RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 SLC4A7Q9Y6M7 1214 aa8.66□□□□□ -1.02
UBE3B-208ENST00000538070 C1orf232A0A0U1RR37 186 aa8.66□□□□□ -1.02
UBE3B-208ENST00000538070 PRORSD1PA6NEY8 169 aa8.66□□□□□ -1.02
UBE3B-208ENST00000538070 SMAD6O43541 496 aaKnown RBP8.66□□□□□ -1.02
UBE3B-208ENST00000538070 OR6B1O95007 311 aa8.66□□□□□ -1.02
UBE3B-208ENST00000538070 MTHFD1P11586 935 aaKnown RBP8.66□□□□□ -1.02
UBE3B-208ENST00000538070 CSKP41240 450 aa8.66□□□□□ -1.02
UBE3B-208ENST00000538070 TUFMP49411 452 aaKnown RBP8.66□□□□□ -1.02
UBE3B-208ENST00000538070 HERVK_113P63132 956 aa8.66□□□□□ -1.02
UBE3B-208ENST00000538070 PLOD1Q02809 727 aaPredicted RBP8.66□□□□□ -1.02
UBE3B-208ENST00000538070 TRAF7Q6Q0C0 670 aa8.66□□□□□ -1.02
UBE3B-208ENST00000538070 RALGPS2Q86X27 583 aaPredicted RBP8.66□□□□□ -1.02
UBE3B-208ENST00000538070 PDSS2Q86YH6 399 aa8.66□□□□□ -1.02
UBE3B-208ENST00000538070 GPSM1Q86YR5 675 aa8.66□□□□□ -1.02
UBE3B-208ENST00000538070 MFN1Q8IWA4 741 aa8.66□□□□□ -1.02
UBE3B-208ENST00000538070 LILRA2Q8N149 483 aa8.66□□□□□ -1.02
UBE3B-208ENST00000538070 STAG3L4Q8TBR4 150 aa8.66□□□□□ -1.02
UBE3B-208ENST00000538070 WFDC5Q8TCV5 224 aa8.66□□□□□ -1.02
UBE3B-208ENST00000538070 FEM1CQ96JP0 617 aa8.66□□□□□ -1.02
UBE3B-208ENST00000538070 MCMBPQ9BTE3 642 aa8.66□□□□□ -1.02
UBE3B-208ENST00000538070 AARSD1Q9BTE6 412 aaKnown RBP8.66□□□□□ -1.02
UBE3B-208ENST00000538070 CCDC28BQ9BUN5 200 aa8.66□□□□□ -1.02
UBE3B-208ENST00000538070 BOCQ9BWV1 1114 aa8.66□□□□□ -1.02
UBE3B-208ENST00000538070 ERVK-6Q9BXR3 956 aa8.66□□□□□ -1.02
UBE3B-208ENST00000538070 CACNA2D2Q9NY47 1150 aa8.66□□□□□ -1.02
UBE3B-208ENST00000538070 PSMD13Q9UNM6 376 aa8.66□□□□□ -1.02
UBE3B-208ENST00000538070 ASB1Q9Y576 335 aa8.66□□□□□ -1.02
UBE3B-208ENST00000538070 CPQQ9Y646 472 aa8.66□□□□□ -1.02
UBE3B-208ENST00000538070 LOC285095A0A1B0GVY8 99 aa8.66□□□□□ -1.02
UBE3B-208ENST00000538070 KRT87PA6NCN2 255 aa8.66□□□□□ -1.02
UBE3B-208ENST00000538070 MROH6A6NGR9 719 aa8.66□□□□□ -1.02
UBE3B-208ENST00000538070 FBP2O00757 339 aa8.66□□□□□ -1.02
UBE3B-208ENST00000538070 INPP4BO15327 924 aa8.66□□□□□ -1.02
UBE3B-208ENST00000538070 PYGLP06737 847 aa8.66□□□□□ -1.02
UBE3B-208ENST00000538070 ALDOCP09972 364 aaKnown RBP8.66□□□□□ -1.02
UBE3B-208ENST00000538070 UQCRBP14927 111 aa8.66□□□□□ -1.02
UBE3B-208ENST00000538070 HTR7P34969 479 aa8.66□□□□□ -1.02
UBE3B-208ENST00000538070 MAGEA11P43364 429 aa8.66□□□□□ -1.02
UBE3B-208ENST00000538070 YBX1P67809 324 aaKnown RBP8.66□□□□□ -1.02
UBE3B-208ENST00000538070 NRG1Q02297 640 aaPredicted RBP8.66□□□□□ -1.02
UBE3B-208ENST00000538070 NFYCQ13952 458 aa8.66□□□□□ -1.02
UBE3B-208ENST00000538070 BTG3Q14201 252 aaPredicted RBP8.66□□□□□ -1.02
UBE3B-208ENST00000538070 SQLEQ14534 574 aa8.66□□□□□ -1.02
UBE3B-208ENST00000538070 LHX8Q68G74 356 aa8.66□□□□□ -1.02
UBE3B-208ENST00000538070 AAGABQ6PD74 315 aa8.66□□□□□ -1.02
UBE3B-208ENST00000538070 MILR1Q7Z6M3 343 aa8.66□□□□□ -1.02
UBE3B-208ENST00000538070 DNAJB7Q7Z6W7 309 aaPredicted RBP8.66□□□□□ -1.02
UBE3B-208ENST00000538070 KBTBD6Q86V97 674 aa8.66□□□□□ -1.02
UBE3B-208ENST00000538070 CLHC1Q8NHS4 586 aa8.66□□□□□ -1.02
UBE3B-208ENST00000538070 ASIC4Q96FT7 647 aa8.66□□□□□ -1.02
UBE3B-208ENST00000538070 TMEM74Q96NL1 305 aa8.66□□□□□ -1.02
UBE3B-208ENST00000538070 ASB8Q9H765 288 aa8.66□□□□□ -1.02
UBE3B-208ENST00000538070 CAAP1Q9H8G2 361 aa8.66□□□□□ -1.02
UBE3B-208ENST00000538070 AP4S1Q9Y587 144 aa8.66□□□□□ -1.02
UBE3B-208ENST00000538070 AP4B1Q9Y6B7 739 aa8.66□□□□□ -1.02
UBE3B-208ENST00000538070 NUP214P35658 2090 aaPredicted RBP8.65□□□□□ -1.02
UBE3B-208ENST00000538070 RNF103-CHMP3A0A140T963 221 aa8.65□□□□□ -1.02
UBE3B-208ENST00000538070 A0A1W2PQ67 120 aa8.65□□□□□ -1.02
UBE3B-208ENST00000538070 ANKRD66B4E2M5 251 aa8.65□□□□□ -1.02
UBE3B-208ENST00000538070 H3BNX3 289 aa8.65□□□□□ -1.02
UBE3B-208ENST00000538070 PDLIM1O00151 329 aa8.65□□□□□ -1.02
UBE3B-208ENST00000538070 SYNCRIPO60506 623 aaKnown RBP8.65□□□□□ -1.02
UBE3B-208ENST00000538070 CLDN11O75508 207 aa8.65□□□□□ -1.02
UBE3B-208ENST00000538070 CHEK2O96017 543 aa8.65□□□□□ -1.02
UBE3B-208ENST00000538070 PKMP14618 531 aaKnown RBP8.65□□□□□ -1.02
UBE3B-208ENST00000538070 RPL10P27635 214 aaKnown RBP8.65□□□□□ -1.02
UBE3B-208ENST00000538070 GABRR2P28476 465 aa8.65□□□□□ -1.02
UBE3B-208ENST00000538070 MAPKAPK2P49137 400 aa8.65□□□□□ -1.02
UBE3B-208ENST00000538070 CDH4P55283 916 aa8.65□□□□□ -1.02
UBE3B-208ENST00000538070 IL2P60568 153 aa8.65□□□□□ -1.02
UBE3B-208ENST00000538070 TLE2Q04725 743 aa8.65□□□□□ -1.02
UBE3B-208ENST00000538070 CBLBQ13191 982 aa8.65□□□□□ -1.02
UBE3B-208ENST00000538070 AAK1Q2M2I8 961 aa8.65□□□□□ -1.02
UBE3B-208ENST00000538070 PIGGQ5H8A4 983 aa8.65□□□□□ -1.02
UBE3B-208ENST00000538070 RABL3Q5HYI8 236 aa8.65□□□□□ -1.02
UBE3B-208ENST00000538070 FBXL19Q6PCT2 694 aa8.65□□□□□ -1.02
UBE3B-208ENST00000538070 IL27RAQ6UWB1 636 aa8.65□□□□□ -1.02
UBE3B-208ENST00000538070 BEND5Q7L4P6 421 aa8.65□□□□□ -1.02
UBE3B-208ENST00000538070 APCDD1Q8J025 514 aa8.65□□□□□ -1.02
UBE3B-208ENST00000538070 OR52B6Q8NGF0 335 aa8.65□□□□□ -1.02
UBE3B-208ENST00000538070 METTL6Q8TCB7 284 aa8.65□□□□□ -1.02
UBE3B-208ENST00000538070 UBXN10Q96LJ8 280 aa8.65□□□□□ -1.02
UBE3B-208ENST00000538070 ADGRE3Q9BY15 652 aa8.65□□□□□ -1.02
UBE3B-208ENST00000538070 GRIP2Q9C0E4 1043 aa8.65□□□□□ -1.02
UBE3B-208ENST00000538070 MAGEH1Q9H213 219 aa8.65□□□□□ -1.02
UBE3B-208ENST00000538070 ARNT2Q9HBZ2 717 aa8.65□□□□□ -1.02
UBE3B-208ENST00000538070 ZFP14Q9HCL3 533 aa8.65□□□□□ -1.02
UBE3B-208ENST00000538070 BCAP29Q9UHQ4 241 aa8.65□□□□□ -1.02
UBE3B-208ENST00000538070 CD84Q9UIB8 345 aa8.65□□□□□ -1.02
UBE3B-208ENST00000538070 A6NHS1 94 aa8.65□□□□□ -1.02
UBE3B-208ENST00000538070 TRIM38O00635 465 aa8.65□□□□□ -1.02
UBE3B-208ENST00000538070 STK19P49842 368 aaPredicted RBP8.65□□□□□ -1.02
UBE3B-208ENST00000538070 FAM189BP81408 668 aa8.65□□□□□ -1.02
UBE3B-208ENST00000538070 ELAVL2Q12926 359 aaKnown RBP8.65□□□□□ -1.02
UBE3B-208ENST00000538070 TLR1Q15399 786 aa8.65□□□□□ -1.02
UBE3B-208ENST00000538070 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.65□□□□□ -1.02
UBE3B-208ENST00000538070 ADGRF1Q5T601 910 aa8.65□□□□□ -1.02
UBE3B-208ENST00000538070 MBOAT1Q6ZNC8 495 aa8.65□□□□□ -1.02
UBE3B-208ENST00000538070 SATL1Q86VE3 508 aa8.65□□□□□ -1.02
UBE3B-208ENST00000538070 HERC6Q8IVU3 1022 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms