RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 E2F1Q01094 437 aa13.06□□□□□ -0.32
PRKDC-206ENST00000536429 CTBSQ01459 385 aa13.06□□□□□ -0.32
PRKDC-206ENST00000536429 RPS6KA1Q15418 735 aa13.06□□□□□ -0.32
PRKDC-206ENST00000536429 PYCR3Q53H96 274 aa13.06□□□□□ -0.32
PRKDC-206ENST00000536429 SEL1L2Q5TEA6 688 aa13.06□□□□□ -0.32
PRKDC-206ENST00000536429 SLC30A9Q6PML9 568 aa13.06□□□□□ -0.32
PRKDC-206ENST00000536429 MICALCLQ6ZW33 695 aa13.06□□□□□ -0.32
PRKDC-206ENST00000536429 SLC13A5Q86YT5 568 aaPredicted RBP13.06□□□□□ -0.32
PRKDC-206ENST00000536429 TAB3Q8N5C8 712 aaPredicted RBP13.06□□□□□ -0.32
PRKDC-206ENST00000536429 DCBLD1Q8N8Z6 715 aa13.06□□□□□ -0.32
PRKDC-206ENST00000536429 KDF1Q8NAX2 398 aaPredicted RBP13.06□□□□□ -0.32
PRKDC-206ENST00000536429 TTC13Q8NBP0 860 aa13.06□□□□□ -0.32
PRKDC-206ENST00000536429 PATE1Q8WXA2 126 aa13.06□□□□□ -0.32
PRKDC-206ENST00000536429 SCG3Q8WXD2 468 aaKnown RBP13.06□□□□□ -0.32
PRKDC-206ENST00000536429 GLMNQ92990 594 aa13.06□□□□□ -0.32
PRKDC-206ENST00000536429 CCDC74AQ96AQ1 378 aa13.06□□□□□ -0.32
PRKDC-206ENST00000536429 OR2M4Q96R27 311 aa13.06□□□□□ -0.32
PRKDC-206ENST00000536429 FSD1LQ9BXM9 530 aa13.06□□□□□ -0.32
PRKDC-206ENST00000536429 TLR10Q9BXR5 811 aa13.06□□□□□ -0.32
PRKDC-206ENST00000536429 KCNF1Q9H3M0 494 aa13.06□□□□□ -0.32
PRKDC-206ENST00000536429 TRNAU1APQ9NX07 287 aaKnown RBP13.06□□□□□ -0.32
PRKDC-206ENST00000536429 TAAR2Q9P1P5 351 aa13.06□□□□□ -0.32
PRKDC-206ENST00000536429 CLCA2Q9UQC9 943 aa13.06□□□□□ -0.32
PRKDC-206ENST00000536429 PCDHB1Q9Y5F3 818 aa13.06□□□□□ -0.32
PRKDC-206ENST00000536429 CFAP47Q6ZTR5 3102 aa13.05□□□□□ -0.32
PRKDC-206ENST00000536429 MTX2O75431 263 aa13.05□□□□□ -0.32
PRKDC-206ENST00000536429 ANXA9O76027 345 aa13.05□□□□□ -0.32
PRKDC-206ENST00000536429 STK10O94804 968 aaKnown RBP13.05□□□□□ -0.32
PRKDC-206ENST00000536429 FGF1P05230 155 aa13.05□□□□□ -0.32
PRKDC-206ENST00000536429 PYGLP06737 847 aa13.05□□□□□ -0.32
PRKDC-206ENST00000536429 RPIAP49247 311 aa13.05□□□□□ -0.32
PRKDC-206ENST00000536429 MAZP56270 477 aaKnown RBP13.05□□□□□ -0.32
PRKDC-206ENST00000536429 SIX1Q15475 284 aaPredicted RBP13.05□□□□□ -0.32
PRKDC-206ENST00000536429 KCTD19Q17RG1 926 aaPredicted RBP13.05□□□□□ -0.32
PRKDC-206ENST00000536429 KHDC1Q4VXA5 237 aaKnown RBP13.05□□□□□ -0.32
PRKDC-206ENST00000536429 ZNF569Q5MCW4 686 aa13.05□□□□□ -0.32
PRKDC-206ENST00000536429 DENND5AQ6IQ26 1287 aa13.05□□□□□ -0.32
PRKDC-206ENST00000536429 OGFOD3Q6PK18 319 aa13.05□□□□□ -0.32
PRKDC-206ENST00000536429 RANBP10Q6VN20 620 aa13.05□□□□□ -0.32
PRKDC-206ENST00000536429 GLT6D1Q7Z4J2 308 aa13.05□□□□□ -0.32
PRKDC-206ENST00000536429 PRUNE1Q86TP1 453 aa13.05□□□□□ -0.32
PRKDC-206ENST00000536429 KLHDC8BQ8IXV7 354 aa13.05□□□□□ -0.32
PRKDC-206ENST00000536429 SDR16C5Q8N3Y7 309 aa13.05□□□□□ -0.32
PRKDC-206ENST00000536429 TRAM1L1Q8N609 369 aa13.05□□□□□ -0.32
PRKDC-206ENST00000536429 C1orf54Q8WWF1 131 aa13.05□□□□□ -0.32
PRKDC-206ENST00000536429 ZCCHC14Q8WYQ9 949 aaKnown RBP13.05□□□□□ -0.32
PRKDC-206ENST00000536429 CCDC3Q9BQI4 270 aa13.05□□□□□ -0.32
PRKDC-206ENST00000536429 FERMT1Q9BQL6 677 aa13.05□□□□□ -0.32
PRKDC-206ENST00000536429 DPEP2Q9H4A9 486 aa13.05□□□□□ -0.32
PRKDC-206ENST00000536429 IL26Q9NPH9 171 aa13.05□□□□□ -0.32
PRKDC-206ENST00000536429 NCKIPSDQ9NZQ3 722 aa13.05□□□□□ -0.32
PRKDC-206ENST00000536429 IL17CQ9P0M4 197 aa13.05□□□□□ -0.32
PRKDC-206ENST00000536429 ATXN10Q9UBB4 475 aa13.05□□□□□ -0.32
PRKDC-206ENST00000536429 NFKBIL1Q9UBC1 381 aaPredicted RBP13.05□□□□□ -0.32
PRKDC-206ENST00000536429 ZMIZ1Q9ULJ6 1067 aa13.05□□□□□ -0.32
PRKDC-206ENST00000536429 KCTD3Q9Y597 815 aa13.05□□□□□ -0.32
PRKDC-206ENST00000536429 ARL5AQ9Y689 179 aa13.05□□□□□ -0.32
PRKDC-206ENST00000536429 CACNA1BQ00975 2339 aa13.05□□□□□ -0.32
PRKDC-206ENST00000536429 BPTFQ12830 3046 aa13.05□□□□□ -0.32
PRKDC-206ENST00000536429 GAPDHSO14556 408 aaPredicted RBP13.04□□□□□ -0.32
PRKDC-206ENST00000536429 LIASO43766 372 aa13.04□□□□□ -0.32
PRKDC-206ENST00000536429 EML2O95834 649 aa13.04□□□□□ -0.32
PRKDC-206ENST00000536429 ZNF8P17098 575 aaPredicted RBP13.04□□□□□ -0.32
PRKDC-206ENST00000536429 HMGCLP35914 325 aa13.04□□□□□ -0.32
PRKDC-206ENST00000536429 CYP4F3Q08477 520 aa13.04□□□□□ -0.32
PRKDC-206ENST00000536429 ILF3Q12906 894 aaKnown RBP eCLIP13.04□□□□□ -0.32
PRKDC-206ENST00000536429 MSLNQ13421 630 aaPredicted RBP13.04□□□□□ -0.32
PRKDC-206ENST00000536429 HLTFQ14527 1009 aaKnown RBP eCLIP13.04□□□□□ -0.32
PRKDC-206ENST00000536429 OASLQ15646 514 aaKnown RBP13.04□□□□□ -0.32
PRKDC-206ENST00000536429 ATP13A5Q4VNC0 1218 aa13.04□□□□□ -0.32
PRKDC-206ENST00000536429 KCTD11Q693B1 232 aa13.04□□□□□ -0.32
PRKDC-206ENST00000536429 ADGRG6Q86SQ4 1221 aa13.04□□□□□ -0.32
PRKDC-206ENST00000536429 GALNT13Q8IUC8 556 aa13.04□□□□□ -0.32
PRKDC-206ENST00000536429 NAT6Q93015 286 aa13.04□□□□□ -0.32
PRKDC-206ENST00000536429 GLYATL1Q969I3 302 aa13.04□□□□□ -0.32
PRKDC-206ENST00000536429 ALS2CR12Q96Q35 445 aa13.04□□□□□ -0.32
PRKDC-206ENST00000536429 ZSCAN5AQ9BUG6 496 aa13.04□□□□□ -0.32
PRKDC-206ENST00000536429 GSDMCQ9BYG8 508 aa13.04□□□□□ -0.32
PRKDC-206ENST00000536429 ABCG4Q9H172 646 aa13.04□□□□□ -0.32
PRKDC-206ENST00000536429 OR2AG1Q9H205 316 aa13.04□□□□□ -0.32
PRKDC-206ENST00000536429 CARD9Q9H257 536 aa13.04□□□□□ -0.32
PRKDC-206ENST00000536429 TRABDQ9H4I3 376 aa13.04□□□□□ -0.32
PRKDC-206ENST00000536429 EVA1BQ9NVM1 165 aa13.04□□□□□ -0.32
PRKDC-206ENST00000536429 ZNHIT2Q9UHR6 403 aa13.04□□□□□ -0.32
PRKDC-206ENST00000536429 RNF215Q9Y6U7 377 aa13.04□□□□□ -0.32
PRKDC-206ENST00000536429 RP1P56715 2156 aa13.04□□□□□ -0.32
PRKDC-206ENST00000536429 KMT2BQ9UMN6 2715 aaPredicted RBP13.04□□□□□ -0.32
PRKDC-206ENST00000536429 A0A1W2PNU3 283 aaPredicted RBP13.03□□□□□ -0.32
PRKDC-206ENST00000536429 A0A1W2PQM1 296 aa13.03□□□□□ -0.32
PRKDC-206ENST00000536429 UGT1A9O60656 530 aa13.03□□□□□ -0.32
PRKDC-206ENST00000536429 SLC25A14O95258 325 aaPredicted RBP13.03□□□□□ -0.32
PRKDC-206ENST00000536429 ECEL1O95672 775 aa13.03□□□□□ -0.32
PRKDC-206ENST00000536429 ETS1P14921 441 aa13.03□□□□□ -0.32
PRKDC-206ENST00000536429 UGT1A6P19224 532 aa13.03□□□□□ -0.32
PRKDC-206ENST00000536429 UGT1A1P22309 533 aa13.03□□□□□ -0.32
PRKDC-206ENST00000536429 UGT1A4P22310 534 aa13.03□□□□□ -0.32
PRKDC-206ENST00000536429 CXCR5P32302 372 aa13.03□□□□□ -0.32
PRKDC-206ENST00000536429 UGT1A3P35503 534 aa13.03□□□□□ -0.32
PRKDC-206ENST00000536429 UGT1A5P35504 534 aa13.03□□□□□ -0.32
PRKDC-206ENST00000536429 ACTR1BP42025 376 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms