RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 SCARF2Q96GP6 870 aaPredicted RBP17.76■□□□□ 0.43
TNFRSF1A-209ENST00000536717 TRNAU1APQ9NX07 287 aaKnown RBP17.76■□□□□ 0.43
TNFRSF1A-209ENST00000536717 TTC7AQ9ULT0 858 aaPredicted RBP17.76■□□□□ 0.43
TNFRSF1A-209ENST00000536717 TMEM98Q9Y2Y6 226 aa17.76■□□□□ 0.43
TNFRSF1A-209ENST00000536717 AK5Q9Y6K8 562 aa17.76■□□□□ 0.43
TNFRSF1A-209ENST00000536717 PTPRQQ9UMZ3 2332 aa17.76■□□□□ 0.43
TNFRSF1A-209ENST00000536717 H7C0C1 242 aa17.75■□□□□ 0.43
TNFRSF1A-209ENST00000536717 PGRMC1O00264 195 aaKnown RBP17.75■□□□□ 0.43
TNFRSF1A-209ENST00000536717 NTN3O00634 580 aaPredicted RBP17.75■□□□□ 0.43
TNFRSF1A-209ENST00000536717 PIRTP0C851 137 aa17.75■□□□□ 0.43
TNFRSF1A-209ENST00000536717 NFKB1P19838 968 aa17.75■□□□□ 0.43
TNFRSF1A-209ENST00000536717 AK4P27144 223 aaPredicted RBP17.75■□□□□ 0.43
TNFRSF1A-209ENST00000536717 ATP5OP48047 213 aa17.75■□□□□ 0.43
TNFRSF1A-209ENST00000536717 EIF3EP60228 445 aaKnown RBP17.75■□□□□ 0.43
TNFRSF1A-209ENST00000536717 ZNF567Q8N184 647 aa17.75■□□□□ 0.43
TNFRSF1A-209ENST00000536717 CCHCR1Q8TD31 782 aa17.75■□□□□ 0.43
TNFRSF1A-209ENST00000536717 HIC2Q96JB3 615 aa17.75■□□□□ 0.43
TNFRSF1A-209ENST00000536717 QKIQ96PU8 341 aaKnown RBP eCLIP17.75■□□□□ 0.43
TNFRSF1A-209ENST00000536717 FERMT1Q9BQL6 677 aa17.75■□□□□ 0.43
TNFRSF1A-209ENST00000536717 FRMD8P1Q9BZ68 369 aaPredicted RBP17.75■□□□□ 0.43
TNFRSF1A-209ENST00000536717 DPEP2Q9H4A9 486 aa17.75■□□□□ 0.43
TNFRSF1A-209ENST00000536717 ZFYVE1Q9HBF4 777 aa17.75■□□□□ 0.43
TNFRSF1A-209ENST00000536717 MAGEE1Q9HCI5 957 aa17.75■□□□□ 0.43
TNFRSF1A-209ENST00000536717 SPATS2LQ9NUQ6 558 aaKnown RBP17.75■□□□□ 0.43
TNFRSF1A-209ENST00000536717 UBP1Q9NZI7 540 aa17.75■□□□□ 0.43
TNFRSF1A-209ENST00000536717 PKD2L2Q9NZM6 624 aa17.75■□□□□ 0.43
TNFRSF1A-209ENST00000536717 CNOT6Q9ULM6 557 aaKnown RBP17.75■□□□□ 0.43
TNFRSF1A-209ENST00000536717 SHOC2Q9UQ13 582 aa17.75■□□□□ 0.43
TNFRSF1A-209ENST00000536717 ITPR1Q14643 2758 aa17.74■□□□□ 0.43
TNFRSF1A-209ENST00000536717 FADS2P1A8MWK0 482 aa17.74■□□□□ 0.43
TNFRSF1A-209ENST00000536717 B4DGG1 531 aa17.74■□□□□ 0.43
TNFRSF1A-209ENST00000536717 FANCGO15287 622 aa17.74■□□□□ 0.43
TNFRSF1A-209ENST00000536717 INPP4BO15327 924 aa17.74■□□□□ 0.43
TNFRSF1A-209ENST00000536717 MTSS1O43312 755 aa17.74■□□□□ 0.43
TNFRSF1A-209ENST00000536717 TLX3O43711 291 aaPredicted RBP17.74■□□□□ 0.43
TNFRSF1A-209ENST00000536717 BRINP1O60477 761 aa17.74■□□□□ 0.43
TNFRSF1A-209ENST00000536717 PMPCBO75439 489 aa17.74■□□□□ 0.43
TNFRSF1A-209ENST00000536717 TCEA3O75764 348 aa17.74■□□□□ 0.43
TNFRSF1A-209ENST00000536717 RBP3P10745 1247 aa17.74■□□□□ 0.43
TNFRSF1A-209ENST00000536717 PDX1P52945 283 aa17.74■□□□□ 0.43
TNFRSF1A-209ENST00000536717 HLTFQ14527 1009 aaKnown RBP eCLIP17.74■□□□□ 0.43
TNFRSF1A-209ENST00000536717 KDELC1Q6UW63 502 aa17.74■□□□□ 0.43
TNFRSF1A-209ENST00000536717 ACTRT1Q8TDG2 376 aa17.74■□□□□ 0.43
TNFRSF1A-209ENST00000536717 HTR3CQ8WXA8 447 aa17.74■□□□□ 0.43
TNFRSF1A-209ENST00000536717 MS4A14Q96JA4 679 aa17.74■□□□□ 0.43
TNFRSF1A-209ENST00000536717 VAT1Q99536 393 aa17.74■□□□□ 0.43
TNFRSF1A-209ENST00000536717 GSDMCQ9BYG8 508 aa17.74■□□□□ 0.43
TNFRSF1A-209ENST00000536717 FAM83DQ9H4H8 585 aa17.74■□□□□ 0.43
TNFRSF1A-209ENST00000536717 GPSM3Q9Y4H4 160 aa17.74■□□□□ 0.43
TNFRSF1A-209ENST00000536717 ENTPD2Q9Y5L3 495 aa17.74■□□□□ 0.43
TNFRSF1A-209ENST00000536717 A0A1W2PQM1 296 aa17.73■□□□□ 0.43
TNFRSF1A-209ENST00000536717 RGSL1A5PLK6 1076 aa17.73■□□□□ 0.43
TNFRSF1A-209ENST00000536717 ZNF185O15231 689 aa17.73■□□□□ 0.43
TNFRSF1A-209ENST00000536717 USP12O75317 370 aa17.73■□□□□ 0.43
TNFRSF1A-209ENST00000536717 NDST3O95803 873 aa17.73■□□□□ 0.43
TNFRSF1A-209ENST00000536717 ADCY8P40145 1251 aa17.73■□□□□ 0.43
TNFRSF1A-209ENST00000536717 CTBSQ01459 385 aa17.73■□□□□ 0.43
TNFRSF1A-209ENST00000536717 ILF3Q12906 894 aaKnown RBP eCLIP17.73■□□□□ 0.43
TNFRSF1A-209ENST00000536717 C14orf28Q4W4Y0 310 aa17.73■□□□□ 0.43
TNFRSF1A-209ENST00000536717 CERCAMQ5T4B2 595 aa17.73■□□□□ 0.43
TNFRSF1A-209ENST00000536717 RBM44Q6ZP01 1051 aaKnown RBP17.73■□□□□ 0.43
TNFRSF1A-209ENST00000536717 TMC3Q7Z5M5 1100 aa17.73■□□□□ 0.43
TNFRSF1A-209ENST00000536717 CDKL3Q8IVW4 592 aaPredicted RBP17.73■□□□□ 0.43
TNFRSF1A-209ENST00000536717 OR6C4Q8NGE1 309 aa17.73■□□□□ 0.43
TNFRSF1A-209ENST00000536717 WDR48Q8TAF3 677 aa17.73■□□□□ 0.43
TNFRSF1A-209ENST00000536717 FAM118BQ9BPY3 351 aa17.73■□□□□ 0.43
TNFRSF1A-209ENST00000536717 C10orf88Q9H8K7 445 aa17.73■□□□□ 0.43
TNFRSF1A-209ENST00000536717 HOMER3Q9NSC5 361 aa17.73■□□□□ 0.43
TNFRSF1A-209ENST00000536717 TAAR2Q9P1P5 351 aa17.73■□□□□ 0.43
TNFRSF1A-209ENST00000536717 KLHL8Q9P2G9 620 aaPredicted RBP17.73■□□□□ 0.43
TNFRSF1A-209ENST00000536717 FAM153AQ9UHL3 310 aa17.73■□□□□ 0.43
TNFRSF1A-209ENST00000536717 R3HDM2Q9Y2K5 976 aaKnown RBP17.73■□□□□ 0.43
TNFRSF1A-209ENST00000536717 ZNF711Q9Y462 761 aa17.73■□□□□ 0.43
TNFRSF1A-209ENST00000536717 PLEKHM1Q9Y4G2 1056 aa17.73■□□□□ 0.43
TNFRSF1A-209ENST00000536717 PCYT1BQ9Y5K3 369 aaPredicted RBP17.73■□□□□ 0.43
TNFRSF1A-209ENST00000536717 OAS3Q9Y6K5 1087 aaKnown RBP17.73■□□□□ 0.43
TNFRSF1A-209ENST00000536717 LOC400499M0QZD8 3231 aa17.73■□□□□ 0.43
TNFRSF1A-209ENST00000536717 ZNF106Q9H2Y7 1883 aaKnown RBP17.73■□□□□ 0.43
TNFRSF1A-209ENST00000536717 BPTFQ12830 3046 aa17.73■□□□□ 0.43
TNFRSF1A-209ENST00000536717 A0A1W2PNU3 283 aaPredicted RBP17.72■□□□□ 0.43
TNFRSF1A-209ENST00000536717 ZNF189O75820 626 aaPredicted RBP17.72■□□□□ 0.43
TNFRSF1A-209ENST00000536717 MPOP05164 745 aa17.72■□□□□ 0.43
TNFRSF1A-209ENST00000536717 FGF1P05230 155 aa17.72■□□□□ 0.43
TNFRSF1A-209ENST00000536717 GLB1P16278 677 aa17.72■□□□□ 0.43
TNFRSF1A-209ENST00000536717 SPIDRQ14159 915 aa17.72■□□□□ 0.43
TNFRSF1A-209ENST00000536717 PYCR3Q53H96 274 aa17.72■□□□□ 0.43
TNFRSF1A-209ENST00000536717 DARS2Q6PI48 645 aaKnown RBP17.72■□□□□ 0.43
TNFRSF1A-209ENST00000536717 SLC30A9Q6PML9 568 aa17.72■□□□□ 0.43
TNFRSF1A-209ENST00000536717 PID1Q7Z2X4 250 aa17.72■□□□□ 0.43
TNFRSF1A-209ENST00000536717 C17orf82Q86X59 251 aaPredicted RBP17.72■□□□□ 0.43
TNFRSF1A-209ENST00000536717 GPR26Q8NDV2 337 aa17.72■□□□□ 0.43
TNFRSF1A-209ENST00000536717 ZNF592Q92610 1267 aa17.72■□□□□ 0.43
TNFRSF1A-209ENST00000536717 OXNAD1Q96HP4 312 aaPredicted RBP17.72■□□□□ 0.43
TNFRSF1A-209ENST00000536717 MRGPRX2Q96LB1 330 aa17.72■□□□□ 0.43
TNFRSF1A-209ENST00000536717 OR2M4Q96R27 311 aa17.72■□□□□ 0.43
TNFRSF1A-209ENST00000536717 FCRL5Q96RD9 977 aa17.72■□□□□ 0.43
TNFRSF1A-209ENST00000536717 SPO11Q9Y5K1 396 aa17.72■□□□□ 0.43
TNFRSF1A-209ENST00000536717 LOC285095A0A1B0GVY8 99 aa17.72■□□□□ 0.43
TNFRSF1A-209ENST00000536717 F5H423 210 aaPredicted RBP17.72■□□□□ 0.43
TNFRSF1A-209ENST00000536717 AURKAO14965 403 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms