
DDB1-211ENST00000538280 HERC2P3Q9BVR0 1158 aa9.2□□□□□ -0.94
DDB1-211ENST00000538280 SPATS2LQ9NUQ6 558 aaKnown RBP9.2□□□□□ -0.94
DDB1-211ENST00000538280 CACNA2D2Q9NY47 1150 aa9.2□□□□□ -0.94
DDB1-211ENST00000538280 PDP2Q9P2J9 529 aa9.2□□□□□ -0.94
DDB1-211ENST00000538280 DNMT3BQ9UBC3 853 aaKnown RBP9.2□□□□□ -0.94
DDB1-211ENST00000538280 LHX3Q9UBR4 397 aa9.2□□□□□ -0.94
DDB1-211ENST00000538280 CD300AQ9UGN4 299 aa9.2□□□□□ -0.94
DDB1-211ENST00000538280 SCOCQ9UIL1 159 aa9.2□□□□□ -0.94
DDB1-211ENST00000538280 PACSIN3Q9UKS6 424 aa9.2□□□□□ -0.94
DDB1-211ENST00000538280 IKZF3Q9UKT9 509 aa9.2□□□□□ -0.94
DDB1-211ENST00000538280 AGO1Q9UL18 857 aaKnown RBP9.2□□□□□ -0.94
DDB1-211ENST00000538280 TMCO1Q9UM00 188 aa9.2□□□□□ -0.94
DDB1-211ENST00000538280 SCN8AQ9UQD0 1980 aa9.2□□□□□ -0.94
DDB1-211ENST00000538280 TECTAO75443 2155 aa9.19□□□□□ -0.94
DDB1-211ENST00000538280 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.19□□□□□ -0.94
DDB1-211ENST00000538280 GRXCR2A6NFK2 248 aa9.19□□□□□ -0.94
DDB1-211ENST00000538280 BBIP1A8MTZ0 92 aa9.19□□□□□ -0.94
DDB1-211ENST00000538280 UBXN8O00124 270 aa9.19□□□□□ -0.94
DDB1-211ENST00000538280 PSMD12O00232 456 aaPredicted RBP9.19□□□□□ -0.94
DDB1-211ENST00000538280 AZIN1O14977 448 aa9.19□□□□□ -0.94
DDB1-211ENST00000538280 AP1G1O43747 822 aa9.19□□□□□ -0.94
DDB1-211ENST00000538280 RNASEH1O60930 286 aaKnown RBP9.19□□□□□ -0.94
DDB1-211ENST00000538280 CSPG5O95196 566 aa9.19□□□□□ -0.94
DDB1-211ENST00000538280 PARNO95453 639 aaKnown RBP9.19□□□□□ -0.94
DDB1-211ENST00000538280 MATN4O95460 622 aa9.19□□□□□ -0.94
DDB1-211ENST00000538280 SLC4A1P02730 911 aa9.19□□□□□ -0.94
DDB1-211ENST00000538280 PIRTP0C851 137 aa9.19□□□□□ -0.94
DDB1-211ENST00000538280 PRSS56P0CW18 603 aa9.19□□□□□ -0.94
DDB1-211ENST00000538280 LPOP22079 712 aaPredicted RBP9.19□□□□□ -0.94
DDB1-211ENST00000538280 OR1D2P34982 312 aa9.19□□□□□ -0.94
DDB1-211ENST00000538280 ALDH1A3P47895 512 aa9.19□□□□□ -0.94
DDB1-211ENST00000538280 PPP3CCP48454 512 aa9.19□□□□□ -0.94
DDB1-211ENST00000538280 CLCN4P51793 760 aa9.19□□□□□ -0.94
DDB1-211ENST00000538280 AQP4P55087 323 aa9.19□□□□□ -0.94
DDB1-211ENST00000538280 ADARP55265 1226 aaKnown RBP9.19□□□□□ -0.94
DDB1-211ENST00000538280 PKNOX1P55347 436 aa9.19□□□□□ -0.94
DDB1-211ENST00000538280 SH3BP2P78314 561 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms