RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 KLHDC8BQ8IXV7 354 aa17.07■□□□□ 0.32
SFSWAP-205ENST00000537164 TRAM1L1Q8N609 369 aa17.07■□□□□ 0.32
SFSWAP-205ENST00000537164 TTC13Q8NBP0 860 aa17.07■□□□□ 0.32
SFSWAP-205ENST00000537164 CCDC112Q8NEF3 446 aa17.07■□□□□ 0.32
SFSWAP-205ENST00000537164 CCDC74AQ96AQ1 378 aa17.07■□□□□ 0.32
SFSWAP-205ENST00000537164 PLEKHG4BQ96PX9 1271 aa17.07■□□□□ 0.32
SFSWAP-205ENST00000537164 GPR63Q9BZJ6 419 aa17.07■□□□□ 0.32
SFSWAP-205ENST00000537164 DPEP2Q9H4A9 486 aa17.07■□□□□ 0.32
SFSWAP-205ENST00000537164 RMI1Q9H9A7 625 aa17.07■□□□□ 0.32
SFSWAP-205ENST00000537164 HACD3Q9P035 362 aa17.07■□□□□ 0.32
SFSWAP-205ENST00000537164 TAAR2Q9P1P5 351 aa17.07■□□□□ 0.32
SFSWAP-205ENST00000537164 RABGEF1Q9UJ41 708 aa17.07■□□□□ 0.32
SFSWAP-205ENST00000537164 PACSIN2Q9UNF0 486 aaPredicted RBP17.07■□□□□ 0.32
SFSWAP-205ENST00000537164 TMEM98Q9Y2Y6 226 aa17.07■□□□□ 0.32
SFSWAP-205ENST00000537164 PCDHB1Q9Y5F3 818 aa17.07■□□□□ 0.32
SFSWAP-205ENST00000537164 SPO11Q9Y5K1 396 aa17.07■□□□□ 0.32
SFSWAP-205ENST00000537164 OAS3Q9Y6K5 1087 aaKnown RBP17.07■□□□□ 0.32
SFSWAP-205ENST00000537164 ZNF106Q9H2Y7 1883 aaKnown RBP17.06■□□□□ 0.32
SFSWAP-205ENST00000537164 INPP4BO15327 924 aa17.06■□□□□ 0.32
SFSWAP-205ENST00000537164 KRT86O43790 486 aa17.06■□□□□ 0.32
SFSWAP-205ENST00000537164 CSO75390 466 aaKnown RBP17.06■□□□□ 0.32
SFSWAP-205ENST00000537164 KRT37O76014 449 aa17.06■□□□□ 0.32
SFSWAP-205ENST00000537164 ANXA9O76027 345 aa17.06■□□□□ 0.32
SFSWAP-205ENST00000537164 FTCDO95954 541 aa17.06■□□□□ 0.32
SFSWAP-205ENST00000537164 ANKRD20A2Q5SQ80 823 aa17.06■□□□□ 0.32
SFSWAP-205ENST00000537164 ANKRD20A1Q5TYW2 823 aa17.06■□□□□ 0.32
SFSWAP-205ENST00000537164 ANKRD20A3Q5VUR7 823 aa17.06■□□□□ 0.32
SFSWAP-205ENST00000537164 ITPRIPL1Q6GPH6 555 aa17.06■□□□□ 0.32
SFSWAP-205ENST00000537164 DOK6Q6PKX4 331 aa17.06■□□□□ 0.32
SFSWAP-205ENST00000537164 RBM44Q6ZP01 1051 aaKnown RBP17.06■□□□□ 0.32
SFSWAP-205ENST00000537164 SFTPA2Q8IWL1 248 aa17.06■□□□□ 0.32
SFSWAP-205ENST00000537164 TTC30BQ8N4P2 665 aa17.06■□□□□ 0.32
SFSWAP-205ENST00000537164 OR2M4Q96R27 311 aa17.06■□□□□ 0.32
SFSWAP-205ENST00000537164 C10orf88Q9H8K7 445 aa17.06■□□□□ 0.32
SFSWAP-205ENST00000537164 RSPH14Q9UHP6 348 aa17.06■□□□□ 0.32
SFSWAP-205ENST00000537164 GOLGA6L9A6NEM1 432 aa17.05■□□□□ 0.32
SFSWAP-205ENST00000537164 GPR89AB7ZAQ6 455 aa17.05■□□□□ 0.32
SFSWAP-205ENST00000537164 AURKAO14965 403 aa17.05■□□□□ 0.32
SFSWAP-205ENST00000537164 DXOO77932 396 aaKnown RBP17.05■□□□□ 0.32
SFSWAP-205ENST00000537164 ATP1A1P05023 1023 aaKnown RBP17.05■□□□□ 0.32
SFSWAP-205ENST00000537164 GPR89BP0CG08 455 aa17.05■□□□□ 0.32
SFSWAP-205ENST00000537164 BPIP17213 487 aa17.05■□□□□ 0.32
SFSWAP-205ENST00000537164 AK4P27144 223 aaPredicted RBP17.05■□□□□ 0.32
SFSWAP-205ENST00000537164 ADRA1AP35348 466 aa17.05■□□□□ 0.32
SFSWAP-205ENST00000537164 PDX1P52945 283 aa17.05■□□□□ 0.32
SFSWAP-205ENST00000537164 GEMP55040 296 aa17.05■□□□□ 0.32
SFSWAP-205ENST00000537164 NR1D2Q14995 579 aa17.05■□□□□ 0.32
SFSWAP-205ENST00000537164 IGF2-ASQ6U949 168 aa17.05■□□□□ 0.32
SFSWAP-205ENST00000537164 RANBP10Q6VN20 620 aa17.05■□□□□ 0.32
SFSWAP-205ENST00000537164 ZNF438Q7Z4V0 828 aa17.05■□□□□ 0.32
SFSWAP-205ENST00000537164 GALNT13Q8IUC8 556 aa17.05■□□□□ 0.32
SFSWAP-205ENST00000537164 NAGSQ8N159 534 aa17.05■□□□□ 0.32
SFSWAP-205ENST00000537164 ZDHHC1Q8WTX9 485 aa17.05■□□□□ 0.32
SFSWAP-205ENST00000537164 SPATA13Q96N96 652 aa17.05■□□□□ 0.32
SFSWAP-205ENST00000537164 SPATA16Q9BXB7 569 aa17.05■□□□□ 0.32
SFSWAP-205ENST00000537164 CARD9Q9H257 536 aa17.05■□□□□ 0.32
SFSWAP-205ENST00000537164 ENTPD2Q9Y5L3 495 aa17.05■□□□□ 0.32
SFSWAP-205ENST00000537164 ZFYVE26Q68DK2 2539 aa17.04■□□□□ 0.32
SFSWAP-205ENST00000537164 A0A1W2PQM1 296 aa17.04■□□□□ 0.32
SFSWAP-205ENST00000537164 C5orf60A6NFR6 353 aa17.04■□□□□ 0.32
SFSWAP-205ENST00000537164 B4DGG1 531 aa17.04■□□□□ 0.32
SFSWAP-205ENST00000537164 CASC3O15234 703 aaKnown RBP17.04■□□□□ 0.32
SFSWAP-205ENST00000537164 KCNN4O15554 427 aa17.04■□□□□ 0.32
SFSWAP-205ENST00000537164 NUAK1O60285 661 aa17.04■□□□□ 0.32
SFSWAP-205ENST00000537164 USP12O75317 370 aa17.04■□□□□ 0.32
SFSWAP-205ENST00000537164 STK10O94804 968 aaKnown RBP17.04■□□□□ 0.32
SFSWAP-205ENST00000537164 CHRNA4P43681 627 aa17.04■□□□□ 0.32
SFSWAP-205ENST00000537164 TNNT3P45378 269 aaPredicted RBP17.04■□□□□ 0.32
SFSWAP-205ENST00000537164 LSSP48449 732 aa17.04■□□□□ 0.32
SFSWAP-205ENST00000537164 SPIDRQ14159 915 aa17.04■□□□□ 0.32
SFSWAP-205ENST00000537164 KIF26BQ2KJY2 2108 aa17.04■□□□□ 0.32
SFSWAP-205ENST00000537164 ZNF569Q5MCW4 686 aa17.04■□□□□ 0.32
SFSWAP-205ENST00000537164 ZDHHC20Q5W0Z9 365 aa17.04■□□□□ 0.32
SFSWAP-205ENST00000537164 DARS2Q6PI48 645 aaKnown RBP17.04■□□□□ 0.32
SFSWAP-205ENST00000537164 SLC30A9Q6PML9 568 aa17.04■□□□□ 0.32
SFSWAP-205ENST00000537164 LRRC8AQ8IWT6 810 aa17.04■□□□□ 0.32
SFSWAP-205ENST00000537164 IPMKQ8NFU5 416 aa17.04■□□□□ 0.32
SFSWAP-205ENST00000537164 GLYATL1Q969I3 302 aa17.04■□□□□ 0.32
SFSWAP-205ENST00000537164 PPP1R2P1Q96PQ5 205 aa17.04■□□□□ 0.32
SFSWAP-205ENST00000537164 VPS35Q96QK1 796 aa17.04■□□□□ 0.32
SFSWAP-205ENST00000537164 TRIM39Q9HCM9 518 aa17.04■□□□□ 0.32
SFSWAP-205ENST00000537164 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.04■□□□□ 0.32
SFSWAP-205ENST00000537164 IL17CQ9P0M4 197 aa17.04■□□□□ 0.32
SFSWAP-205ENST00000537164 LRIT1Q9P2V4 623 aa17.04■□□□□ 0.32
SFSWAP-205ENST00000537164 AAR2Q9Y312 384 aaKnown RBP17.04■□□□□ 0.32
SFSWAP-205ENST00000537164 PLEKHM1Q9Y4G2 1056 aa17.04■□□□□ 0.32
SFSWAP-205ENST00000537164 GPSM3Q9Y4H4 160 aa17.04■□□□□ 0.32
SFSWAP-205ENST00000537164 PCYT1BQ9Y5K3 369 aaPredicted RBP17.04■□□□□ 0.32
SFSWAP-205ENST00000537164 RNF215Q9Y6U7 377 aa17.04■□□□□ 0.32
SFSWAP-205ENST00000537164 FAM208BQ5VWN6 2430 aa17.04■□□□□ 0.32
SFSWAP-205ENST00000537164 A0A087WV48 116 aa17.03■□□□□ 0.32
SFSWAP-205ENST00000537164 D6RAR5 112 aa17.03■□□□□ 0.32
SFSWAP-205ENST00000537164 CHUKO15111 745 aa17.03■□□□□ 0.32
SFSWAP-205ENST00000537164 PPFIA2O75334 1257 aa17.03■□□□□ 0.32
SFSWAP-205ENST00000537164 SLC25A14O95258 325 aaPredicted RBP17.03■□□□□ 0.32
SFSWAP-205ENST00000537164 ASMTLO95671 621 aa17.03■□□□□ 0.32
SFSWAP-205ENST00000537164 ACTR1BP42025 376 aa17.03■□□□□ 0.32
SFSWAP-205ENST00000537164 ACTR1AP61163 376 aa17.03■□□□□ 0.32
SFSWAP-205ENST00000537164 CCL7P80098 99 aa17.03■□□□□ 0.32
SFSWAP-205ENST00000537164 MARK2Q7KZI7 788 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms