RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 WNT7AO00755 349 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 ABLIM1O14639 778 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 DDX3YO15523 660 aaKnown RBP10.6□□□□□ -0.71
CLIP1-209ENST00000537178 HCN1O60741 890 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 DRD4P21917 467 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 S100A1P23297 94 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 KIR3DL1P43629 444 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 GNPDA1P46926 289 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 WNT3AP56704 352 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 SMAD3P84022 425 aaKnown RBP10.6□□□□□ -0.71
CLIP1-209ENST00000537178 CTBP1Q13363 440 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 RAPSNQ13702 412 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 ZMYND11Q15326 602 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 MPPE1Q53F39 396 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 IPCEF1Q8WWN9 437 aaPredicted RBP10.6□□□□□ -0.71
CLIP1-209ENST00000537178 FAM210AQ96ND0 272 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 FERD3LQ96RJ6 166 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 P2RX7Q99572 595 aaKnown RBP10.6□□□□□ -0.71
CLIP1-209ENST00000537178 AIF1LQ9BQI0 150 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 TPK1Q9H3S4 243 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 POLR3HQ9Y535 204 aaPredicted RBP10.6□□□□□ -0.71
CLIP1-209ENST00000537178 ROBO1Q9Y6N7 1651 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 hCG_1818297A0A087WSY0 165 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 FAM172BPA6NC97 362 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 EML1O00423 815 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 RGS10O43665 173 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 ZNF432O94892 652 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 TRBC1P01850 177 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 ASGR1P07306 291 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 CYP4B1P13584 511 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 PCSK2P16519 638 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 FAM91A1Q658Y4 838 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.6□□□□□ -0.71
CLIP1-209ENST00000537178 GJD3Q8N144 294 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 ZNF433Q8N7K0 673 aaPredicted RBP10.6□□□□□ -0.71
CLIP1-209ENST00000537178 TNFAIP8L1Q8WVP5 186 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 TBC1D24Q9ULP9 559 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.6□□□□□ -0.71
CLIP1-209ENST00000537178 HBS1LQ9Y450 684 aaKnown RBP10.6□□□□□ -0.71
CLIP1-209ENST00000537178 NCANO14594 1321 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 DUOX1Q9NRD9 1551 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 TMEM150BA6NC51 233 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 AGPSO00116 658 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 CDC40O60508 579 aaKnown RBP eCLIP10.6□□□□□ -0.71
CLIP1-209ENST00000537178 MSCO60682 206 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 EDF1O60869 148 aaKnown RBP10.6□□□□□ -0.71
CLIP1-209ENST00000537178 NOS1APO75052 506 aaPredicted RBP10.6□□□□□ -0.71
CLIP1-209ENST00000537178 TGDSO95455 350 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 ZBTB11O95625 1053 aaPredicted RBP10.6□□□□□ -0.71
CLIP1-209ENST00000537178 AIF1P55008 147 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 CDH13P55290 713 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 FUT2Q10981 343 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 IL18Q14116 193 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 GRM3Q14832 879 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 BRMS1LQ5PSV4 323 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 ZDHHC20Q5W0Z9 365 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 C1orf186Q6ZWK4 172 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 JAZF1Q86VZ6 243 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 MCEMP1Q8IX19 187 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 TNS4Q8IZW8 715 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 SLC4A11Q8NBS3 891 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 FAM81AQ8TBF8 368 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 SHC3Q92529 594 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 CST11Q9H112 138 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 PCDHB9Q9Y5E1 797 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 PRMT5O14744 637 aaPredicted RBP10.6□□□□□ -0.71
CLIP1-209ENST00000537178 SEMA3DO95025 777 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 ADH1AP07327 375 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 SAGP10523 405 aaPredicted RBP10.6□□□□□ -0.71
CLIP1-209ENST00000537178 ELP6Q0PNE2 266 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 LARS2Q15031 903 aaKnown RBP10.6□□□□□ -0.71
CLIP1-209ENST00000537178 SNAPC1Q16533 368 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 ATXN7L2Q5T6C5 722 aaPredicted RBP10.6□□□□□ -0.71
CLIP1-209ENST00000537178 DUPD1Q68J44 220 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 ZNF730Q6ZMV8 503 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 CPSF7Q8N684 471 aaKnown RBP10.6□□□□□ -0.71
CLIP1-209ENST00000537178 OR8D1Q8WZ84 308 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 TNFRSF25Q93038 417 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 AARSD1Q9BTE6 412 aaKnown RBP10.6□□□□□ -0.71
CLIP1-209ENST00000537178 SYNPO2Q9UMS6 1093 aa10.6□□□□□ -0.71
CLIP1-209ENST00000537178 OR14I1A6ND48 311 aa10.59□□□□□ -0.71
CLIP1-209ENST00000537178 SLC30A4O14863 429 aa10.59□□□□□ -0.71
CLIP1-209ENST00000537178 FSCN2O14926 492 aa10.59□□□□□ -0.71
CLIP1-209ENST00000537178 PIRTP0C851 137 aa10.59□□□□□ -0.71
CLIP1-209ENST00000537178 COL6A2P12110 1019 aa10.59□□□□□ -0.71
CLIP1-209ENST00000537178 PRKAR2AP13861 404 aaKnown RBP10.59□□□□□ -0.71
CLIP1-209ENST00000537178 MC4RP32245 332 aa10.59□□□□□ -0.71
CLIP1-209ENST00000537178 MATKP42679 507 aa10.59□□□□□ -0.71
CLIP1-209ENST00000537178 MTTPP55157 894 aa10.59□□□□□ -0.71
CLIP1-209ENST00000537178 STXBP1P61764 594 aaKnown RBP10.59□□□□□ -0.71
CLIP1-209ENST00000537178 GTF2BQ00403 316 aa10.59□□□□□ -0.71
CLIP1-209ENST00000537178 PCDH1Q08174 1060 aa10.59□□□□□ -0.71
CLIP1-209ENST00000537178 CBX2Q14781 532 aaPredicted RBP10.59□□□□□ -0.71
CLIP1-209ENST00000537178 ATP13A5Q4VNC0 1218 aa10.59□□□□□ -0.71
CLIP1-209ENST00000537178 THAP5Q7Z6K1 395 aa10.59□□□□□ -0.71
CLIP1-209ENST00000537178 CUZD1Q86UP6 607 aa10.59□□□□□ -0.71
CLIP1-209ENST00000537178 ZBTB46Q86UZ6 589 aa10.59□□□□□ -0.71
CLIP1-209ENST00000537178 C10orf107Q8IVU9 208 aa10.59□□□□□ -0.71
CLIP1-209ENST00000537178 OR5T3Q8NGG3 340 aa10.59□□□□□ -0.71
CLIP1-209ENST00000537178 OR10G6Q8NH81 332 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms