RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 POLD2P49005 469 aa9.06□□□□□ -0.96
USP28-205ENST00000537706 Q0VFX4 171 aa9.06□□□□□ -0.96
USP28-205ENST00000537706 FOXD4Q12950 439 aaPredicted RBP9.06□□□□□ -0.96
USP28-205ENST00000537706 TMCO4Q5TGY1 634 aa9.06□□□□□ -0.96
USP28-205ENST00000537706 AFMIDQ63HM1 303 aa9.06□□□□□ -0.96
USP28-205ENST00000537706 CAVIN1Q6NZI2 390 aaKnown RBP9.06□□□□□ -0.96
USP28-205ENST00000537706 MEX3BQ6ZN04 569 aaKnown RBP9.06□□□□□ -0.96
USP28-205ENST00000537706 DPPA4Q7L190 304 aa9.06□□□□□ -0.96
USP28-205ENST00000537706 PPM1KQ8N3J5 372 aa9.06□□□□□ -0.96
USP28-205ENST00000537706 ZBTB2Q8N680 514 aa9.06□□□□□ -0.96
USP28-205ENST00000537706 OR8K5Q8NH50 307 aa9.06□□□□□ -0.96
USP28-205ENST00000537706 UBXN4Q92575 508 aa9.06□□□□□ -0.96
USP28-205ENST00000537706 CNDP1Q96KN2 507 aa9.06□□□□□ -0.96
USP28-205ENST00000537706 CHST8Q9H2A9 424 aa9.06□□□□□ -0.96
USP28-205ENST00000537706 ZNF552Q9H707 407 aaPredicted RBP9.06□□□□□ -0.96
USP28-205ENST00000537706 ATP13A3Q9H7F0 1226 aa9.06□□□□□ -0.96
USP28-205ENST00000537706 GRPEL1Q9HAV7 217 aa9.06□□□□□ -0.96
USP28-205ENST00000537706 PIGVQ9NUD9 493 aa9.06□□□□□ -0.96
USP28-205ENST00000537706 DIDO1Q9BTC0 2240 aaKnown RBP9.06□□□□□ -0.96
USP28-205ENST00000537706 A0A0U1RQS6 177 aa9.05□□□□□ -0.96
USP28-205ENST00000537706 FAM171A2A8MVW0 826 aa9.05□□□□□ -0.96
USP28-205ENST00000537706 C9J4A7 227 aa9.05□□□□□ -0.96
USP28-205ENST00000537706 CETN3O15182 167 aa9.05□□□□□ -0.96
USP28-205ENST00000537706 SCRG1O75711 98 aa9.05□□□□□ -0.96
USP28-205ENST00000537706 FUCA1P04066 466 aa9.05□□□□□ -0.96
USP28-205ENST00000537706 OTX2P32243 289 aa9.05□□□□□ -0.96
USP28-205ENST00000537706 KCNK10P57789 538 aa9.05□□□□□ -0.96
USP28-205ENST00000537706 CETN1Q12798 172 aa9.05□□□□□ -0.96
USP28-205ENST00000537706 RALGDSQ12967 914 aa9.05□□□□□ -0.96
USP28-205ENST00000537706 PDCLQ13371 301 aa9.05□□□□□ -0.96
USP28-205ENST00000537706 DCAF10Q5QP82 559 aa9.05□□□□□ -0.96
USP28-205ENST00000537706 FAAH2Q6GMR7 532 aa9.05□□□□□ -0.96
USP28-205ENST00000537706 RWDD4Q6NW29 188 aaKnown RBP9.05□□□□□ -0.96
USP28-205ENST00000537706 TMEM200AQ86VY9 491 aa9.05□□□□□ -0.96
USP28-205ENST00000537706 ANKRD20A12PQ8NF67 263 aa9.05□□□□□ -0.96
USP28-205ENST00000537706 GBP5Q96PP8 586 aa9.05□□□□□ -0.96
USP28-205ENST00000537706 MLPHQ9BV36 600 aaPredicted RBP9.05□□□□□ -0.96
USP28-205ENST00000537706 EPS8L2Q9H6S3 715 aa9.05□□□□□ -0.96
USP28-205ENST00000537706 SYNCQ9H7C4 482 aa9.05□□□□□ -0.96
USP28-205ENST00000537706 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.05□□□□□ -0.96
USP28-205ENST00000537706 CPNE7Q9UBL6 633 aa9.05□□□□□ -0.96
USP28-205ENST00000537706 KIAA1324LA8MWY0 1029 aaPredicted RBP9.05□□□□□ -0.96
USP28-205ENST00000537706 FOXO6A8MYZ6 492 aa9.05□□□□□ -0.96
USP28-205ENST00000537706 PCDH17O14917 1159 aa9.05□□□□□ -0.96
USP28-205ENST00000537706 INSIG1O15503 277 aa9.05□□□□□ -0.96
USP28-205ENST00000537706 POLR2DO15514 142 aaKnown RBP9.05□□□□□ -0.96
USP28-205ENST00000537706 SNX2O60749 519 aa9.05□□□□□ -0.96
USP28-205ENST00000537706 TIAF1O95411 115 aa9.05□□□□□ -0.96
USP28-205ENST00000537706 VIPP01282 170 aa9.05□□□□□ -0.96
USP28-205ENST00000537706 PYGLP06737 847 aa9.05□□□□□ -0.96
USP28-205ENST00000537706 RHOQP17081 205 aa9.05□□□□□ -0.96
USP28-205ENST00000537706 TYRP1P17643 537 aa9.05□□□□□ -0.96
USP28-205ENST00000537706 CA7P43166 264 aa9.05□□□□□ -0.96
USP28-205ENST00000537706 GPR1P46091 355 aa9.05□□□□□ -0.96
USP28-205ENST00000537706 IST1P53990 364 aa9.05□□□□□ -0.96
USP28-205ENST00000537706 TLR1Q15399 786 aa9.05□□□□□ -0.96
USP28-205ENST00000537706 PYCR3Q53H96 274 aa9.05□□□□□ -0.96
USP28-205ENST00000537706 IRGCQ6NXR0 463 aa9.05□□□□□ -0.96
USP28-205ENST00000537706 MARK2Q7KZI7 788 aaKnown RBP9.05□□□□□ -0.96
USP28-205ENST00000537706 CPLX3Q8WVH0 158 aa9.05□□□□□ -0.96
USP28-205ENST00000537706 CPT1BQ92523 772 aa9.05□□□□□ -0.96
USP28-205ENST00000537706 SCARF2Q96GP6 870 aaPredicted RBP9.05□□□□□ -0.96
USP28-205ENST00000537706 ZNF514Q96K75 400 aaPredicted RBP9.05□□□□□ -0.96
USP28-205ENST00000537706 MAGEB10Q96LZ2 347 aaPredicted RBP9.05□□□□□ -0.96
USP28-205ENST00000537706 LRFN5Q96NI6 719 aa9.05□□□□□ -0.96
USP28-205ENST00000537706 AKIRIN1Q9H9L7 192 aaPredicted RBP9.05□□□□□ -0.96
USP28-205ENST00000537706 ATP13A2Q9NQ11 1180 aa9.05□□□□□ -0.96
USP28-205ENST00000537706 ZNF212Q9UDV6 495 aa9.05□□□□□ -0.96
USP28-205ENST00000537706 DNAI1Q9UI46 699 aa9.05□□□□□ -0.96
USP28-205ENST00000537706 ST14Q9Y5Y6 855 aa9.05□□□□□ -0.96
USP28-205ENST00000537706 POLEQ07864 2286 aa9.04□□□□□ -0.96
USP28-205ENST00000537706 RNF225M0QZC1 329 aaPredicted RBP9.04□□□□□ -0.96
USP28-205ENST00000537706 ASMTLO95671 621 aa9.04□□□□□ -0.96
USP28-205ENST00000537706 KRT5P13647 590 aa9.04□□□□□ -0.96
USP28-205ENST00000537706 F3P13726 295 aa9.04□□□□□ -0.96
USP28-205ENST00000537706 DNAJA1P31689 397 aaKnown RBP9.04□□□□□ -0.96
USP28-205ENST00000537706 MARSP56192 900 aaKnown RBP9.04□□□□□ -0.96
USP28-205ENST00000537706 MCCD1P59942 119 aaPredicted RBP9.04□□□□□ -0.96
USP28-205ENST00000537706 DSG2Q14126 1118 aa9.04□□□□□ -0.96
USP28-205ENST00000537706 CBWD6Q4V339 395 aa9.04□□□□□ -0.96
USP28-205ENST00000537706 CBWD3Q5JTY5 395 aa9.04□□□□□ -0.96
USP28-205ENST00000537706 CBWD5Q5RIA9 395 aa9.04□□□□□ -0.96
USP28-205ENST00000537706 TMTC4Q5T4D3 741 aa9.04□□□□□ -0.96
USP28-205ENST00000537706 GAS2L3Q86XJ1 694 aa9.04□□□□□ -0.96
USP28-205ENST00000537706 PGAP3Q96FM1 320 aaPredicted RBP9.04□□□□□ -0.96
USP28-205ENST00000537706 COQ10AQ96MF6 247 aa9.04□□□□□ -0.96
USP28-205ENST00000537706 NPY6RQ99463 290 aa9.04□□□□□ -0.96
USP28-205ENST00000537706 DHRS4Q9BTZ2 278 aa9.04□□□□□ -0.96
USP28-205ENST00000537706 FANCEQ9HB96 536 aa9.04□□□□□ -0.96
USP28-205ENST00000537706 METTL14Q9HCE5 456 aaKnown RBP9.04□□□□□ -0.96
USP28-205ENST00000537706 GPAMQ9HCL2 828 aa9.04□□□□□ -0.96
USP28-205ENST00000537706 KCND1Q9NSA2 647 aa9.04□□□□□ -0.96
USP28-205ENST00000537706 SH3BGRL2Q9UJC5 107 aa9.04□□□□□ -0.96
USP28-205ENST00000537706 RPH3AQ9Y2J0 694 aaPredicted RBP9.04□□□□□ -0.96
USP28-205ENST00000537706 C19orf84I3L1E1 186 aa9.03□□□□□ -0.96
USP28-205ENST00000537706 CUTAO60888 179 aa9.03□□□□□ -0.96
USP28-205ENST00000537706 LETM1O95202 739 aaPredicted RBP9.03□□□□□ -0.96
USP28-205ENST00000537706 CD63P08962 238 aa9.03□□□□□ -0.96
USP28-205ENST00000537706 CYP2A6P11509 494 aaPredicted RBP9.03□□□□□ -0.96
USP28-205ENST00000537706 ADSLP30566 484 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms